RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-203ENST00000432907 SF3A1Q15459 793 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-203ENST00000432907 REC8O95072 547 aa12.72□□□□□ -0.37
PKNOX1-203ENST00000432907 HSP90B2PQ58FF3 399 aa12.72□□□□□ -0.37
PKNOX1-203ENST00000432907 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
PKNOX1-203ENST00000432907 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
PKNOX1-203ENST00000432907 FHOD3Q2V2M9 1422 aa12.72□□□□□ -0.37
PKNOX1-203ENST00000432907 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.37
PKNOX1-203ENST00000432907 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.37
PKNOX1-203ENST00000432907 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
PKNOX1-203ENST00000432907 MBD3O95983 291 aa12.71□□□□□ -0.38
PKNOX1-203ENST00000432907 CBX1P83916 185 aa12.71□□□□□ -0.38
PKNOX1-203ENST00000432907 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 APAF1O14727 1248 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 PANK3Q9H999 370 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 KIF3AQ9Y496 699 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 CCDC7Q96M83 1385 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 KIF21BO75037 1637 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 PDCL2Q8N4E4 241 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 TSPY26PQ9H489 355 aa12.7□□□□□ -0.38
PKNOX1-203ENST00000432907 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 CREBRFQ8IUR6 639 aa12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 POLA1P09884 1462 aaPredicted RBP12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 H3BQV1 296 aa12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 IFFO2Q5TF58 517 aa12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 ACBD3Q9H3P7 528 aa12.69□□□□□ -0.38
PKNOX1-203ENST00000432907 H0YHG0 523 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 MPNDQ8N594 471 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 RILPL2Q969X0 211 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 AEBP1Q8IUX7 1158 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 LEKR1Q6ZMV7 388 aa12.68□□□□□ -0.38
PKNOX1-203ENST00000432907 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 NPHP1O15259 732 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 RDXP35241 583 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 LNPKQ9C0E8 428 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 C11orf95C9JLR9 678 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 DZIP1LQ8IYY4 767 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 USP47Q96K76 1375 aa12.67□□□□□ -0.38
PKNOX1-203ENST00000432907 SRPK2P78362 688 aaKnown RBP12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 CCDC112Q8NEF3 446 aa12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 PANK1Q8TE04 598 aa12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 A0A0G2JS52 829 aa12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 CLCN1P35523 988 aa12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 SLC4A10Q6U841 1118 aa12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 RTF1Q92541 710 aaKnown RBP12.66□□□□□ -0.38
PKNOX1-203ENST00000432907 AAMPQ13685 434 aa12.65□□□□□ -0.38
PKNOX1-203ENST00000432907 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
PKNOX1-203ENST00000432907 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
PKNOX1-203ENST00000432907 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
PKNOX1-203ENST00000432907 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
PKNOX1-203ENST00000432907 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
PKNOX1-203ENST00000432907 AK7Q96M32 723 aa12.64□□□□□ -0.39
PKNOX1-203ENST00000432907 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
PKNOX1-203ENST00000432907 TPM1P09493 284 aa12.64□□□□□ -0.39
PKNOX1-203ENST00000432907 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
PKNOX1-203ENST00000432907 NUP155O75694 1391 aa12.64□□□□□ -0.39
PKNOX1-203ENST00000432907 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 INTS3Q68E01 1043 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 SPC24Q8NBT2 197 aa12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 PTPRGP23470 1445 aa12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 XPCQ01831 940 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 DEF6Q9H4E7 631 aa12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 LETM1O95202 739 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 TSPYL1Q9H0U9 437 aa12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.63□□□□□ -0.39
PKNOX1-203ENST00000432907 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 STK31Q9BXU1 1019 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 SMC3Q9UQE7 1217 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 SAFB2Q14151 953 aaKnown RBP eCLIP12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 GORABQ5T7V8 394 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 PDZRN3Q9UPQ7 1066 aa12.62□□□□□ -0.39
PKNOX1-203ENST00000432907 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
PKNOX1-203ENST00000432907 PES1O00541 588 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-203ENST00000432907 EFCAB2Q5VUJ9 269 aa12.61□□□□□ -0.39
PKNOX1-203ENST00000432907 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
PKNOX1-203ENST00000432907 RUFY1Q96T51 708 aa12.61□□□□□ -0.39
PKNOX1-203ENST00000432907 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
PKNOX1-203ENST00000432907 CDC45O75419 566 aa12.6□□□□□ -0.39
PKNOX1-203ENST00000432907 CALCOCO1Q9P1Z2 691 aa12.6□□□□□ -0.39
PKNOX1-203ENST00000432907 ELL2O00472 640 aaPredicted RBP12.6□□□□□ -0.39
PKNOX1-203ENST00000432907 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
PKNOX1-203ENST00000432907 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
PKNOX1-203ENST00000432907 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
PKNOX1-203ENST00000432907 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
PKNOX1-203ENST00000432907 CLSTN1O94985 981 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms