RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P45-201ENST00000435986 PADI6Q6TGC4 694 aa8.71□□□□□ -1.02
HMGB1P45-201ENST00000435986 STAC3Q96MF2 364 aa8.71□□□□□ -1.02
HMGB1P45-201ENST00000435986 ZMYND15Q9H091 742 aa8.71□□□□□ -1.02
HMGB1P45-201ENST00000435986 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
HMGB1P45-201ENST00000435986 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
HMGB1P45-201ENST00000435986 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
HMGB1P45-201ENST00000435986 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P45-201ENST00000435986 MS4A1P11836 297 aa8.68□□□□□ -1.02
HMGB1P45-201ENST00000435986 PACS2Q86VP3 889 aa8.68□□□□□ -1.02
HMGB1P45-201ENST00000435986 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
HMGB1P45-201ENST00000435986 ADGRG1Q9Y653 693 aa8.68□□□□□ -1.02
HMGB1P45-201ENST00000435986 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
HMGB1P45-201ENST00000435986 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
HMGB1P45-201ENST00000435986 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
HMGB1P45-201ENST00000435986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 PTPN5P54829 565 aa8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 SKIV2LQ15477 1246 aaKnown RBP8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 HOMEZQ8IX15 550 aa8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 WNT2BQ93097 391 aa8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 FAM217BQ9NTX9 383 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P45-201ENST00000435986 NBPF26B4DH59 902 aa8.65□□□□□ -1.02
HMGB1P45-201ENST00000435986 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
HMGB1P45-201ENST00000435986 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
HMGB1P45-201ENST00000435986 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
HMGB1P45-201ENST00000435986 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
HMGB1P45-201ENST00000435986 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
HMGB1P45-201ENST00000435986 SMAPO00193 183 aa8.64□□□□□ -1.03
HMGB1P45-201ENST00000435986 TATDN2Q93075 761 aa8.64□□□□□ -1.03
HMGB1P45-201ENST00000435986 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
HMGB1P45-201ENST00000435986 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
HMGB1P45-201ENST00000435986 ANKK1Q8NFD2 765 aa8.63□□□□□ -1.03
HMGB1P45-201ENST00000435986 PHOX2BQ99453 314 aa8.63□□□□□ -1.03
HMGB1P45-201ENST00000435986 PNMA3Q9UL41 463 aa8.63□□□□□ -1.03
HMGB1P45-201ENST00000435986 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
HMGB1P45-201ENST00000435986 RSPH4AQ5TD94 716 aa8.62□□□□□ -1.03
HMGB1P45-201ENST00000435986 SOWAHBA6NEL2 793 aa8.61□□□□□ -1.03
HMGB1P45-201ENST00000435986 BCAMP50895 628 aa8.61□□□□□ -1.03
HMGB1P45-201ENST00000435986 SLC4A3P48751 1232 aa8.6□□□□□ -1.03
HMGB1P45-201ENST00000435986 EYA1Q99502 592 aa8.6□□□□□ -1.03
HMGB1P45-201ENST00000435986 DNAJB2P25686 324 aa8.59□□□□□ -1.03
HMGB1P45-201ENST00000435986 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
HMGB1P45-201ENST00000435986 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
HMGB1P45-201ENST00000435986 UBTFP17480 764 aaKnown RBP8.58□□□□□ -1.04
HMGB1P45-201ENST00000435986 RAD21O60216 631 aa8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 HDGFP51858 240 aaKnown RBP8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 SAMD7Q7Z3H4 446 aa8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
HMGB1P45-201ENST00000435986 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
HMGB1P45-201ENST00000435986 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P45-201ENST00000435986 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
HMGB1P45-201ENST00000435986 NLRP7Q8WX94 980 aa8.55□□□□□ -1.04
HMGB1P45-201ENST00000435986 WBP1LQ9NX94 342 aa8.54□□□□□ -1.04
HMGB1P45-201ENST00000435986 A6NJR5 290 aa8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 APBB1O00213 710 aa8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 TMEM259Q4ZIN3 620 aa8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 PRM3Q9NNZ6 103 aa8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 TSR3Q9UJK0 312 aaKnown RBP8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
HMGB1P45-201ENST00000435986 CD46P15529 392 aa8.52□□□□□ -1.05
HMGB1P45-201ENST00000435986 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
HMGB1P45-201ENST00000435986 RDH13Q8NBN7 331 aa8.52□□□□□ -1.05
HMGB1P45-201ENST00000435986 BANK1Q8NDB2 785 aa8.52□□□□□ -1.05
HMGB1P45-201ENST00000435986 TMEM134Q9H6X4 195 aa8.52□□□□□ -1.05
HMGB1P45-201ENST00000435986 NYAP1Q6ZVC0 841 aa8.51□□□□□ -1.05
HMGB1P45-201ENST00000435986 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
HMGB1P45-201ENST00000435986 WWC1Q8IX03 1113 aa8.51□□□□□ -1.05
HMGB1P45-201ENST00000435986 GJA5P36382 358 aa8.5□□□□□ -1.05
HMGB1P45-201ENST00000435986 USP46P62068 366 aa8.5□□□□□ -1.05
HMGB1P45-201ENST00000435986 MCM6Q14566 821 aa8.5□□□□□ -1.05
HMGB1P45-201ENST00000435986 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
HMGB1P45-201ENST00000435986 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P45-201ENST00000435986 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMGB1P45-201ENST00000435986 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
HMGB1P45-201ENST00000435986 SPIRE2Q8WWL2 714 aa8.49□□□□□ -1.05
HMGB1P45-201ENST00000435986 SPTLC1O15269 473 aa8.47□□□□□ -1.05
HMGB1P45-201ENST00000435986 RFC5P40937 340 aa8.47□□□□□ -1.05
HMGB1P45-201ENST00000435986 PPP4CP60510 307 aa8.47□□□□□ -1.05
HMGB1P45-201ENST00000435986 GRIPAP1Q4V328 841 aa8.47□□□□□ -1.05
HMGB1P45-201ENST00000435986 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
HMGB1P45-201ENST00000435986 KDM4AO75164 1064 aa8.46□□□□□ -1.06
HMGB1P45-201ENST00000435986 ITGBL1O95965 494 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P45-201ENST00000435986 PPP2R2DQ66LE6 453 aa8.46□□□□□ -1.06
HMGB1P45-201ENST00000435986 NECTIN2Q92692 538 aa8.46□□□□□ -1.06
HMGB1P45-201ENST00000435986 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 TRAK2O60296 914 aa8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 RNF40O75150 1001 aa8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P45-201ENST00000435986 APLP1P51693 650 aa8.44□□□□□ -1.06
HMGB1P45-201ENST00000435986 PROSER2Q86WR7 435 aaPredicted RBP8.44□□□□□ -1.06
HMGB1P45-201ENST00000435986 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms