RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 GCC2Q8IWJ2 1684 aa16.74■□□□□ 0.27
APOBEC3C-202ENST00000428892 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
APOBEC3C-202ENST00000428892 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
APOBEC3C-202ENST00000428892 SLC26A8Q96RN1 970 aa16.73■□□□□ 0.27
APOBEC3C-202ENST00000428892 KCNA6P17658 529 aa16.72■□□□□ 0.27
APOBEC3C-202ENST00000428892 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
APOBEC3C-202ENST00000428892 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
APOBEC3C-202ENST00000428892 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
APOBEC3C-202ENST00000428892 MSH6P52701 1360 aa16.72■□□□□ 0.27
APOBEC3C-202ENST00000428892 TET3O43151 1660 aa16.72■□□□□ 0.27
APOBEC3C-202ENST00000428892 CHD2O14647 1828 aaKnown RBP16.71■□□□□ 0.27
APOBEC3C-202ENST00000428892 IDI1Q13907 227 aa16.71■□□□□ 0.27
APOBEC3C-202ENST00000428892 RBM33Q96EV2 1170 aaKnown RBP16.7■□□□□ 0.26
APOBEC3C-202ENST00000428892 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3C-202ENST00000428892 NOS1P29475 1434 aa16.67■□□□□ 0.26
APOBEC3C-202ENST00000428892 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
APOBEC3C-202ENST00000428892 POTEAQ6S8J7 498 aa16.65■□□□□ 0.26
APOBEC3C-202ENST00000428892 ADGRL2O95490 1459 aa16.65■□□□□ 0.26
APOBEC3C-202ENST00000428892 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
APOBEC3C-202ENST00000428892 HDGFP51858 240 aaKnown RBP16.64■□□□□ 0.25
APOBEC3C-202ENST00000428892 C14orf37Q86TY3 774 aa16.64■□□□□ 0.25
APOBEC3C-202ENST00000428892 JCADQ9P266 1359 aa16.64■□□□□ 0.25
APOBEC3C-202ENST00000428892 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
APOBEC3C-202ENST00000428892 SLAIN2Q9P270 581 aa16.62■□□□□ 0.25
APOBEC3C-202ENST00000428892 TMEM131LA2VDJ0 1609 aa16.62■□□□□ 0.25
APOBEC3C-202ENST00000428892 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
APOBEC3C-202ENST00000428892 PLEKHG1Q9ULL1 1385 aa16.62■□□□□ 0.25
APOBEC3C-202ENST00000428892 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
APOBEC3C-202ENST00000428892 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
APOBEC3C-202ENST00000428892 MEX3CQ5U5Q3 659 aaKnown RBP16.61■□□□□ 0.25
APOBEC3C-202ENST00000428892 MSH5O43196 834 aa16.6■□□□□ 0.25
APOBEC3C-202ENST00000428892 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
APOBEC3C-202ENST00000428892 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
APOBEC3C-202ENST00000428892 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
APOBEC3C-202ENST00000428892 DIP2AQ14689 1571 aa16.6■□□□□ 0.25
APOBEC3C-202ENST00000428892 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
APOBEC3C-202ENST00000428892 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
APOBEC3C-202ENST00000428892 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
APOBEC3C-202ENST00000428892 UNC13BO14795 1591 aa16.58■□□□□ 0.24
APOBEC3C-202ENST00000428892 E9PCH4 1651 aa16.58■□□□□ 0.24
APOBEC3C-202ENST00000428892 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.56■□□□□ 0.24
APOBEC3C-202ENST00000428892 ATF3P18847 181 aa16.55■□□□□ 0.24
APOBEC3C-202ENST00000428892 TRPM2O94759 1503 aa16.55■□□□□ 0.24
APOBEC3C-202ENST00000428892 NCOA3Q9Y6Q9 1424 aa16.54■□□□□ 0.24
APOBEC3C-202ENST00000428892 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
APOBEC3C-202ENST00000428892 AHDC1Q5TGY3 1603 aaPredicted RBP16.54■□□□□ 0.24
APOBEC3C-202ENST00000428892 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
APOBEC3C-202ENST00000428892 CADPS2Q86UW7 1296 aa16.53■□□□□ 0.24
APOBEC3C-202ENST00000428892 LRP6O75581 1613 aa16.52■□□□□ 0.24
APOBEC3C-202ENST00000428892 ROCK1Q13464 1354 aa16.52■□□□□ 0.24
APOBEC3C-202ENST00000428892 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.24
APOBEC3C-202ENST00000428892 NUTM2DQ5VT03 806 aaPredicted RBP16.52■□□□□ 0.24
APOBEC3C-202ENST00000428892 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
APOBEC3C-202ENST00000428892 TRIM52Q96A61 297 aa16.51■□□□□ 0.23
APOBEC3C-202ENST00000428892 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
APOBEC3C-202ENST00000428892 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
APOBEC3C-202ENST00000428892 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
APOBEC3C-202ENST00000428892 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
APOBEC3C-202ENST00000428892 ZBTB22O15209 634 aa16.47■□□□□ 0.23
APOBEC3C-202ENST00000428892 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3C-202ENST00000428892 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3C-202ENST00000428892 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3C-202ENST00000428892 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
APOBEC3C-202ENST00000428892 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
APOBEC3C-202ENST00000428892 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
APOBEC3C-202ENST00000428892 RXRBP28702 533 aa16.44■□□□□ 0.22
APOBEC3C-202ENST00000428892 AMOTL2Q9Y2J4 779 aa16.44■□□□□ 0.22
APOBEC3C-202ENST00000428892 DCCP43146 1447 aa16.44■□□□□ 0.22
APOBEC3C-202ENST00000428892 NUP155O75694 1391 aa16.42■□□□□ 0.22
APOBEC3C-202ENST00000428892 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
APOBEC3C-202ENST00000428892 BRINP3Q76B58 766 aa16.42■□□□□ 0.22
APOBEC3C-202ENST00000428892 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.222e-29■■■■■ 42.3
APOBEC3C-202ENST00000428892 KIF1BO60333 1816 aa16.42■□□□□ 0.22
APOBEC3C-202ENST00000428892 ITGAEP38570 1179 aa16.41■□□□□ 0.22
APOBEC3C-202ENST00000428892 ZNF326Q5BKZ1 582 aaKnown RBP16.41■□□□□ 0.22
APOBEC3C-202ENST00000428892 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
APOBEC3C-202ENST00000428892 NALCNQ8IZF0 1738 aa16.4■□□□□ 0.22
APOBEC3C-202ENST00000428892 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
APOBEC3C-202ENST00000428892 CDK12Q9NYV4 1490 aaPredicted RBP16.39■□□□□ 0.21
APOBEC3C-202ENST00000428892 AFF2P51816 1311 aa16.39■□□□□ 0.21
APOBEC3C-202ENST00000428892 NAIPQ13075 1403 aa16.38■□□□□ 0.21
APOBEC3C-202ENST00000428892 MST1RQ04912 1400 aa16.37■□□□□ 0.21
APOBEC3C-202ENST00000428892 SETD5Q9C0A6 1442 aa16.36■□□□□ 0.21
APOBEC3C-202ENST00000428892 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
APOBEC3C-202ENST00000428892 C8orf37Q96NL8 207 aa16.36■□□□□ 0.21
APOBEC3C-202ENST00000428892 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
APOBEC3C-202ENST00000428892 ADGRL3Q9HAR2 1447 aa16.34■□□□□ 0.21
APOBEC3C-202ENST00000428892 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
APOBEC3C-202ENST00000428892 NEXMIFQ5QGS0 1516 aa16.32■□□□□ 0.2
APOBEC3C-202ENST00000428892 RGS12O14924 1447 aa16.31■□□□□ 0.2
APOBEC3C-202ENST00000428892 METP08581 1390 aa16.31■□□□□ 0.2
APOBEC3C-202ENST00000428892 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
APOBEC3C-202ENST00000428892 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
APOBEC3C-202ENST00000428892 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
APOBEC3C-202ENST00000428892 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
APOBEC3C-202ENST00000428892 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
APOBEC3C-202ENST00000428892 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
APOBEC3C-202ENST00000428892 NGLY1Q96IV0 654 aa16.28■□□□□ 0.2
APOBEC3C-202ENST00000428892 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
APOBEC3C-202ENST00000428892 LAMC1P11047 1609 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 237.8 ms