RNA–Protein interactions for RNA: ENST00000435616.5

CDCA7-205, Transcript of cell division cycle associated 7, humanhuman

TSL 3

Gene CDCA7, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-205ENST00000435616 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
CDCA7-205ENST00000435616 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
CDCA7-205ENST00000435616 SLC26A8Q96RN1 970 aa20.21■□□□□ 0.83
CDCA7-205ENST00000435616 ZFYVE9O95405 1425 aa20.2■□□□□ 0.82
CDCA7-205ENST00000435616 POTEAQ6S8J7 498 aa20.2■□□□□ 0.82
CDCA7-205ENST00000435616 PHLPP1O60346 1717 aa20.18■□□□□ 0.82
CDCA7-205ENST00000435616 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
CDCA7-205ENST00000435616 CHD2O14647 1828 aaKnown RBP20.16■□□□□ 0.82
CDCA7-205ENST00000435616 DIP2AQ14689 1571 aa20.15■□□□□ 0.82
CDCA7-205ENST00000435616 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
CDCA7-205ENST00000435616 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
CDCA7-205ENST00000435616 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
CDCA7-205ENST00000435616 BCANQ96GW7 911 aa20.14■□□□□ 0.81
CDCA7-205ENST00000435616 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
CDCA7-205ENST00000435616 RIMS2Q9UQ26 1411 aa20.13■□□□□ 0.81
CDCA7-205ENST00000435616 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
CDCA7-205ENST00000435616 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.13■□□□□ 0.81
CDCA7-205ENST00000435616 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
CDCA7-205ENST00000435616 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
CDCA7-205ENST00000435616 PPP1R15AO75807 674 aaPredicted RBP20.12■□□□□ 0.81
CDCA7-205ENST00000435616 TBX22Q9Y458 520 aa20.12■□□□□ 0.81
CDCA7-205ENST00000435616 GCC2Q8IWJ2 1684 aa20.11■□□□□ 0.81
CDCA7-205ENST00000435616 AHDC1Q5TGY3 1603 aaPredicted RBP20.1■□□□□ 0.81
CDCA7-205ENST00000435616 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
CDCA7-205ENST00000435616 CADPS2Q86UW7 1296 aa20.08■□□□□ 0.81
CDCA7-205ENST00000435616 UNC13BO14795 1591 aa20.08■□□□□ 0.8
CDCA7-205ENST00000435616 MYO5BQ9ULV0 1848 aa20.07■□□□□ 0.8
CDCA7-205ENST00000435616 ZNF772Q68DY9 489 aaPredicted RBP20.07■□□□□ 0.8
CDCA7-205ENST00000435616 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
CDCA7-205ENST00000435616 DCCP43146 1447 aa20.05■□□□□ 0.8
CDCA7-205ENST00000435616 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
CDCA7-205ENST00000435616 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
CDCA7-205ENST00000435616 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
CDCA7-205ENST00000435616 TRPM2O94759 1503 aa20.03■□□□□ 0.8
CDCA7-205ENST00000435616 LRP6O75581 1613 aa20.02■□□□□ 0.8
CDCA7-205ENST00000435616 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.8
CDCA7-205ENST00000435616 ATF3P18847 181 aa20.02■□□□□ 0.8
CDCA7-205ENST00000435616 C14orf37Q86TY3 774 aa20.02■□□□□ 0.8
CDCA7-205ENST00000435616 MEX3CQ5U5Q3 659 aaKnown RBP20.01■□□□□ 0.79
CDCA7-205ENST00000435616 CDK12Q9NYV4 1490 aaPredicted RBP20■□□□□ 0.79
CDCA7-205ENST00000435616 ROCK1Q13464 1354 aa20■□□□□ 0.79
CDCA7-205ENST00000435616 IQGAP3Q86VI3 1631 aa20■□□□□ 0.79
CDCA7-205ENST00000435616 FAM50AQ14320 339 aaKnown RBP19.99■□□□□ 0.79
CDCA7-205ENST00000435616 E9PCH4 1651 aa19.99■□□□□ 0.79
CDCA7-205ENST00000435616 CHGAP10645 457 aaKnown RBP19.95■□□□□ 0.78
CDCA7-205ENST00000435616 SETD5Q9C0A6 1442 aa19.94■□□□□ 0.78
CDCA7-205ENST00000435616 UPF1Q92900 1129 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDCA7-205ENST00000435616 SETBP1Q9Y6X0 1596 aa19.94■□□□□ 0.78
CDCA7-205ENST00000435616 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
CDCA7-205ENST00000435616 BRINP3Q76B58 766 aa19.93■□□□□ 0.78
CDCA7-205ENST00000435616 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
CDCA7-205ENST00000435616 AMOTL2Q9Y2J4 779 aa19.92■□□□□ 0.78
CDCA7-205ENST00000435616 RXRBP28702 533 aa19.91■□□□□ 0.78
CDCA7-205ENST00000435616 PTPRUQ92729 1446 aa19.91■□□□□ 0.78
CDCA7-205ENST00000435616 NHSL1Q5SYE7 1610 aa19.9■□□□□ 0.78
CDCA7-205ENST00000435616 NRXN3Q9Y4C0 1643 aa19.88■□□□□ 0.77
CDCA7-205ENST00000435616 MST1RQ04912 1400 aa19.88■□□□□ 0.77
CDCA7-205ENST00000435616 NUP155O75694 1391 aa19.88■□□□□ 0.77
CDCA7-205ENST00000435616 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
CDCA7-205ENST00000435616 NUTM2DQ5VT03 806 aaPredicted RBP19.86■□□□□ 0.77
CDCA7-205ENST00000435616 LRRC59Q96AG4 307 aaKnown RBP19.86■□□□□ 0.77
CDCA7-205ENST00000435616 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
CDCA7-205ENST00000435616 AFF2P51816 1311 aa19.84■□□□□ 0.77
CDCA7-205ENST00000435616 SPHKAPQ2M3C7 1700 aa19.84■□□□□ 0.77
CDCA7-205ENST00000435616 NUTM2BA6NNL0 878 aaPredicted RBP19.81■□□□□ 0.76
CDCA7-205ENST00000435616 NUTM2EB1AL46 878 aaPredicted RBP19.81■□□□□ 0.76
CDCA7-205ENST00000435616 NUTM2AQ8IVF1 878 aaPredicted RBP19.81■□□□□ 0.76
CDCA7-205ENST00000435616 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
CDCA7-205ENST00000435616 LAMC1P11047 1609 aa19.8■□□□□ 0.76
CDCA7-205ENST00000435616 RBM6P78332 1123 aaKnown RBP19.79■□□□□ 0.76
CDCA7-205ENST00000435616 PTCH1Q13635 1447 aa19.78■□□□□ 0.76
CDCA7-205ENST00000435616 METP08581 1390 aa19.78■□□□□ 0.76
CDCA7-205ENST00000435616 RGS12O14924 1447 aa19.77■□□□□ 0.76
CDCA7-205ENST00000435616 PRAG1Q86YV5 1406 aa19.77■□□□□ 0.76
CDCA7-205ENST00000435616 ZNF326Q5BKZ1 582 aaKnown RBP19.77■□□□□ 0.76
CDCA7-205ENST00000435616 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
CDCA7-205ENST00000435616 NALCNQ8IZF0 1738 aa19.76■□□□□ 0.75
CDCA7-205ENST00000435616 SRCAPQ6ZRS2 3230 aa19.75■□□□□ 0.75
CDCA7-205ENST00000435616 NGLY1Q96IV0 654 aa19.75■□□□□ 0.75
CDCA7-205ENST00000435616 C8orf37Q96NL8 207 aa19.75■□□□□ 0.75
CDCA7-205ENST00000435616 QTRT2Q9H974 415 aaKnown RBP19.74■□□□□ 0.75
CDCA7-205ENST00000435616 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
CDCA7-205ENST00000435616 FOXD1Q16676 465 aa19.72■□□□□ 0.75
CDCA7-205ENST00000435616 CLTCL1P53675 1640 aa19.72■□□□□ 0.75
CDCA7-205ENST00000435616 ATAD2Q6PL18 1390 aa19.71■□□□□ 0.75
CDCA7-205ENST00000435616 SOS2Q07890 1332 aaPredicted RBP19.7■□□□□ 0.74
CDCA7-205ENST00000435616 KIF1BO60333 1816 aa19.69■□□□□ 0.74
CDCA7-205ENST00000435616 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
CDCA7-205ENST00000435616 COL22A1Q8NFW1 1626 aaPredicted RBP19.67■□□□□ 0.74
CDCA7-205ENST00000435616 VGFO15240 615 aaPredicted RBP19.67■□□□□ 0.74
CDCA7-205ENST00000435616 TRPC5Q9UL62 973 aaPredicted RBP19.67■□□□□ 0.74
CDCA7-205ENST00000435616 FNBP4Q8N3X1 1017 aaPredicted RBP19.65■□□□□ 0.74
CDCA7-205ENST00000435616 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
CDCA7-205ENST00000435616 RPGRIP1LQ68CZ1 1315 aa19.65■□□□□ 0.74
CDCA7-205ENST00000435616 USP21Q9UK80 565 aa19.64■□□□□ 0.73
CDCA7-205ENST00000435616 ROBO2Q9HCK4 1378 aa19.63■□□□□ 0.73
CDCA7-205ENST00000435616 ADAMTS2O95450 1211 aa19.63■□□□□ 0.73
CDCA7-205ENST00000435616 ITGAEP38570 1179 aa19.63■□□□□ 0.73
CDCA7-205ENST00000435616 CDC42BPGQ6DT37 1551 aa19.62■□□□□ 0.73
CDCA7-205ENST00000435616 ATRNO75882 1429 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms