RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 CPLX2Q6PUV4 134 aaKnown RBP5.61□□□□□ -1.51
LRRK2-204ENST00000430804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.61□□□□□ -1.51
LRRK2-204ENST00000430804 EXOC5O00471 708 aa5.61□□□□□ -1.51
LRRK2-204ENST00000430804 NGEFQ8N5V2 710 aa5.61□□□□□ -1.51
LRRK2-204ENST00000430804 CCDC47Q96A33 483 aaKnown RBP5.61□□□□□ -1.51
LRRK2-204ENST00000430804 TRAK1Q9UPV9 953 aa5.61□□□□□ -1.51
LRRK2-204ENST00000430804 MINK1Q8N4C8 1332 aaPredicted RBP5.61□□□□□ -1.51
LRRK2-204ENST00000430804 HNRNPUQ00839 825 aaKnown RBP eCLIP5.61□□□□□ -1.51
LRRK2-204ENST00000430804 DDX54Q8TDD1 881 aaKnown RBP5.6□□□□□ -1.51
LRRK2-204ENST00000430804 C8orf37Q96NL8 207 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 PRG4Q92954 1404 aaPredicted RBP5.6□□□□□ -1.51
LRRK2-204ENST00000430804 GRIN2BQ13224 1484 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 CABP4P57796 275 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 SLC52A1Q9NWF4 448 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 RAB3GAP2Q9H2M9 1393 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 ERICH2A1L162 156 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 MYCNP04198 464 aaPredicted RBP5.6□□□□□ -1.51
LRRK2-204ENST00000430804 A0A087WZG4 1122 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 KIF22Q14807 665 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 JDP2Q8WYK2 163 aa5.6□□□□□ -1.51
LRRK2-204ENST00000430804 HIRIP3Q9BW71 556 aaPredicted RBP5.59□□□□□ -1.51
LRRK2-204ENST00000430804 C9orf78Q9NZ63 289 aaPredicted RBP5.59□□□□□ -1.51
LRRK2-204ENST00000430804 GAPVD1Q14C86 1478 aa5.59□□□□□ -1.51
LRRK2-204ENST00000430804 ARHGAP35Q9NRY4 1499 aa5.59□□□□□ -1.51
LRRK2-204ENST00000430804 NBR1Q14596 966 aa5.59□□□□□ -1.51
LRRK2-204ENST00000430804 FRAT1Q92837 279 aaPredicted RBP5.59□□□□□ -1.51
LRRK2-204ENST00000430804 SYNJ2O15056 1496 aa5.59□□□□□ -1.51
LRRK2-204ENST00000430804 STARD3NLO95772 234 aa5.59□□□□□ -1.51
LRRK2-204ENST00000430804 CC2D1BQ5T0F9 858 aaKnown RBP5.59□□□□□ -1.51
LRRK2-204ENST00000430804 ZSCAN29Q8IWY8 852 aaPredicted RBP5.59□□□□□ -1.51
LRRK2-204ENST00000430804 KCNH5Q8NCM2 988 aa5.59□□□□□ -1.51
LRRK2-204ENST00000430804 RPGRQ92834 1020 aaKnown RBP5.59□□□□□ -1.52
LRRK2-204ENST00000430804 ROCK2O75116 1388 aaKnown RBP5.58□□□□□ -1.52
LRRK2-204ENST00000430804 LRRC59Q96AG4 307 aaKnown RBP5.58□□□□□ -1.52
LRRK2-204ENST00000430804 HDAC9Q9UKV0 1011 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 CCDC27Q2M243 656 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 ST5P78524 1137 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 DPY19L2Q6NUT2 758 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 VTI1AQ96AJ9 217 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 HRCP23327 699 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 CGNL1Q0VF96 1302 aa5.58□□□□□ -1.52
LRRK2-204ENST00000430804 WDR78Q5VTH9 848 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 CCDC136Q96JN2 1154 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 PARP3Q9Y6F1 533 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 LPXNO60711 386 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 TPM2P07951 284 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 TRDNQ13061 729 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 SMARCC1Q92922 1105 aaPredicted RBP5.57□□□□□ -1.52
LRRK2-204ENST00000430804 PLEKHH2Q8IVE3 1493 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 SLC4A3P48751 1232 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 TBC1D2BQ9UPU7 963 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 RAPGEF2Q9Y4G8 1499 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 SLC4A10Q6U841 1118 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 RIC3Q7Z5B4 369 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 SLF2Q8IX21 1173 aa5.57□□□□□ -1.52
LRRK2-204ENST00000430804 ZNF692Q9BU19 519 aaPredicted RBP5.57□□□□□ -1.52
LRRK2-204ENST00000430804 APPP05067 770 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 RXRBP28702 533 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 NOC3LQ8WTT2 800 aaKnown RBP5.56□□□□□ -1.52
LRRK2-204ENST00000430804 WDR70Q9NW82 654 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 CCDC144AA2RUR9 1427 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 FAM177BA6PVY3 158 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 ZBTB24O43167 697 aaPredicted RBP5.56□□□□□ -1.52
LRRK2-204ENST00000430804 RFC4P35249 363 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 ZNF622Q969S3 477 aaKnown RBP eCLIP5.56□□□□□ -1.52
LRRK2-204ENST00000430804 TPM4P67936 248 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 TCIRG1Q13488 830 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 ATF7IPQ6VMQ6 1270 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 DRC1Q96MC2 740 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 B4DLN1 442 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 EIF2S2P20042 333 aaKnown RBP5.56□□□□□ -1.52
LRRK2-204ENST00000430804 MRPL12P52815 198 aaKnown RBP5.56□□□□□ -1.52
LRRK2-204ENST00000430804 TMOD3Q9NYL9 352 aa5.56□□□□□ -1.52
LRRK2-204ENST00000430804 DDX10Q13206 875 aaKnown RBP5.55□□□□□ -1.52
LRRK2-204ENST00000430804 PNISRQ8TF01 805 aaKnown RBP5.55□□□□□ -1.52
LRRK2-204ENST00000430804 PHLDB1Q86UU1 1377 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 MYO15BQ96JP2 1530 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 ATAD2BQ9ULI0 1458 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 PTMAP06454 111 aaKnown RBP5.55□□□□□ -1.52
LRRK2-204ENST00000430804 TFCP2L1Q9NZI6 479 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 PRKAG2Q9UGJ0 569 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 CD109Q6YHK3 1445 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 SART3Q15020 963 aaKnown RBP5.55□□□□□ -1.52
LRRK2-204ENST00000430804 OTUD7BQ6GQQ9 843 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 NOL8Q76FK4 1167 aaKnown RBP5.55□□□□□ -1.52
LRRK2-204ENST00000430804 TRIM29Q14134 588 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 GAS2L2Q8NHY3 880 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 DNAJC5Q9H3Z4 198 aa5.55□□□□□ -1.52
LRRK2-204ENST00000430804 APBB1O00213 710 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 G3BP1Q13283 466 aaKnown RBP eCLIP5.54□□□□□ -1.52
LRRK2-204ENST00000430804 MPHOSPH8Q99549 860 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 KTN1Q86UP2 1357 aaKnown RBP5.54□□□□□ -1.52
LRRK2-204ENST00000430804 DCAF1Q9Y4B6 1507 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 HSP90AB4PQ58FF6 505 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 NUTM2GQ5VZR2 741 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 SCLT1Q96NL6 688 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 BMS1Q14692 1282 aaKnown RBP5.54□□□□□ -1.52
LRRK2-204ENST00000430804 OGFOD1Q8N543 542 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 HOOK2Q96ED9 719 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 DESP17661 470 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms