RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 PROSER2Q86WR7 435 aaPredicted RBP24.68■■□□□ 1.54
AC055876.3-201ENST00000431496 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
AC055876.3-201ENST00000431496 CHGAP10645 457 aaKnown RBP24.67■■□□□ 1.54
AC055876.3-201ENST00000431496 RIMS2Q9UQ26 1411 aa24.67■■□□□ 1.54
AC055876.3-201ENST00000431496 XIRP1Q702N8 1843 aaKnown RBP24.66■■□□□ 1.54
AC055876.3-201ENST00000431496 PPP1R15AO75807 674 aaPredicted RBP24.66■■□□□ 1.54
AC055876.3-201ENST00000431496 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
AC055876.3-201ENST00000431496 PLEKHG1Q9ULL1 1385 aa24.66■■□□□ 1.54
AC055876.3-201ENST00000431496 TMEM131LA2VDJ0 1609 aa24.65■■□□□ 1.54
AC055876.3-201ENST00000431496 E9PCH4 1651 aa24.65■■□□□ 1.54
AC055876.3-201ENST00000431496 IQGAP3Q86VI3 1631 aa24.64■■□□□ 1.54
AC055876.3-201ENST00000431496 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.64■■□□□ 1.54
AC055876.3-201ENST00000431496 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
AC055876.3-201ENST00000431496 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
AC055876.3-201ENST00000431496 TBX22Q9Y458 520 aa24.62■■□□□ 1.53
AC055876.3-201ENST00000431496 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
AC055876.3-201ENST00000431496 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
AC055876.3-201ENST00000431496 FAM135BQ49AJ0 1406 aa24.59■■□□□ 1.53
AC055876.3-201ENST00000431496 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.53
AC055876.3-201ENST00000431496 NKTRP30414 1462 aaKnown RBP24.58■■□□□ 1.52
AC055876.3-201ENST00000431496 NWD1Q149M9 1564 aa24.57■■□□□ 1.52
AC055876.3-201ENST00000431496 CHD2O14647 1828 aaKnown RBP24.52■■□□□ 1.52
AC055876.3-201ENST00000431496 MSH6P52701 1360 aa24.52■■□□□ 1.52
AC055876.3-201ENST00000431496 ADAMTS13Q76LX8 1427 aa24.52■■□□□ 1.52
AC055876.3-201ENST00000431496 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
AC055876.3-201ENST00000431496 SLAIN2Q9P270 581 aa24.5■■□□□ 1.51
AC055876.3-201ENST00000431496 NAIPQ13075 1403 aa24.49■■□□□ 1.51
AC055876.3-201ENST00000431496 PIK3R4Q99570 1358 aa24.48■■□□□ 1.51
AC055876.3-201ENST00000431496 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
AC055876.3-201ENST00000431496 ZNF326Q5BKZ1 582 aaKnown RBP24.44■■□□□ 1.5
AC055876.3-201ENST00000431496 AMOTL2Q9Y2J4 779 aa24.44■■□□□ 1.5
AC055876.3-201ENST00000431496 ROBO1Q9Y6N7 1651 aa24.43■■□□□ 1.5
AC055876.3-201ENST00000431496 DIP2AQ14689 1571 aa24.43■■□□□ 1.5
AC055876.3-201ENST00000431496 C14orf37Q86TY3 774 aa24.43■■□□□ 1.5
AC055876.3-201ENST00000431496 SPHKAPQ2M3C7 1700 aa24.43■■□□□ 1.5
AC055876.3-201ENST00000431496 C19orf44Q9H6X5 657 aa24.41■■□□□ 1.5
AC055876.3-201ENST00000431496 TRIM52Q96A61 297 aa24.4■■□□□ 1.5
AC055876.3-201ENST00000431496 HFM1A2PYH4 1435 aa24.39■■□□□ 1.5
AC055876.3-201ENST00000431496 PTPRUQ92729 1446 aa24.39■■□□□ 1.5
AC055876.3-201ENST00000431496 CADPS2Q86UW7 1296 aa24.38■■□□□ 1.49
AC055876.3-201ENST00000431496 TRPM2O94759 1503 aa24.38■■□□□ 1.49
AC055876.3-201ENST00000431496 RGS17Q9UGC6 210 aaPredicted RBP24.37■■□□□ 1.49
AC055876.3-201ENST00000431496 ATF3P18847 181 aa24.36■■□□□ 1.49
AC055876.3-201ENST00000431496 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
AC055876.3-201ENST00000431496 SLC4A1APQ9BWU0 796 aaKnown RBP24.34■■□□□ 1.49
AC055876.3-201ENST00000431496 CLTCL1P53675 1640 aa24.34■■□□□ 1.49
AC055876.3-201ENST00000431496 NRXN3Q9Y4C0 1643 aa24.32■■□□□ 1.48
AC055876.3-201ENST00000431496 METP08581 1390 aa24.32■■□□□ 1.48
AC055876.3-201ENST00000431496 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.3■■□□□ 1.48
AC055876.3-201ENST00000431496 NEXMIFQ5QGS0 1516 aa24.29■■□□□ 1.48
AC055876.3-201ENST00000431496 JCADQ9P266 1359 aa24.29■■□□□ 1.48
AC055876.3-201ENST00000431496 PHLPP1O60346 1717 aa24.28■■□□□ 1.48
AC055876.3-201ENST00000431496 VGFO15240 615 aaPredicted RBP24.28■■□□□ 1.48
AC055876.3-201ENST00000431496 KIF1BO60333 1816 aa24.27■■□□□ 1.48
AC055876.3-201ENST00000431496 RPGRIP1LQ68CZ1 1315 aa24.26■■□□□ 1.47
AC055876.3-201ENST00000431496 XRN1Q8IZH2 1706 aaKnown RBP24.25■■□□□ 1.47
AC055876.3-201ENST00000431496 BRINP3Q76B58 766 aa24.24■■□□□ 1.47
AC055876.3-201ENST00000431496 POTEAQ6S8J7 498 aa24.23■■□□□ 1.47
AC055876.3-201ENST00000431496 DCCP43146 1447 aa24.23■■□□□ 1.47
AC055876.3-201ENST00000431496 FOXD1Q16676 465 aa24.22■■□□□ 1.47
AC055876.3-201ENST00000431496 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
AC055876.3-201ENST00000431496 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
AC055876.3-201ENST00000431496 SPATA31A6Q5VVP1 1343 aa24.18■■□□□ 1.46
AC055876.3-201ENST00000431496 MPHOSPH9Q99550 1183 aa24.18■■□□□ 1.46
AC055876.3-201ENST00000431496 MST1RQ04912 1400 aa24.17■■□□□ 1.46
AC055876.3-201ENST00000431496 ADGRL3Q9HAR2 1447 aa24.16■■□□□ 1.46
AC055876.3-201ENST00000431496 ROBO2Q9HCK4 1378 aa24.12■■□□□ 1.45
AC055876.3-201ENST00000431496 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
AC055876.3-201ENST00000431496 ASXL1Q8IXJ9 1541 aa24.11■■□□□ 1.45
AC055876.3-201ENST00000431496 RGL3Q3MIN7 710 aa24.11■■□□□ 1.45
AC055876.3-201ENST00000431496 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
AC055876.3-201ENST00000431496 LRP6O75581 1613 aa24.1■■□□□ 1.45
AC055876.3-201ENST00000431496 PPLO60437 1756 aa24.09■■□□□ 1.45
AC055876.3-201ENST00000431496 MEX3CQ5U5Q3 659 aaKnown RBP24.09■■□□□ 1.45
AC055876.3-201ENST00000431496 LRRC59Q96AG4 307 aaKnown RBP24.09■■□□□ 1.45
AC055876.3-201ENST00000431496 SETD1AO15047 1707 aaKnown RBP24.09■■□□□ 1.45
AC055876.3-201ENST00000431496 ADGRF5Q8IZF2 1346 aa24.09■■□□□ 1.45
AC055876.3-201ENST00000431496 ACIN1Q9UKV3 1341 aaKnown RBP24.09■■□□□ 1.45
AC055876.3-201ENST00000431496 SETD5Q9C0A6 1442 aa24.08■■□□□ 1.44
AC055876.3-201ENST00000431496 DDX17Q92841 729 aaKnown RBP24.07■■□□□ 1.44
AC055876.3-201ENST00000431496 SHPRHQ149N8 1683 aa24.07■■□□□ 1.44
AC055876.3-201ENST00000431496 SPATA31E1Q6ZUB1 1445 aa24.07■■□□□ 1.44
AC055876.3-201ENST00000431496 PRAG1Q86YV5 1406 aa24.07■■□□□ 1.44
AC055876.3-201ENST00000431496 NALCNQ8IZF0 1738 aa24.06■■□□□ 1.44
AC055876.3-201ENST00000431496 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
AC055876.3-201ENST00000431496 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
AC055876.3-201ENST00000431496 ZNF772Q68DY9 489 aaPredicted RBP24.05■■□□□ 1.44
AC055876.3-201ENST00000431496 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
AC055876.3-201ENST00000431496 C1orf167Q5SNV9 1468 aa24.05■■□□□ 1.44
AC055876.3-201ENST00000431496 ANKRD30BQ9BXX2 1392 aa24.04■■□□□ 1.44
AC055876.3-201ENST00000431496 NHSL1Q5SYE7 1610 aa24.02■■□□□ 1.44
AC055876.3-201ENST00000431496 ORAI2Q96SN7 254 aa24.02■■□□□ 1.44
AC055876.3-201ENST00000431496 STK26Q9P289 416 aa23.99■■□□□ 1.43
AC055876.3-201ENST00000431496 TMEM132EQ6IEE7 984 aa23.97■■□□□ 1.43
AC055876.3-201ENST00000431496 PNPLA6Q8IY17 1366 aa23.97■■□□□ 1.43
AC055876.3-201ENST00000431496 LRPPRCP42704 1394 aaKnown RBP23.96■■□□□ 1.43
AC055876.3-201ENST00000431496 SOS2Q07890 1332 aaPredicted RBP23.96■■□□□ 1.43
AC055876.3-201ENST00000431496 WAPLQ7Z5K2 1190 aa23.96■■□□□ 1.43
AC055876.3-201ENST00000431496 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
AC055876.3-201ENST00000431496 TECPR2O15040 1411 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms