RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
NEDD4-202ENST00000435532 ERICH6BQ5W0A0 696 aa19.49■□□□□ 0.71
NEDD4-202ENST00000435532 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
NEDD4-202ENST00000435532 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
NEDD4-202ENST00000435532 TRIM34Q9BYJ4 488 aa19.48■□□□□ 0.71
NEDD4-202ENST00000435532 E9PSI1 815 aa19.48■□□□□ 0.71
NEDD4-202ENST00000435532 CABP2Q9NPB3 220 aa19.47■□□□□ 0.71
NEDD4-202ENST00000435532 KLHL34Q8N239 644 aa19.47■□□□□ 0.71
NEDD4-202ENST00000435532 HMGB2P26583 209 aaKnown RBP19.47■□□□□ 0.71
NEDD4-202ENST00000435532 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
NEDD4-202ENST00000435532 C9orf78Q9NZ63 289 aaPredicted RBP19.46■□□□□ 0.71
NEDD4-202ENST00000435532 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
NEDD4-202ENST00000435532 HSP90B1P14625 803 aaKnown RBP19.46■□□□□ 0.71
NEDD4-202ENST00000435532 PRXQ9BXM0 1461 aa19.45■□□□□ 0.7
NEDD4-202ENST00000435532 TOMM22Q9NS69 142 aa19.45■□□□□ 0.7
NEDD4-202ENST00000435532 NUTM2GQ5VZR2 741 aa19.44■□□□□ 0.7
NEDD4-202ENST00000435532 CCDC34Q96HJ3 373 aa19.44■□□□□ 0.7
NEDD4-202ENST00000435532 CLUAP1Q96AJ1 413 aa19.43■□□□□ 0.7
NEDD4-202ENST00000435532 ZNF692Q9BU19 519 aaPredicted RBP19.43■□□□□ 0.7
NEDD4-202ENST00000435532 RIPK4P57078 832 aa19.42■□□□□ 0.7
NEDD4-202ENST00000435532 PLEKHO1Q53GL0 409 aaPredicted RBP19.42■□□□□ 0.7
NEDD4-202ENST00000435532 VPS37DQ86XT2 251 aa19.42■□□□□ 0.7
NEDD4-202ENST00000435532 ROCK1Q13464 1354 aa19.42■□□□□ 0.7
NEDD4-202ENST00000435532 CHMP4CQ96CF2 233 aa19.41■□□□□ 0.7
NEDD4-202ENST00000435532 PRAM1Q96QH2 718 aa19.41■□□□□ 0.7
NEDD4-202ENST00000435532 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
NEDD4-202ENST00000435532 PLCB2Q00722 1185 aa19.41■□□□□ 0.7
NEDD4-202ENST00000435532 NUTM2BA6NNL0 878 aaPredicted RBP19.41■□□□□ 0.7
NEDD4-202ENST00000435532 NUTM2EB1AL46 878 aaPredicted RBP19.41■□□□□ 0.7
NEDD4-202ENST00000435532 NUTM2AQ8IVF1 878 aaPredicted RBP19.41■□□□□ 0.7
NEDD4-202ENST00000435532 RBM33Q96EV2 1170 aaKnown RBP19.41■□□□□ 0.7
NEDD4-202ENST00000435532 ELL2O00472 640 aaPredicted RBP19.41■□□□□ 0.7
NEDD4-202ENST00000435532 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
NEDD4-202ENST00000435532 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
NEDD4-202ENST00000435532 PIP4K2BP78356 416 aa19.4■□□□□ 0.7
NEDD4-202ENST00000435532 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
NEDD4-202ENST00000435532 GNAI1P63096 354 aa19.4■□□□□ 0.7
NEDD4-202ENST00000435532 CTDP1Q9Y5B0 961 aaPredicted RBP19.4■□□□□ 0.7
NEDD4-202ENST00000435532 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
NEDD4-202ENST00000435532 RUNDC1Q96C34 613 aa19.4■□□□□ 0.7
NEDD4-202ENST00000435532 API5Q9BZZ5 524 aaKnown RBP19.4■□□□□ 0.7
NEDD4-202ENST00000435532 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.7
NEDD4-202ENST00000435532 CFAP70Q5T0N1 1121 aa19.39■□□□□ 0.69
NEDD4-202ENST00000435532 STRN4Q9NRL3 753 aa19.39■□□□□ 0.69
NEDD4-202ENST00000435532 EPRSP07814 1512 aaKnown RBP19.38■□□□□ 0.69
NEDD4-202ENST00000435532 GAS2L2Q8NHY3 880 aa19.38■□□□□ 0.69
NEDD4-202ENST00000435532 KIF3AQ9Y496 699 aa19.38■□□□□ 0.69
NEDD4-202ENST00000435532 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
NEDD4-202ENST00000435532 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
NEDD4-202ENST00000435532 PTMSP20962 102 aa19.37■□□□□ 0.69
NEDD4-202ENST00000435532 FBXW7Q969H0 707 aa19.37■□□□□ 0.69
NEDD4-202ENST00000435532 KIF14Q15058 1648 aa19.36■□□□□ 0.69
NEDD4-202ENST00000435532 ADGRL1O94910 1474 aa19.36■□□□□ 0.69
NEDD4-202ENST00000435532 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
NEDD4-202ENST00000435532 KIAA1107Q9UPP5 1409 aa19.35■□□□□ 0.69
NEDD4-202ENST00000435532 RTEL1-TNFRSF6BF6WH68 1400 aa19.35■□□□□ 0.69
NEDD4-202ENST00000435532 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
NEDD4-202ENST00000435532 ERBINQ96RT1 1412 aa19.34■□□□□ 0.69
NEDD4-202ENST00000435532 USP35Q9P2H5 1018 aa19.34■□□□□ 0.69
NEDD4-202ENST00000435532 CCDC141Q6ZP82 1450 aa19.34■□□□□ 0.69
NEDD4-202ENST00000435532 MARCH6O60337 910 aa19.34■□□□□ 0.69
NEDD4-202ENST00000435532 CDK19Q9BWU1 502 aa19.34■□□□□ 0.69
NEDD4-202ENST00000435532 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.69
NEDD4-202ENST00000435532 DAPK1P53355 1430 aa19.33■□□□□ 0.69
NEDD4-202ENST00000435532 TOM1L2Q6ZVM7 507 aa19.33■□□□□ 0.68
NEDD4-202ENST00000435532 FKBP5Q13451 457 aaPredicted RBP19.33■□□□□ 0.68
NEDD4-202ENST00000435532 DNTTIP2Q5QJE6 756 aaKnown RBP19.32■□□□□ 0.68
NEDD4-202ENST00000435532 KIF6Q6ZMV9 814 aa19.32■□□□□ 0.68
NEDD4-202ENST00000435532 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
NEDD4-202ENST00000435532 VPS53Q5VIR6 699 aa19.32■□□□□ 0.68
NEDD4-202ENST00000435532 L1TD1Q5T7N2 865 aaKnown RBP19.32■□□□□ 0.68
NEDD4-202ENST00000435532 SLC26A8Q96RN1 970 aa19.32■□□□□ 0.68
NEDD4-202ENST00000435532 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
NEDD4-202ENST00000435532 G3BP1Q13283 466 aaKnown RBP eCLIP19.31■□□□□ 0.68
NEDD4-202ENST00000435532 HMOX1P09601 288 aa19.31■□□□□ 0.68
NEDD4-202ENST00000435532 RASSF8Q8NHQ8 419 aa19.31■□□□□ 0.68
NEDD4-202ENST00000435532 APAF1O14727 1248 aa19.31■□□□□ 0.68
NEDD4-202ENST00000435532 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
NEDD4-202ENST00000435532 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
NEDD4-202ENST00000435532 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
NEDD4-202ENST00000435532 SYNE3Q6ZMZ3 975 aa19.31■□□□□ 0.68
NEDD4-202ENST00000435532 CHAF1AQ13111 956 aaPredicted RBP19.31■□□□□ 0.68
NEDD4-202ENST00000435532 WWC1Q8IX03 1113 aa19.31■□□□□ 0.68
NEDD4-202ENST00000435532 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
NEDD4-202ENST00000435532 NECTIN2Q92692 538 aa19.3■□□□□ 0.68
NEDD4-202ENST00000435532 CSPP1Q1MSJ5 1256 aa19.3■□□□□ 0.68
NEDD4-202ENST00000435532 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
NEDD4-202ENST00000435532 IFIT2P09913 472 aaKnown RBP19.3■□□□□ 0.68
NEDD4-202ENST00000435532 AKAP17AQ02040 695 aaKnown RBP19.3■□□□□ 0.68
NEDD4-202ENST00000435532 KIAA2012Q0VF49 1180 aa19.29■□□□□ 0.68
NEDD4-202ENST00000435532 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
NEDD4-202ENST00000435532 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
NEDD4-202ENST00000435532 CDK13Q14004 1512 aaKnown RBP19.29■□□□□ 0.68
NEDD4-202ENST00000435532 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
NEDD4-202ENST00000435532 ARHGEF11O15085 1522 aa19.29■□□□□ 0.68
NEDD4-202ENST00000435532 RBM42Q9BTD8 480 aaKnown RBP19.29■□□□□ 0.68
NEDD4-202ENST00000435532 PRDM11Q9NQV5 511 aa19.29■□□□□ 0.68
NEDD4-202ENST00000435532 CWC22Q9HCG8 908 aaKnown RBP19.28■□□□□ 0.68
NEDD4-202ENST00000435532 GBP4Q96PP9 640 aa19.28■□□□□ 0.68
NEDD4-202ENST00000435532 TIAM1Q13009 1591 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms