RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 MSH6P52701 1360 aa20.23■□□□□ 0.83
PCCA-206ENST00000428969 ANKRD50Q9ULJ7 1429 aa20.21■□□□□ 0.83
PCCA-206ENST00000428969 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
PCCA-206ENST00000428969 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
PCCA-206ENST00000428969 ZFYVE9O95405 1425 aa20.2■□□□□ 0.82
PCCA-206ENST00000428969 BCANQ96GW7 911 aa20.19■□□□□ 0.82
PCCA-206ENST00000428969 CHD2O14647 1828 aaKnown RBP20.18■□□□□ 0.82
PCCA-206ENST00000428969 NCOA3Q9Y6Q9 1424 aa20.18■□□□□ 0.82
PCCA-206ENST00000428969 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
PCCA-206ENST00000428969 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
PCCA-206ENST00000428969 POTEAQ6S8J7 498 aa20.16■□□□□ 0.82
PCCA-206ENST00000428969 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
PCCA-206ENST00000428969 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
PCCA-206ENST00000428969 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
PCCA-206ENST00000428969 JCADQ9P266 1359 aa20.15■□□□□ 0.82
PCCA-206ENST00000428969 GCC2Q8IWJ2 1684 aa20.15■□□□□ 0.82
PCCA-206ENST00000428969 PHLPP1O60346 1717 aa20.15■□□□□ 0.82
PCCA-206ENST00000428969 MYO5BQ9ULV0 1848 aa20.14■□□□□ 0.81
PCCA-206ENST00000428969 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.14■□□□□ 0.81
PCCA-206ENST00000428969 FAM50AQ14320 339 aaKnown RBP20.13■□□□□ 0.81
PCCA-206ENST00000428969 TBX22Q9Y458 520 aa20.13■□□□□ 0.81
PCCA-206ENST00000428969 UNC13BO14795 1591 aa20.12■□□□□ 0.81
PCCA-206ENST00000428969 DIP2AQ14689 1571 aa20.11■□□□□ 0.81
PCCA-206ENST00000428969 PIK3R4Q99570 1358 aa20.1■□□□□ 0.81
PCCA-206ENST00000428969 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
PCCA-206ENST00000428969 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
PCCA-206ENST00000428969 SPATA31A6Q5VVP1 1343 aa20.06■□□□□ 0.8
PCCA-206ENST00000428969 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
PCCA-206ENST00000428969 E9PCH4 1651 aa20.06■□□□□ 0.8
PCCA-206ENST00000428969 ROCK1Q13464 1354 aa20.06■□□□□ 0.8
PCCA-206ENST00000428969 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
PCCA-206ENST00000428969 CHGAP10645 457 aaKnown RBP20.04■□□□□ 0.8
PCCA-206ENST00000428969 C14orf37Q86TY3 774 aa20.04■□□□□ 0.8
PCCA-206ENST00000428969 AHDC1Q5TGY3 1603 aaPredicted RBP20.04■□□□□ 0.8
PCCA-206ENST00000428969 IQGAP3Q86VI3 1631 aa20.04■□□□□ 0.8
PCCA-206ENST00000428969 TRPM2O94759 1503 aa20.02■□□□□ 0.8
PCCA-206ENST00000428969 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.8
PCCA-206ENST00000428969 ATF3P18847 181 aa20.02■□□□□ 0.8
PCCA-206ENST00000428969 SHPRHQ149N8 1683 aa20■□□□□ 0.79
PCCA-206ENST00000428969 ZNF772Q68DY9 489 aaPredicted RBP20■□□□□ 0.79
PCCA-206ENST00000428969 LRP6O75581 1613 aa19.99■□□□□ 0.79
PCCA-206ENST00000428969 DCCP43146 1447 aa19.99■□□□□ 0.79
PCCA-206ENST00000428969 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
PCCA-206ENST00000428969 MEX3CQ5U5Q3 659 aaKnown RBP19.97■□□□□ 0.79
PCCA-206ENST00000428969 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
PCCA-206ENST00000428969 AMOTL2Q9Y2J4 779 aa19.97■□□□□ 0.79
PCCA-206ENST00000428969 NUP155O75694 1391 aa19.96■□□□□ 0.79
PCCA-206ENST00000428969 PTPRUQ92729 1446 aa19.94■□□□□ 0.78
PCCA-206ENST00000428969 SETBP1Q9Y6X0 1596 aa19.94■□□□□ 0.78
PCCA-206ENST00000428969 BRINP3Q76B58 766 aa19.93■□□□□ 0.78
PCCA-206ENST00000428969 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
PCCA-206ENST00000428969 NRXN3Q9Y4C0 1643 aa19.91■□□□□ 0.78
PCCA-206ENST00000428969 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
PCCA-206ENST00000428969 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
PCCA-206ENST00000428969 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
PCCA-206ENST00000428969 CDK12Q9NYV4 1490 aaPredicted RBP19.89■□□□□ 0.77
PCCA-206ENST00000428969 MST1RQ04912 1400 aa19.87■□□□□ 0.77
PCCA-206ENST00000428969 RXRBP28702 533 aa19.87■□□□□ 0.77
PCCA-206ENST00000428969 UPF1Q92900 1129 aaKnown RBP eCLIP19.87■□□□□ 0.77
PCCA-206ENST00000428969 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
PCCA-206ENST00000428969 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
PCCA-206ENST00000428969 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
PCCA-206ENST00000428969 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
PCCA-206ENST00000428969 ADGRL3Q9HAR2 1447 aa19.84■□□□□ 0.77
PCCA-206ENST00000428969 METP08581 1390 aa19.83■□□□□ 0.77
PCCA-206ENST00000428969 NUTM2BA6NNL0 878 aaPredicted RBP19.83■□□□□ 0.77
PCCA-206ENST00000428969 NUTM2EB1AL46 878 aaPredicted RBP19.83■□□□□ 0.77
PCCA-206ENST00000428969 NUTM2AQ8IVF1 878 aaPredicted RBP19.83■□□□□ 0.77
PCCA-206ENST00000428969 ITGAEP38570 1179 aa19.81■□□□□ 0.76
PCCA-206ENST00000428969 AFF2P51816 1311 aa19.8■□□□□ 0.76
PCCA-206ENST00000428969 NEXMIFQ5QGS0 1516 aa19.8■□□□□ 0.76
PCCA-206ENST00000428969 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
PCCA-206ENST00000428969 NALCNQ8IZF0 1738 aa19.78■□□□□ 0.76
PCCA-206ENST00000428969 PNPLA6Q8IY17 1366 aa19.77■□□□□ 0.76
PCCA-206ENST00000428969 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
PCCA-206ENST00000428969 KIF1BO60333 1816 aa19.76■□□□□ 0.75
PCCA-206ENST00000428969 LAMC1P11047 1609 aa19.76■□□□□ 0.75
PCCA-206ENST00000428969 RBM6P78332 1123 aaKnown RBP19.74■□□□□ 0.75
PCCA-206ENST00000428969 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
PCCA-206ENST00000428969 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
PCCA-206ENST00000428969 C8orf37Q96NL8 207 aa19.73■□□□□ 0.75
PCCA-206ENST00000428969 RGS12O14924 1447 aa19.72■□□□□ 0.75
PCCA-206ENST00000428969 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
PCCA-206ENST00000428969 DDX17Q92841 729 aaKnown RBP19.71■□□□□ 0.75
PCCA-206ENST00000428969 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
PCCA-206ENST00000428969 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
PCCA-206ENST00000428969 SOS2Q07890 1332 aaPredicted RBP19.69■□□□□ 0.74
PCCA-206ENST00000428969 RPGRIP1LQ68CZ1 1315 aa19.69■□□□□ 0.74
PCCA-206ENST00000428969 NAIPQ13075 1403 aa19.68■□□□□ 0.74
PCCA-206ENST00000428969 ROBO2Q9HCK4 1378 aa19.68■□□□□ 0.74
PCCA-206ENST00000428969 HFM1A2PYH4 1435 aa19.68■□□□□ 0.74
PCCA-206ENST00000428969 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
PCCA-206ENST00000428969 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
PCCA-206ENST00000428969 COL22A1Q8NFW1 1626 aaPredicted RBP19.63■□□□□ 0.73
PCCA-206ENST00000428969 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
PCCA-206ENST00000428969 ORAI2Q96SN7 254 aa19.63■□□□□ 0.73
PCCA-206ENST00000428969 FNBP4Q8N3X1 1017 aaPredicted RBP19.62■□□□□ 0.73
PCCA-206ENST00000428969 USP21Q9UK80 565 aa19.62■□□□□ 0.73
PCCA-206ENST00000428969 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
PCCA-206ENST00000428969 PPLO60437 1756 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms