RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 POLR1AO95602 1720 aaPredicted RBP9.22□□□□□ -0.93
SYNPO2-202ENST00000429713 FEZ1Q99689 392 aa9.21□□□□□ -0.93
SYNPO2-202ENST00000429713 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.93
SYNPO2-202ENST00000429713 FGD1P98174 961 aa9.21□□□□□ -0.93
SYNPO2-202ENST00000429713 TUBB4BP68371 445 aa9.21□□□□□ -0.93
SYNPO2-202ENST00000429713 TIGD1Q96MW7 591 aa9.21□□□□□ -0.93
SYNPO2-202ENST00000429713 KIAA1211Q6ZU35 1233 aa9.21□□□□□ -0.94
SYNPO2-202ENST00000429713 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
SYNPO2-202ENST00000429713 HMGB1P1B2RPK0 211 aaPredicted RBP9.21□□□□□ -0.94
SYNPO2-202ENST00000429713 CCDC34Q96HJ3 373 aa9.21□□□□□ -0.94
SYNPO2-202ENST00000429713 FGD5Q6ZNL6 1462 aa9.21□□□□□ -0.94
SYNPO2-202ENST00000429713 SCAPERQ9BY12 1400 aa9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 CLSTN1O94985 981 aa9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 NBPF1Q3BBV0 1214 aa9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 CAVIN2O95810 425 aa9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 TACO1Q9BSH4 297 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 GABPB1Q06547 395 aaPredicted RBP9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 HMGXB3Q12766 1538 aa9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 TPRNQ4KMQ1 711 aa9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 VIRMAQ69YN4 1812 aaKnown RBP9.2□□□□□ -0.94
SYNPO2-202ENST00000429713 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 LAMC3Q9Y6N6 1575 aa9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 KANK1Q14678 1352 aa9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 POLR3GO15318 223 aaPredicted RBP9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.19□□□□□ -0.94
SYNPO2-202ENST00000429713 BRD4O60885 1362 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 MYOM3Q5VTT5 1437 aa9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 SASS6Q6UVJ0 657 aa9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 CCDC94Q9BW85 323 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 RBM25P49756 843 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 U2SURPO15042 1029 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 IPO4Q8TEX9 1081 aaKnown RBP9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 CCDC7Q96M83 1385 aa9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 CEP120Q8N960 986 aa9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 V9GYY5 206 aaPredicted RBP9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 AK9Q5TCS8 1911 aa9.18□□□□□ -0.94
SYNPO2-202ENST00000429713 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 INSRP06213 1382 aa9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 ST18O60284 1047 aa9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 ERCC4Q92889 916 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 PLCB2Q00722 1185 aa9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 SENP3Q9H4L4 574 aaPredicted RBP9.17□□□□□ -0.94
SYNPO2-202ENST00000429713 DDX11Q96FC9 970 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 CASKIN1Q8WXD9 1431 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 NCAPD3P42695 1498 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 SETSIPP0DME0 302 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 KIF7Q2M1P5 1343 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 HSP90B2PQ58FF3 399 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 MORC1Q86VD1 984 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 MIA2Q96PC5 1412 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 RDXP35241 583 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 CARMIL2Q6F5E8 1435 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 PLIN1O60240 522 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 CCDC70Q6NSX1 233 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
SYNPO2-202ENST00000429713 HMMRO75330 724 aa9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 CHMP4AQ9BY43 222 aa9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 CRBNQ96SW2 442 aa9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 NCOA2Q15596 1464 aa9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 RBM10P98175 930 aaKnown RBP9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 EXOC6Q8TAG9 804 aa9.15□□□□□ -0.94
SYNPO2-202ENST00000429713 CAGE1Q8TC20 777 aa9.15□□□□□ -0.95
SYNPO2-202ENST00000429713 ST20-MTHFSA0A0A6YYL1 179 aa9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 RABEP1Q15276 862 aa9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 IVLP07476 585 aa9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 LEKR1Q6ZMV7 388 aa9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 ITPRIPQ8IWB1 547 aa9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 SH3BGRP55822 239 aaPredicted RBP9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 CGNQ9P2M7 1197 aaKnown RBP9.14□□□□□ -0.95
SYNPO2-202ENST00000429713 MCM2P49736 904 aa9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 SARNPP82979 210 aaKnown RBP9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 SLC4A3P48751 1232 aa9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 CCDC146Q8IYE0 955 aa9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 TMX4Q9H1E5 349 aaPredicted RBP9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 DCTN1Q14203 1278 aa9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 INCENPQ9NQS7 918 aa9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 NEFHP12036 1026 aa9.13□□□□□ -0.95
SYNPO2-202ENST00000429713 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 ROCK1Q13464 1354 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 CDR1P51861 262 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 TXLNBQ8N3L3 684 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 PAIP2Q9BPZ3 127 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 GRPEL1Q9HAV7 217 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 GAPVD1Q14C86 1478 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 PRXQ9BXM0 1461 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 EIF3JO75822 258 aaKnown RBP9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 TUBBP07437 444 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 NEMFO60524 1076 aa9.12□□□□□ -0.95
SYNPO2-202ENST00000429713 A6NNZ2 444 aa9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 TUBB8Q3ZCM7 444 aa9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
SYNPO2-202ENST00000429713 TRHP20396 242 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms