RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 MTA1Q13330 715 aa13.59□□□□□ -0.23
CCDC171-202ENST00000432954 PPP1R9BQ96SB3 815 aa13.59□□□□□ -0.23
CCDC171-202ENST00000432954 FEZ2Q9UHY8 353 aaPredicted RBP13.59□□□□□ -0.23
CCDC171-202ENST00000432954 RAD50Q92878 1312 aa13.58□□□□□ -0.23
CCDC171-202ENST00000432954 CCDC173Q0VFZ6 552 aa13.58□□□□□ -0.24
CCDC171-202ENST00000432954 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
CCDC171-202ENST00000432954 ANKRD23Q86SG2 305 aa13.58□□□□□ -0.24
CCDC171-202ENST00000432954 ZNF853P0CG23 659 aa13.58□□□□□ -0.24
CCDC171-202ENST00000432954 ZNF513Q8N8E2 541 aaPredicted RBP13.58□□□□□ -0.24
CCDC171-202ENST00000432954 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.24
CCDC171-202ENST00000432954 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
CCDC171-202ENST00000432954 SMG6Q86US8 1419 aaKnown RBP13.57□□□□□ -0.24
CCDC171-202ENST00000432954 BECN1Q14457 450 aa13.56□□□□□ -0.24
CCDC171-202ENST00000432954 ZBTB12Q9Y330 459 aaPredicted RBP13.56□□□□□ -0.24
CCDC171-202ENST00000432954 MNS1Q8NEH6 495 aa13.56□□□□□ -0.24
CCDC171-202ENST00000432954 GUCY2CP25092 1073 aa13.55□□□□□ -0.24
CCDC171-202ENST00000432954 ICE2Q659A1 982 aa13.55□□□□□ -0.24
CCDC171-202ENST00000432954 MED4Q9NPJ6 270 aa13.55□□□□□ -0.24
CCDC171-202ENST00000432954 TNNT3P45378 269 aaPredicted RBP13.54□□□□□ -0.24
CCDC171-202ENST00000432954 MKL1Q969V6 931 aa13.54□□□□□ -0.24
CCDC171-202ENST00000432954 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
CCDC171-202ENST00000432954 FEZ1Q99689 392 aa13.54□□□□□ -0.24
CCDC171-202ENST00000432954 SETDB1Q15047 1291 aa13.54□□□□□ -0.24
CCDC171-202ENST00000432954 FAM210AQ96ND0 272 aa13.54□□□□□ -0.24
CCDC171-202ENST00000432954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC171-202ENST00000432954 CCDC189A1A4V9 331 aa13.53□□□□□ -0.24
CCDC171-202ENST00000432954 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC171-202ENST00000432954 TDO2P48775 406 aa13.53□□□□□ -0.24
CCDC171-202ENST00000432954 MYRIPQ8NFW9 859 aa13.53□□□□□ -0.24
CCDC171-202ENST00000432954 NRDCO43847 1150 aa13.52□□□□□ -0.24
CCDC171-202ENST00000432954 CALRP27797 417 aaKnown RBP13.52□□□□□ -0.24
CCDC171-202ENST00000432954 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.24
CCDC171-202ENST00000432954 CALR3Q96L12 384 aaKnown RBP13.52□□□□□ -0.24
CCDC171-202ENST00000432954 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
CCDC171-202ENST00000432954 KLHL33A6NCF5 533 aa13.51□□□□□ -0.25
CCDC171-202ENST00000432954 SLFN14P0C7P3 912 aa13.51□□□□□ -0.25
CCDC171-202ENST00000432954 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
CCDC171-202ENST00000432954 KIF3CO14782 793 aa13.51□□□□□ -0.25
CCDC171-202ENST00000432954 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
CCDC171-202ENST00000432954 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
CCDC171-202ENST00000432954 NBPF3Q9H094 633 aa13.51□□□□□ -0.25
CCDC171-202ENST00000432954 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
CCDC171-202ENST00000432954 MCM5P33992 734 aa13.5□□□□□ -0.25
CCDC171-202ENST00000432954 ZC3H12AQ5D1E8 599 aaKnown RBP13.5□□□□□ -0.25
CCDC171-202ENST00000432954 FAM177A1Q8N128 213 aaPredicted RBP13.49□□□□□ -0.25
CCDC171-202ENST00000432954 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
CCDC171-202ENST00000432954 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CCDC171-202ENST00000432954 EXOC8Q8IYI6 725 aa13.49□□□□□ -0.25
CCDC171-202ENST00000432954 NOL7Q9UMY1 257 aaKnown RBP13.49□□□□□ -0.25
CCDC171-202ENST00000432954 HDAC1Q13547 482 aaPredicted RBP13.48□□□□□ -0.25
CCDC171-202ENST00000432954 C11orf91Q3C1V1 193 aa13.48□□□□□ -0.25
CCDC171-202ENST00000432954 SWT1Q5T5J6 900 aaKnown RBP13.48□□□□□ -0.25
CCDC171-202ENST00000432954 DNAJC14Q6Y2X3 702 aaPredicted RBP13.48□□□□□ -0.25
CCDC171-202ENST00000432954 OGFRQ9NZT2 677 aa13.48□□□□□ -0.25
CCDC171-202ENST00000432954 ARMCX6Q7L4S7 300 aa13.48□□□□□ -0.25
CCDC171-202ENST00000432954 RSPH14Q9UHP6 348 aa13.48□□□□□ -0.25
CCDC171-202ENST00000432954 IGF1RP08069 1367 aa13.48□□□□□ -0.25
CCDC171-202ENST00000432954 MPHOSPH10O00566 681 aaKnown RBP13.47□□□□□ -0.25
CCDC171-202ENST00000432954 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
CCDC171-202ENST00000432954 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
CCDC171-202ENST00000432954 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.25
CCDC171-202ENST00000432954 CEP162Q5TB80 1403 aa13.46□□□□□ -0.25
CCDC171-202ENST00000432954 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
CCDC171-202ENST00000432954 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
CCDC171-202ENST00000432954 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
CCDC171-202ENST00000432954 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
CCDC171-202ENST00000432954 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
CCDC171-202ENST00000432954 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
CCDC171-202ENST00000432954 SUFUQ9UMX1 484 aa13.45□□□□□ -0.26
CCDC171-202ENST00000432954 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
CCDC171-202ENST00000432954 KDM4AO75164 1064 aa13.44□□□□□ -0.26
CCDC171-202ENST00000432954 COQ9O75208 318 aa13.44□□□□□ -0.26
CCDC171-202ENST00000432954 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
CCDC171-202ENST00000432954 BICRAQ9NZM4 1560 aa13.44□□□□□ -0.26
CCDC171-202ENST00000432954 MCM4P33991 863 aa13.44□□□□□ -0.26
CCDC171-202ENST00000432954 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
CCDC171-202ENST00000432954 RASSF4Q9H2L5 321 aa13.43□□□□□ -0.26
CCDC171-202ENST00000432954 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
CCDC171-202ENST00000432954 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
CCDC171-202ENST00000432954 CTAGE5O15320 804 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 DNAJC21Q5F1R6 531 aaKnown RBP13.42□□□□□ -0.26
CCDC171-202ENST00000432954 ZBTB7CA1YPR0 619 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 TRAK2O60296 914 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 RBM25P49756 843 aaKnown RBP13.42□□□□□ -0.26
CCDC171-202ENST00000432954 TRDNQ13061 729 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 TERF2Q15554 542 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 CXorf56Q9H5V9 222 aa13.42□□□□□ -0.26
CCDC171-202ENST00000432954 LIG1P18858 919 aa13.41□□□□□ -0.26
CCDC171-202ENST00000432954 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
CCDC171-202ENST00000432954 GSCP56915 257 aaPredicted RBP13.41□□□□□ -0.26
CCDC171-202ENST00000432954 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
CCDC171-202ENST00000432954 PANK3Q9H999 370 aa13.41□□□□□ -0.26
CCDC171-202ENST00000432954 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
CCDC171-202ENST00000432954 C1QTNF12Q5T7M4 302 aa13.4□□□□□ -0.26
CCDC171-202ENST00000432954 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
CCDC171-202ENST00000432954 CT47B1P0C2W7 299 aaPredicted RBP13.39□□□□□ -0.27
CCDC171-202ENST00000432954 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
CCDC171-202ENST00000432954 BIRC2Q13490 618 aa13.39□□□□□ -0.27
CCDC171-202ENST00000432954 NUDCQ9Y266 331 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms