RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
STRC-201ENST00000428650 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.62■□□□□ 0.41
STRC-201ENST00000428650 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
STRC-201ENST00000428650 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
STRC-201ENST00000428650 ISY1Q9ULR0 285 aaKnown RBP17.62■□□□□ 0.41
STRC-201ENST00000428650 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
STRC-201ENST00000428650 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
STRC-201ENST00000428650 TPM1P09493 284 aa17.61■□□□□ 0.41
STRC-201ENST00000428650 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
STRC-201ENST00000428650 HSP90AA2PQ14568 343 aaPredicted RBP17.61■□□□□ 0.41
STRC-201ENST00000428650 EHBP1L1Q8N3D4 1523 aa17.6■□□□□ 0.41
STRC-201ENST00000428650 GPS2Q13227 327 aa17.6■□□□□ 0.41
STRC-201ENST00000428650 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
STRC-201ENST00000428650 TPM2P07951 284 aa17.59■□□□□ 0.41
STRC-201ENST00000428650 TSR1Q2NL82 804 aaKnown RBP17.59■□□□□ 0.41
STRC-201ENST00000428650 RASSF8Q8NHQ8 419 aa17.59■□□□□ 0.41
STRC-201ENST00000428650 DDX58O95786 925 aaKnown RBP17.59■□□□□ 0.41
STRC-201ENST00000428650 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
STRC-201ENST00000428650 BECN2A8MW95 431 aa17.58■□□□□ 0.41
STRC-201ENST00000428650 RILPL2Q969X0 211 aa17.58■□□□□ 0.41
STRC-201ENST00000428650 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.4
STRC-201ENST00000428650 SYNE3Q6ZMZ3 975 aa17.58■□□□□ 0.4
STRC-201ENST00000428650 HOOK1Q9UJC3 728 aaKnown RBP17.58■□□□□ 0.4
STRC-201ENST00000428650 CLSTN1O94985 981 aa17.57■□□□□ 0.4
STRC-201ENST00000428650 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
STRC-201ENST00000428650 TEFQ10587 303 aa17.57■□□□□ 0.4
STRC-201ENST00000428650 PLEKHH2Q8IVE3 1493 aa17.57■□□□□ 0.4
STRC-201ENST00000428650 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
STRC-201ENST00000428650 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
STRC-201ENST00000428650 PLIN1O60240 522 aa17.56■□□□□ 0.4
STRC-201ENST00000428650 FOXD4L1Q9NU39 408 aa17.56■□□□□ 0.4
STRC-201ENST00000428650 RIPK4P57078 832 aa17.56■□□□□ 0.4
STRC-201ENST00000428650 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
STRC-201ENST00000428650 ERC2O15083 957 aa17.55■□□□□ 0.4
STRC-201ENST00000428650 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
STRC-201ENST00000428650 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
STRC-201ENST00000428650 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
STRC-201ENST00000428650 NOL8Q76FK4 1167 aaKnown RBP17.53■□□□□ 0.4
STRC-201ENST00000428650 CCDC47Q96A33 483 aaKnown RBP17.53■□□□□ 0.4
STRC-201ENST00000428650 TPD52L1Q16890 204 aaPredicted RBP17.53■□□□□ 0.4
STRC-201ENST00000428650 CDC45O75419 566 aa17.53■□□□□ 0.4
STRC-201ENST00000428650 IFIT2P09913 472 aaKnown RBP17.52■□□□□ 0.4
STRC-201ENST00000428650 TRIM29Q14134 588 aa17.52■□□□□ 0.4
STRC-201ENST00000428650 ANKRD20A12PQ8NF67 263 aa17.52■□□□□ 0.4
STRC-201ENST00000428650 A0A0U1RQG5 324 aaPredicted RBP17.52■□□□□ 0.4
STRC-201ENST00000428650 LETM1O95202 739 aaPredicted RBP17.52■□□□□ 0.39
STRC-201ENST00000428650 CEP89Q96ST8 783 aa17.52■□□□□ 0.39
STRC-201ENST00000428650 MCM2P49736 904 aa17.51■□□□□ 0.39
STRC-201ENST00000428650 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
STRC-201ENST00000428650 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
STRC-201ENST00000428650 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
STRC-201ENST00000428650 C9orf78Q9NZ63 289 aaPredicted RBP17.51■□□□□ 0.39
STRC-201ENST00000428650 MTERF4Q7Z6M4 381 aaKnown RBP17.51■□□□□ 0.39
STRC-201ENST00000428650 MRE11P49959 708 aa17.51■□□□□ 0.39
STRC-201ENST00000428650 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
STRC-201ENST00000428650 BCL2L13Q9BXK5 485 aa17.5■□□□□ 0.39
STRC-201ENST00000428650 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
STRC-201ENST00000428650 TOMM22Q9NS69 142 aa17.49■□□□□ 0.39
STRC-201ENST00000428650 KIAA1107Q9UPP5 1409 aa17.48■□□□□ 0.39
STRC-201ENST00000428650 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
STRC-201ENST00000428650 SETQ01105 290 aaPredicted RBP17.48■□□□□ 0.39
STRC-201ENST00000428650 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
STRC-201ENST00000428650 ANO2Q9NQ90 1003 aa17.48■□□□□ 0.39
STRC-201ENST00000428650 MINK1Q8N4C8 1332 aaPredicted RBP17.48■□□□□ 0.39
STRC-201ENST00000428650 NUTM2DQ5VT03 806 aaPredicted RBP17.47■□□□□ 0.39
STRC-201ENST00000428650 SMC3Q9UQE7 1217 aa17.47■□□□□ 0.39
STRC-201ENST00000428650 MAP7D2Q96T17 732 aa17.47■□□□□ 0.39
STRC-201ENST00000428650 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
STRC-201ENST00000428650 MARCH6O60337 910 aa17.47■□□□□ 0.39
STRC-201ENST00000428650 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
STRC-201ENST00000428650 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
STRC-201ENST00000428650 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
STRC-201ENST00000428650 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
STRC-201ENST00000428650 IPO7O95373 1038 aaKnown RBP17.46■□□□□ 0.39
STRC-201ENST00000428650 MBD3O95983 291 aa17.46■□□□□ 0.39
STRC-201ENST00000428650 TRDNQ13061 729 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 CFTRP13569 1480 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 CCDC39Q9UFE4 941 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.45■□□□□ 0.38
STRC-201ENST00000428650 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
STRC-201ENST00000428650 PSMA5P28066 241 aa17.45■□□□□ 0.38
STRC-201ENST00000428650 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
STRC-201ENST00000428650 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
STRC-201ENST00000428650 TEX35Q5T0J7 233 aa17.44■□□□□ 0.38
STRC-201ENST00000428650 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
STRC-201ENST00000428650 CPLX1O14810 134 aa17.44■□□□□ 0.38
STRC-201ENST00000428650 GNAI3P08754 354 aa17.44■□□□□ 0.38
STRC-201ENST00000428650 HIP1O00291 1037 aa17.44■□□□□ 0.38
STRC-201ENST00000428650 NOL10Q9BSC4 688 aaKnown RBP17.44■□□□□ 0.38
STRC-201ENST00000428650 G3V3G9 751 aa17.43■□□□□ 0.38
STRC-201ENST00000428650 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
STRC-201ENST00000428650 SASS6Q6UVJ0 657 aa17.43■□□□□ 0.38
STRC-201ENST00000428650 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
STRC-201ENST00000428650 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
STRC-201ENST00000428650 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
STRC-201ENST00000428650 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
STRC-201ENST00000428650 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms