RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MYBBP1AQ9BQG0 1328 aaKnown RBP19.05■□□□□ 0.64
HOXC4-202ENST00000430889 PPLO60437 1756 aa19.05■□□□□ 0.64
HOXC4-202ENST00000430889 SIGLEC1Q9BZZ2 1709 aa19.04■□□□□ 0.64
HOXC4-202ENST00000430889 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
HOXC4-202ENST00000430889 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
HOXC4-202ENST00000430889 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
HOXC4-202ENST00000430889 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
HOXC4-202ENST00000430889 MYOM1P52179 1685 aa19.03■□□□□ 0.64
HOXC4-202ENST00000430889 NEFLP07196 543 aa19.03■□□□□ 0.64
HOXC4-202ENST00000430889 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
HOXC4-202ENST00000430889 PIK3C2BO00750 1634 aa19.02■□□□□ 0.64
HOXC4-202ENST00000430889 SYNMO15061 1565 aa19.02■□□□□ 0.64
HOXC4-202ENST00000430889 TMF1P82094 1093 aa19.02■□□□□ 0.64
HOXC4-202ENST00000430889 ZC3H13Q5T200 1668 aaKnown RBP19.02■□□□□ 0.63
HOXC4-202ENST00000430889 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
HOXC4-202ENST00000430889 NOS1P29475 1434 aa18.99■□□□□ 0.63
HOXC4-202ENST00000430889 CFAP65Q6ZU64 1925 aaKnown RBP18.99■□□□□ 0.63
HOXC4-202ENST00000430889 ZMYM4Q5VZL5 1548 aa18.98■□□□□ 0.63
HOXC4-202ENST00000430889 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
HOXC4-202ENST00000430889 DIP2BQ9P265 1576 aa18.97■□□□□ 0.63
HOXC4-202ENST00000430889 KDM5AP29375 1690 aaKnown RBP18.96■□□□□ 0.63
HOXC4-202ENST00000430889 ADGRF5Q8IZF2 1346 aa18.96■□□□□ 0.63
HOXC4-202ENST00000430889 BCANQ96GW7 911 aa18.96■□□□□ 0.63
HOXC4-202ENST00000430889 ARHGAP31Q2M1Z3 1444 aa18.96■□□□□ 0.63
HOXC4-202ENST00000430889 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
HOXC4-202ENST00000430889 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
HOXC4-202ENST00000430889 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
HOXC4-202ENST00000430889 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
HOXC4-202ENST00000430889 PANK3Q9H999 370 aa18.95■□□□□ 0.62
HOXC4-202ENST00000430889 INSRP06213 1382 aa18.94■□□□□ 0.62
HOXC4-202ENST00000430889 PIK3C2GO75747 1445 aa18.93■□□□□ 0.62
HOXC4-202ENST00000430889 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
HOXC4-202ENST00000430889 YEATS2Q9ULM3 1422 aa18.93■□□□□ 0.62
HOXC4-202ENST00000430889 ADGRB1O14514 1584 aa18.92■□□□□ 0.62
HOXC4-202ENST00000430889 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
HOXC4-202ENST00000430889 ERVK-7P63135 1459 aa18.92■□□□□ 0.62
HOXC4-202ENST00000430889 SBNO2Q9Y2G9 1366 aa18.92■□□□□ 0.62
HOXC4-202ENST00000430889 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
HOXC4-202ENST00000430889 GGT6Q6P531 493 aa18.9■□□□□ 0.62
HOXC4-202ENST00000430889 CDCA8Q53HL2 280 aa18.89■□□□□ 0.61
HOXC4-202ENST00000430889 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
HOXC4-202ENST00000430889 REREQ9P2R6 1566 aa18.89■□□□□ 0.61
HOXC4-202ENST00000430889 TSHZ2Q9NRE2 1034 aa18.88■□□□□ 0.61
HOXC4-202ENST00000430889 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
HOXC4-202ENST00000430889 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
HOXC4-202ENST00000430889 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
HOXC4-202ENST00000430889 PREX1Q8TCU6 1659 aa18.87■□□□□ 0.61
HOXC4-202ENST00000430889 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
HOXC4-202ENST00000430889 ASXL1Q8IXJ9 1541 aa18.87■□□□□ 0.61
HOXC4-202ENST00000430889 BLMP54132 1417 aaPredicted RBP18.87■□□□□ 0.61
HOXC4-202ENST00000430889 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
HOXC4-202ENST00000430889 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
HOXC4-202ENST00000430889 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
HOXC4-202ENST00000430889 SLC24A1O60721 1099 aa18.85■□□□□ 0.61
HOXC4-202ENST00000430889 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
HOXC4-202ENST00000430889 C14orf93Q9H972 538 aaKnown RBP18.84■□□□□ 0.61
HOXC4-202ENST00000430889 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.61
HOXC4-202ENST00000430889 AGLP35573 1532 aa18.82■□□□□ 0.6
HOXC4-202ENST00000430889 TSPOAP1O95153 1857 aa18.82■□□□□ 0.6
HOXC4-202ENST00000430889 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
HOXC4-202ENST00000430889 TMEM131LA2VDJ0 1609 aa18.81■□□□□ 0.6
HOXC4-202ENST00000430889 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
HOXC4-202ENST00000430889 ZFYVE9O95405 1425 aa18.8■□□□□ 0.6
HOXC4-202ENST00000430889 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.6
HOXC4-202ENST00000430889 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
HOXC4-202ENST00000430889 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.6
HOXC4-202ENST00000430889 PPP4R2Q9NY27 417 aa18.76■□□□□ 0.59
HOXC4-202ENST00000430889 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
HOXC4-202ENST00000430889 CHGAP10645 457 aaKnown RBP18.76■□□□□ 0.59
HOXC4-202ENST00000430889 PPP2R1AP30153 589 aa18.76■□□□□ 0.59
HOXC4-202ENST00000430889 USP32Q8NFA0 1604 aa18.74■□□□□ 0.59
HOXC4-202ENST00000430889 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
HOXC4-202ENST00000430889 IDI1Q13907 227 aa18.73■□□□□ 0.59
HOXC4-202ENST00000430889 PDE3BQ13370 1112 aa18.73■□□□□ 0.59
HOXC4-202ENST00000430889 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
HOXC4-202ENST00000430889 ARHGEF40Q8TER5 1519 aa18.7■□□□□ 0.58
HOXC4-202ENST00000430889 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
HOXC4-202ENST00000430889 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
HOXC4-202ENST00000430889 CLTCQ00610 1675 aaKnown RBP18.7■□□□□ 0.58
HOXC4-202ENST00000430889 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
HOXC4-202ENST00000430889 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
HOXC4-202ENST00000430889 TRAK1Q9UPV9 953 aa18.69■□□□□ 0.58
HOXC4-202ENST00000430889 PUS7Q96PZ0 661 aaKnown RBP18.68■□□□□ 0.58
HOXC4-202ENST00000430889 PPP6R1Q9UPN7 881 aa18.68■□□□□ 0.58
HOXC4-202ENST00000430889 TMEM132EQ6IEE7 984 aa18.67■□□□□ 0.58
HOXC4-202ENST00000430889 ADAMTS8Q9UP79 889 aa18.65■□□□□ 0.58
HOXC4-202ENST00000430889 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
HOXC4-202ENST00000430889 PTPRMP28827 1452 aa18.63■□□□□ 0.57
HOXC4-202ENST00000430889 SHPRHQ149N8 1683 aa18.62■□□□□ 0.57
HOXC4-202ENST00000430889 NSD3Q9BZ95 1437 aa18.62■□□□□ 0.57
HOXC4-202ENST00000430889 ALKQ9UM73 1620 aa18.62■□□□□ 0.57
HOXC4-202ENST00000430889 ZNF521Q96K83 1311 aa18.61■□□□□ 0.57
HOXC4-202ENST00000430889 FBXO31Q5XUX0 539 aaPredicted RBP18.61■□□□□ 0.57
HOXC4-202ENST00000430889 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
HOXC4-202ENST00000430889 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
HOXC4-202ENST00000430889 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
HOXC4-202ENST00000430889 POLR3AO14802 1390 aaPredicted RBP18.59■□□□□ 0.57
HOXC4-202ENST00000430889 RRP1P56182 461 aaKnown RBP18.59■□□□□ 0.57
HOXC4-202ENST00000430889 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
HOXC4-202ENST00000430889 A2ML1A8K2U0 1454 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms