RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.38
SMC6-204ENST00000428868 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
SMC6-204ENST00000428868 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
SMC6-204ENST00000428868 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
SMC6-204ENST00000428868 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
SMC6-204ENST00000428868 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
SMC6-204ENST00000428868 NRXN1Q9ULB1 1477 aa12.69□□□□□ -0.38
SMC6-204ENST00000428868 ZNF142P52746 1687 aaPredicted RBP12.69□□□□□ -0.38
SMC6-204ENST00000428868 TNRQ92752 1358 aa12.69□□□□□ -0.38
SMC6-204ENST00000428868 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
SMC6-204ENST00000428868 NRXN3Q9Y4C0 1643 aa12.67□□□□□ -0.38
SMC6-204ENST00000428868 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
SMC6-204ENST00000428868 SLC52A1Q9NWF4 448 aa12.66□□□□□ -0.38
SMC6-204ENST00000428868 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.38
SMC6-204ENST00000428868 NUTM2DQ5VT03 806 aaPredicted RBP12.65□□□□□ -0.38
SMC6-204ENST00000428868 ASXL1Q8IXJ9 1541 aa12.65□□□□□ -0.38
SMC6-204ENST00000428868 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
SMC6-204ENST00000428868 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
SMC6-204ENST00000428868 NBPF1Q3BBV0 1214 aa12.64□□□□□ -0.39
SMC6-204ENST00000428868 ARHGEF28Q8N1W1 1705 aaKnown RBP12.64□□□□□ -0.39
SMC6-204ENST00000428868 HSPA5P11021 654 aaKnown RBP12.63□□□□□ -0.39
SMC6-204ENST00000428868 NLRP1Q9C000 1473 aa12.63□□□□□ -0.39
SMC6-204ENST00000428868 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 ADGRB1O14514 1584 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 SETBP1Q9Y6X0 1596 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 PTPRMP28827 1452 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 ROCK2O75116 1388 aaKnown RBP12.62□□□□□ -0.39
SMC6-204ENST00000428868 GPRASP1Q5JY77 1395 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 RIMS2Q9UQ26 1411 aa12.62□□□□□ -0.39
SMC6-204ENST00000428868 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
SMC6-204ENST00000428868 QRICH2Q9H0J4 1663 aa12.61□□□□□ -0.39
SMC6-204ENST00000428868 ALKQ9UM73 1620 aa12.59□□□□□ -0.39
SMC6-204ENST00000428868 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
SMC6-204ENST00000428868 RPGRIP1LQ68CZ1 1315 aa12.59□□□□□ -0.39
SMC6-204ENST00000428868 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMC6-204ENST00000428868 CARD11Q9BXL7 1154 aa12.58□□□□□ -0.4
SMC6-204ENST00000428868 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
SMC6-204ENST00000428868 SLIT1O75093 1534 aa12.57□□□□□ -0.4
SMC6-204ENST00000428868 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
SMC6-204ENST00000428868 C11orf95C9JLR9 678 aaPredicted RBP12.56□□□□□ -0.4
SMC6-204ENST00000428868 LMTK3Q96Q04 1460 aa12.56□□□□□ -0.4
SMC6-204ENST00000428868 KNDC1Q76NI1 1749 aa12.56□□□□□ -0.4
SMC6-204ENST00000428868 STAC3Q96MF2 364 aa12.55□□□□□ -0.4
SMC6-204ENST00000428868 TMEM2Q9UHN6 1383 aa12.55□□□□□ -0.4
SMC6-204ENST00000428868 SCAF11Q99590 1463 aaKnown RBP12.54□□□□□ -0.4
SMC6-204ENST00000428868 MYOM1P52179 1685 aa12.54□□□□□ -0.4
SMC6-204ENST00000428868 C14orf93Q9H972 538 aaKnown RBP12.53□□□□□ -0.4
SMC6-204ENST00000428868 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
SMC6-204ENST00000428868 VGFO15240 615 aaPredicted RBP12.52□□□□□ -0.41
SMC6-204ENST00000428868 TMEM132EQ6IEE7 984 aa12.52□□□□□ -0.41
SMC6-204ENST00000428868 WASHC2AQ641Q2 1341 aa12.52□□□□□ -0.41
SMC6-204ENST00000428868 LTKP29376 864 aa12.51□□□□□ -0.41
SMC6-204ENST00000428868 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
SMC6-204ENST00000428868 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
SMC6-204ENST00000428868 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
SMC6-204ENST00000428868 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
SMC6-204ENST00000428868 CHD2O14647 1828 aaKnown RBP12.48□□□□□ -0.41
SMC6-204ENST00000428868 MED14O60244 1454 aa12.48□□□□□ -0.41
SMC6-204ENST00000428868 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
SMC6-204ENST00000428868 YTHDC2Q9H6S0 1430 aaKnown RBP12.47□□□□□ -0.41
SMC6-204ENST00000428868 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
SMC6-204ENST00000428868 TESK2Q96S53 571 aa12.47□□□□□ -0.41
SMC6-204ENST00000428868 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
SMC6-204ENST00000428868 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
SMC6-204ENST00000428868 STRCQ7RTU9 1775 aa12.46□□□□□ -0.41
SMC6-204ENST00000428868 METP08581 1390 aa12.46□□□□□ -0.41
SMC6-204ENST00000428868 SOCS7O14512 581 aa12.46□□□□□ -0.41
SMC6-204ENST00000428868 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
SMC6-204ENST00000428868 ILDR2Q71H61 639 aa12.46□□□□□ -0.41
SMC6-204ENST00000428868 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.41
SMC6-204ENST00000428868 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
SMC6-204ENST00000428868 CPS1P31327 1500 aa12.46□□□□□ -0.42
SMC6-204ENST00000428868 TULP4Q9NRJ4 1543 aa12.46□□□□□ -0.42
SMC6-204ENST00000428868 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
SMC6-204ENST00000428868 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
SMC6-204ENST00000428868 DLC1Q96QB1 1528 aa12.45□□□□□ -0.42
SMC6-204ENST00000428868 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
SMC6-204ENST00000428868 HSPA2P54652 639 aa12.44□□□□□ -0.42
SMC6-204ENST00000428868 THEMISQ8N1K5 641 aaPredicted RBP12.44□□□□□ -0.42
SMC6-204ENST00000428868 PTPRUQ92729 1446 aa12.44□□□□□ -0.42
SMC6-204ENST00000428868 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
SMC6-204ENST00000428868 STRCP1A6NGW2 1772 aa12.43□□□□□ -0.42
SMC6-204ENST00000428868 STK26Q9P289 416 aa12.43□□□□□ -0.42
SMC6-204ENST00000428868 POLR3GLQ9BT43 218 aa12.42□□□□□ -0.42
SMC6-204ENST00000428868 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
SMC6-204ENST00000428868 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
SMC6-204ENST00000428868 PLEKHH1Q9ULM0 1364 aa12.42□□□□□ -0.42
SMC6-204ENST00000428868 CENPJQ9HC77 1338 aaPredicted RBP12.41□□□□□ -0.42
SMC6-204ENST00000428868 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
SMC6-204ENST00000428868 NALCNQ8IZF0 1738 aa12.4□□□□□ -0.42
SMC6-204ENST00000428868 BCANQ96GW7 911 aa12.4□□□□□ -0.42
SMC6-204ENST00000428868 EID1Q9Y6B2 187 aa12.4□□□□□ -0.42
SMC6-204ENST00000428868 TECPR2O15040 1411 aa12.39□□□□□ -0.43
SMC6-204ENST00000428868 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
SMC6-204ENST00000428868 SAFB2Q14151 953 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMC6-204ENST00000428868 SBNO2Q9Y2G9 1366 aa12.39□□□□□ -0.43
SMC6-204ENST00000428868 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
SMC6-204ENST00000428868 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
SMC6-204ENST00000428868 MIER1Q8N108 512 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms