RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 DISP3Q9P2K9 1392 aa9.95□□□□□ -0.82
CNOT4-206ENST00000428680 CANXP27824 592 aaKnown RBP9.94□□□□□ -0.82
CNOT4-206ENST00000428680 EFCAB6Q5THR3 1501 aa9.94□□□□□ -0.82
CNOT4-206ENST00000428680 HSPA2P54652 639 aa9.93□□□□□ -0.82
CNOT4-206ENST00000428680 PHF23Q9BUL5 403 aaPredicted RBP9.93□□□□□ -0.82
CNOT4-206ENST00000428680 ADGRB3O60242 1522 aa9.93□□□□□ -0.82
CNOT4-206ENST00000428680 FGD6Q6ZV73 1430 aa9.93□□□□□ -0.82
CNOT4-206ENST00000428680 DAPK1P53355 1430 aa9.92□□□□□ -0.82
CNOT4-206ENST00000428680 GCC2Q8IWJ2 1684 aa9.92□□□□□ -0.82
CNOT4-206ENST00000428680 KDM2AQ9Y2K7 1162 aa9.92□□□□□ -0.82
CNOT4-206ENST00000428680 TET3O43151 1660 aa9.92□□□□□ -0.82
CNOT4-206ENST00000428680 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
CNOT4-206ENST00000428680 DCCP43146 1447 aa9.91□□□□□ -0.82
CNOT4-206ENST00000428680 MSH6P52701 1360 aa9.9□□□□□ -0.82
CNOT4-206ENST00000428680 SIGLEC1Q9BZZ2 1709 aa9.9□□□□□ -0.82
CNOT4-206ENST00000428680 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.82
CNOT4-206ENST00000428680 NWD1Q149M9 1564 aa9.9□□□□□ -0.83
CNOT4-206ENST00000428680 VWDEQ8N2E2 1590 aa9.89□□□□□ -0.83
CNOT4-206ENST00000428680 TRPM2O94759 1503 aa9.89□□□□□ -0.83
CNOT4-206ENST00000428680 POGKQ9P215 609 aa9.89□□□□□ -0.83
CNOT4-206ENST00000428680 PLEKHG1Q9ULL1 1385 aa9.88□□□□□ -0.83
CNOT4-206ENST00000428680 KCNA6P17658 529 aa9.88□□□□□ -0.83
CNOT4-206ENST00000428680 TMEM2Q9UHN6 1383 aa9.88□□□□□ -0.83
CNOT4-206ENST00000428680 CEBPAP49715 358 aaPredicted RBP9.87□□□□□ -0.83
CNOT4-206ENST00000428680 STAC3Q96MF2 364 aa9.87□□□□□ -0.83
CNOT4-206ENST00000428680 RPGRIP1LQ68CZ1 1315 aa9.87□□□□□ -0.83
CNOT4-206ENST00000428680 UNC13BO14795 1591 aa9.87□□□□□ -0.83
CNOT4-206ENST00000428680 UBR1Q8IWV7 1749 aa9.87□□□□□ -0.83
CNOT4-206ENST00000428680 DCAF8L1A6NGE4 600 aa9.87□□□□□ -0.83
CNOT4-206ENST00000428680 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
CNOT4-206ENST00000428680 NEURL4Q96JN8 1562 aa9.86□□□□□ -0.83
CNOT4-206ENST00000428680 RGL3Q3MIN7 710 aa9.86□□□□□ -0.83
CNOT4-206ENST00000428680 NOS1P29475 1434 aa9.85□□□□□ -0.83
CNOT4-206ENST00000428680 TMC1Q8TDI8 760 aa9.85□□□□□ -0.83
CNOT4-206ENST00000428680 CEP152O94986 1710 aa9.85□□□□□ -0.83
CNOT4-206ENST00000428680 SPATA31A6Q5VVP1 1343 aa9.85□□□□□ -0.83
CNOT4-206ENST00000428680 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
CNOT4-206ENST00000428680 ABCC5O15440 1437 aa9.84□□□□□ -0.83
CNOT4-206ENST00000428680 ANKRD50Q9ULJ7 1429 aa9.84□□□□□ -0.83
CNOT4-206ENST00000428680 TBX22Q9Y458 520 aa9.84□□□□□ -0.83
CNOT4-206ENST00000428680 EIF3AQ14152 1382 aaKnown RBP9.84□□□□□ -0.83
CNOT4-206ENST00000428680 CADPS2Q86UW7 1296 aa9.83□□□□□ -0.84
CNOT4-206ENST00000428680 IQGAP3Q86VI3 1631 aa9.82□□□□□ -0.84
CNOT4-206ENST00000428680 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
CNOT4-206ENST00000428680 LRPPRCP42704 1394 aaKnown RBP9.81□□□□□ -0.84
CNOT4-206ENST00000428680 LRRC7Q96NW7 1537 aa9.81□□□□□ -0.84
CNOT4-206ENST00000428680 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
CNOT4-206ENST00000428680 JCADQ9P266 1359 aa9.81□□□□□ -0.84
CNOT4-206ENST00000428680 MED1Q15648 1581 aaPredicted RBP9.81□□□□□ -0.84
CNOT4-206ENST00000428680 MROH1Q8NDA8 1641 aa9.81□□□□□ -0.84
CNOT4-206ENST00000428680 ANP32CO43423 234 aa9.8□□□□□ -0.84
CNOT4-206ENST00000428680 CDK12Q9NYV4 1490 aaPredicted RBP9.8□□□□□ -0.84
CNOT4-206ENST00000428680 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
CNOT4-206ENST00000428680 MEX3CQ5U5Q3 659 aaKnown RBP9.79□□□□□ -0.84
CNOT4-206ENST00000428680 PPM1GO15355 546 aaPredicted RBP9.78□□□□□ -0.84
CNOT4-206ENST00000428680 ATF3P18847 181 aa9.78□□□□□ -0.84
CNOT4-206ENST00000428680 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
CNOT4-206ENST00000428680 RIMS2Q9UQ26 1411 aa9.78□□□□□ -0.84
CNOT4-206ENST00000428680 ZNF335Q9H4Z2 1342 aaPredicted RBP9.78□□□□□ -0.84
CNOT4-206ENST00000428680 PIK3C2BO00750 1634 aa9.78□□□□□ -0.84
CNOT4-206ENST00000428680 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
CNOT4-206ENST00000428680 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
CNOT4-206ENST00000428680 ZFYVE9O95405 1425 aa9.76□□□□□ -0.85
CNOT4-206ENST00000428680 VGFO15240 615 aaPredicted RBP9.76□□□□□ -0.85
CNOT4-206ENST00000428680 HMGB2P26583 209 aaKnown RBP9.76□□□□□ -0.85
CNOT4-206ENST00000428680 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
CNOT4-206ENST00000428680 AHDC1Q5TGY3 1603 aaPredicted RBP9.75□□□□□ -0.85
CNOT4-206ENST00000428680 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
CNOT4-206ENST00000428680 SETBP1Q9Y6X0 1596 aa9.74□□□□□ -0.85
CNOT4-206ENST00000428680 PAK3O75914 559 aaPredicted RBP9.73□□□□□ -0.85
CNOT4-206ENST00000428680 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
CNOT4-206ENST00000428680 SOX12O15370 315 aa9.73□□□□□ -0.85
CNOT4-206ENST00000428680 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
CNOT4-206ENST00000428680 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
CNOT4-206ENST00000428680 ANKRD30BQ9BXX2 1392 aa9.72□□□□□ -0.85
CNOT4-206ENST00000428680 PTCH1Q13635 1447 aa9.72□□□□□ -0.85
CNOT4-206ENST00000428680 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.85
CNOT4-206ENST00000428680 SIRT1Q96EB6 747 aa9.71□□□□□ -0.86
CNOT4-206ENST00000428680 NGLY1Q96IV0 654 aa9.71□□□□□ -0.86
CNOT4-206ENST00000428680 SHPRHQ149N8 1683 aa9.71□□□□□ -0.86
CNOT4-206ENST00000428680 CCDC125Q86Z20 511 aa9.71□□□□□ -0.86
CNOT4-206ENST00000428680 ALKQ9UM73 1620 aa9.71□□□□□ -0.86
CNOT4-206ENST00000428680 LAMC1P11047 1609 aa9.7□□□□□ -0.86
CNOT4-206ENST00000428680 TMX4Q9H1E5 349 aaPredicted RBP9.7□□□□□ -0.86
CNOT4-206ENST00000428680 TMEM94Q12767 1356 aa9.69□□□□□ -0.86
CNOT4-206ENST00000428680 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
CNOT4-206ENST00000428680 TMEM131LA2VDJ0 1609 aa9.69□□□□□ -0.86
CNOT4-206ENST00000428680 WDR43Q15061 677 aaKnown RBP eCLIP9.69□□□□□ -0.86
CNOT4-206ENST00000428680 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
CNOT4-206ENST00000428680 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
CNOT4-206ENST00000428680 LRRC59Q96AG4 307 aaKnown RBP9.69□□□□□ -0.86
CNOT4-206ENST00000428680 SPHKAPQ2M3C7 1700 aa9.69□□□□□ -0.86
CNOT4-206ENST00000428680 KIF1BO60333 1816 aa9.68□□□□□ -0.86
CNOT4-206ENST00000428680 NUP155O75694 1391 aa9.68□□□□□ -0.86
CNOT4-206ENST00000428680 CHD2O14647 1828 aaKnown RBP9.68□□□□□ -0.86
CNOT4-206ENST00000428680 HSPA1LP34931 641 aa9.68□□□□□ -0.86
CNOT4-206ENST00000428680 SETD1AO15047 1707 aaKnown RBP9.68□□□□□ -0.86
CNOT4-206ENST00000428680 PHLPP1O60346 1717 aa9.67□□□□□ -0.86
CNOT4-206ENST00000428680 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
CNOT4-206ENST00000428680 STK26Q9P289 416 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms