RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MYOM2P54296 1465 aa15.93■□□□□ 0.14
CHD4-202ENST00000430771 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
CHD4-202ENST00000430771 RPGRIP1LQ68CZ1 1315 aa15.93■□□□□ 0.14
CHD4-202ENST00000430771 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
CHD4-202ENST00000430771 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
CHD4-202ENST00000430771 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
CHD4-202ENST00000430771 RGL3Q3MIN7 710 aa15.89■□□□□ 0.13
CHD4-202ENST00000430771 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHD4-202ENST00000430771 LAMC1P11047 1609 aa15.88■□□□□ 0.13
CHD4-202ENST00000430771 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
CHD4-202ENST00000430771 IQGAP1P46940 1657 aa15.88■□□□□ 0.13
CHD4-202ENST00000430771 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
CHD4-202ENST00000430771 STAC3Q96MF2 364 aa15.87■□□□□ 0.13
CHD4-202ENST00000430771 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
CHD4-202ENST00000430771 NRXN1Q9ULB1 1477 aa15.86■□□□□ 0.13
CHD4-202ENST00000430771 DIP2AQ14689 1571 aa15.86■□□□□ 0.13
CHD4-202ENST00000430771 SETBP1Q9Y6X0 1596 aa15.86■□□□□ 0.13
CHD4-202ENST00000430771 ANKLE2Q86XL3 938 aa15.85■□□□□ 0.13
CHD4-202ENST00000430771 PLEKHG1Q9ULL1 1385 aa15.85■□□□□ 0.13
CHD4-202ENST00000430771 MED14O60244 1454 aa15.84■□□□□ 0.13
CHD4-202ENST00000430771 VGFO15240 615 aaPredicted RBP15.84■□□□□ 0.13
CHD4-202ENST00000430771 HSPA2P54652 639 aa15.84■□□□□ 0.13
CHD4-202ENST00000430771 STRCQ7RTU9 1775 aa15.84■□□□□ 0.13
CHD4-202ENST00000430771 PIK3C2GO75747 1445 aa15.84■□□□□ 0.13
CHD4-202ENST00000430771 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
CHD4-202ENST00000430771 KIAA1210Q9ULL0 1709 aa15.83■□□□□ 0.13
CHD4-202ENST00000430771 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.12
CHD4-202ENST00000430771 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
CHD4-202ENST00000430771 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
CHD4-202ENST00000430771 NPHP4O75161 1426 aaPredicted RBP15.83■□□□□ 0.12
CHD4-202ENST00000430771 PRAG1Q86YV5 1406 aa15.82■□□□□ 0.12
CHD4-202ENST00000430771 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
CHD4-202ENST00000430771 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
CHD4-202ENST00000430771 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
CHD4-202ENST00000430771 LTKP29376 864 aa15.79■□□□□ 0.12
CHD4-202ENST00000430771 ADGRF5Q8IZF2 1346 aa15.78■□□□□ 0.12
CHD4-202ENST00000430771 KDM2AQ9Y2K7 1162 aa15.78■□□□□ 0.12
CHD4-202ENST00000430771 ALKQ9UM73 1620 aa15.78■□□□□ 0.12
CHD4-202ENST00000430771 NCKAP5LQ9HCH0 1330 aa15.77■□□□□ 0.12
CHD4-202ENST00000430771 BCANQ96GW7 911 aa15.77■□□□□ 0.12
CHD4-202ENST00000430771 ADAMTS13Q76LX8 1427 aa15.77■□□□□ 0.11
CHD4-202ENST00000430771 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
CHD4-202ENST00000430771 ZEB1P37275 1124 aaPredicted RBP15.75■□□□□ 0.11
CHD4-202ENST00000430771 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
CHD4-202ENST00000430771 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
CHD4-202ENST00000430771 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
CHD4-202ENST00000430771 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
CHD4-202ENST00000430771 ADGRB1O14514 1584 aa15.72■□□□□ 0.11
CHD4-202ENST00000430771 PIK3R4Q99570 1358 aa15.72■□□□□ 0.11
CHD4-202ENST00000430771 XRN1Q8IZH2 1706 aaKnown RBP15.71■□□□□ 0.11
CHD4-202ENST00000430771 C14orf93Q9H972 538 aaKnown RBP15.7■□□□□ 0.1
CHD4-202ENST00000430771 ROCK2O75116 1388 aaKnown RBP15.7■□□□□ 0.1
CHD4-202ENST00000430771 CHD2O14647 1828 aaKnown RBP15.7■□□□□ 0.1
CHD4-202ENST00000430771 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
CHD4-202ENST00000430771 TBX22Q9Y458 520 aa15.69■□□□□ 0.1
CHD4-202ENST00000430771 CPS1P31327 1500 aa15.68■□□□□ 0.1
CHD4-202ENST00000430771 NKTRP30414 1462 aaKnown RBP15.68■□□□□ 0.1
CHD4-202ENST00000430771 GPRASP1Q5JY77 1395 aa15.68■□□□□ 0.1
CHD4-202ENST00000430771 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
CHD4-202ENST00000430771 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
CHD4-202ENST00000430771 NBPF8Q3BBV2 869 aa15.67■□□□□ 0.1
CHD4-202ENST00000430771 ARHGEF28Q8N1W1 1705 aaKnown RBP15.66■□□□□ 0.1
CHD4-202ENST00000430771 METP08581 1390 aa15.66■□□□□ 0.1
CHD4-202ENST00000430771 DLC1Q96QB1 1528 aa15.66■□□□□ 0.1
CHD4-202ENST00000430771 PTCH1Q13635 1447 aa15.66■□□□□ 0.1
CHD4-202ENST00000430771 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
CHD4-202ENST00000430771 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
CHD4-202ENST00000430771 TECPR2O15040 1411 aa15.65■□□□□ 0.1
CHD4-202ENST00000430771 EIF3AQ14152 1382 aaKnown RBP15.64■□□□□ 0.09
CHD4-202ENST00000430771 STRCP1A6NGW2 1772 aa15.62■□□□□ 0.09
CHD4-202ENST00000430771 PTPRUQ92729 1446 aa15.62■□□□□ 0.09
CHD4-202ENST00000430771 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
CHD4-202ENST00000430771 ABCC11Q96J66 1382 aa15.61■□□□□ 0.09
CHD4-202ENST00000430771 KCNA6P17658 529 aa15.6■□□□□ 0.09
CHD4-202ENST00000430771 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
CHD4-202ENST00000430771 TMEM132EQ6IEE7 984 aa15.6■□□□□ 0.09
CHD4-202ENST00000430771 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
CHD4-202ENST00000430771 QRICH2Q9H0J4 1663 aa15.59■□□□□ 0.09
CHD4-202ENST00000430771 AMOTL2Q9Y2J4 779 aa15.58■□□□□ 0.08
CHD4-202ENST00000430771 USP47Q96K76 1375 aa15.58■□□□□ 0.08
CHD4-202ENST00000430771 ZNF335Q9H4Z2 1342 aaPredicted RBP15.57■□□□□ 0.08
CHD4-202ENST00000430771 STK26Q9P289 416 aa15.56■□□□□ 0.08
CHD4-202ENST00000430771 ROBO2Q9HCK4 1378 aa15.56■□□□□ 0.08
CHD4-202ENST00000430771 LTBP4Q8N2S1 1624 aa15.56■□□□□ 0.08
CHD4-202ENST00000430771 NALCNQ8IZF0 1738 aa15.55■□□□□ 0.08
CHD4-202ENST00000430771 ADGRB2O60241 1585 aa15.55■□□□□ 0.08
CHD4-202ENST00000430771 TRAK1Q9UPV9 953 aa15.55■□□□□ 0.08
CHD4-202ENST00000430771 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
CHD4-202ENST00000430771 LRRC7Q96NW7 1537 aa15.53■□□□□ 0.08
CHD4-202ENST00000430771 NCOA3Q9Y6Q9 1424 aa15.53■□□□□ 0.08
CHD4-202ENST00000430771 ADGRL3Q9HAR2 1447 aa15.52■□□□□ 0.08
CHD4-202ENST00000430771 XIRP1Q702N8 1843 aaKnown RBP15.52■□□□□ 0.08
CHD4-202ENST00000430771 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.08
CHD4-202ENST00000430771 POGKQ9P215 609 aa15.52■□□□□ 0.08
CHD4-202ENST00000430771 CDC42BPGQ6DT37 1551 aa15.52■□□□□ 0.07
CHD4-202ENST00000430771 SBNO2Q9Y2G9 1366 aa15.51■□□□□ 0.07
CHD4-202ENST00000430771 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHD4-202ENST00000430771 PRAM1Q96QH2 718 aa15.51■□□□□ 0.07
CHD4-202ENST00000430771 TMEM94Q12767 1356 aa15.5■□□□□ 0.07
CHD4-202ENST00000430771 PLEKHH1Q9ULM0 1364 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms