RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
CTDSP1-202ENST00000428361 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
CTDSP1-202ENST00000428361 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
CTDSP1-202ENST00000428361 RIMS2Q9UQ26 1411 aa23.46■■□□□ 1.35
CTDSP1-202ENST00000428361 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.34
CTDSP1-202ENST00000428361 CHGAP10645 457 aaKnown RBP23.45■■□□□ 1.34
CTDSP1-202ENST00000428361 SLC26A8Q96RN1 970 aa23.45■■□□□ 1.34
CTDSP1-202ENST00000428361 ALKQ9UM73 1620 aa23.44■■□□□ 1.34
CTDSP1-202ENST00000428361 NWD1Q149M9 1564 aa23.41■■□□□ 1.34
CTDSP1-202ENST00000428361 TMEM94Q12767 1356 aa23.4■■□□□ 1.34
CTDSP1-202ENST00000428361 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
CTDSP1-202ENST00000428361 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
CTDSP1-202ENST00000428361 DIP2AQ14689 1571 aa23.37■■□□□ 1.33
CTDSP1-202ENST00000428361 TBX22Q9Y458 520 aa23.37■■□□□ 1.33
CTDSP1-202ENST00000428361 XIRP1Q702N8 1843 aaKnown RBP23.37■■□□□ 1.33
CTDSP1-202ENST00000428361 ILDR2Q71H61 639 aa23.35■■□□□ 1.33
CTDSP1-202ENST00000428361 SPHKAPQ2M3C7 1700 aa23.35■■□□□ 1.33
CTDSP1-202ENST00000428361 MSH6P52701 1360 aa23.35■■□□□ 1.33
CTDSP1-202ENST00000428361 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
CTDSP1-202ENST00000428361 NAIPQ13075 1403 aa23.34■■□□□ 1.33
CTDSP1-202ENST00000428361 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
CTDSP1-202ENST00000428361 FAM135BQ49AJ0 1406 aa23.33■■□□□ 1.33
CTDSP1-202ENST00000428361 SOCS7O14512 581 aa23.32■■□□□ 1.32
CTDSP1-202ENST00000428361 NCOA3Q9Y6Q9 1424 aa23.32■■□□□ 1.32
CTDSP1-202ENST00000428361 CHD2O14647 1828 aaKnown RBP23.31■■□□□ 1.32
CTDSP1-202ENST00000428361 HFM1A2PYH4 1435 aa23.31■■□□□ 1.32
CTDSP1-202ENST00000428361 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
CTDSP1-202ENST00000428361 TRPM2O94759 1503 aa23.28■■□□□ 1.32
CTDSP1-202ENST00000428361 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
CTDSP1-202ENST00000428361 ZNF326Q5BKZ1 582 aaKnown RBP23.27■■□□□ 1.32
CTDSP1-202ENST00000428361 NUTM2DQ5VT03 806 aaPredicted RBP23.25■■□□□ 1.31
CTDSP1-202ENST00000428361 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
CTDSP1-202ENST00000428361 SENP3Q9H4L4 574 aaPredicted RBP23.25■■□□□ 1.31
CTDSP1-202ENST00000428361 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
CTDSP1-202ENST00000428361 RBM33Q96EV2 1170 aaKnown RBP23.22■■□□□ 1.31
CTDSP1-202ENST00000428361 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
CTDSP1-202ENST00000428361 ROBO1Q9Y6N7 1651 aa23.21■■□□□ 1.31
CTDSP1-202ENST00000428361 CADPS2Q86UW7 1296 aa23.2■■□□□ 1.3
CTDSP1-202ENST00000428361 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
CTDSP1-202ENST00000428361 SLAIN2Q9P270 581 aa23.2■■□□□ 1.3
CTDSP1-202ENST00000428361 KIF1BO60333 1816 aa23.19■■□□□ 1.3
CTDSP1-202ENST00000428361 CLTCL1P53675 1640 aa23.19■■□□□ 1.3
CTDSP1-202ENST00000428361 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
CTDSP1-202ENST00000428361 C19orf44Q9H6X5 657 aa23.18■■□□□ 1.3
CTDSP1-202ENST00000428361 ATF3P18847 181 aa23.17■■□□□ 1.3
CTDSP1-202ENST00000428361 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
CTDSP1-202ENST00000428361 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.3
CTDSP1-202ENST00000428361 RPGRIP1LQ68CZ1 1315 aa23.13■■□□□ 1.29
CTDSP1-202ENST00000428361 NRXN3Q9Y4C0 1643 aa23.13■■□□□ 1.29
CTDSP1-202ENST00000428361 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
CTDSP1-202ENST00000428361 DCCP43146 1447 aa23.13■■□□□ 1.29
CTDSP1-202ENST00000428361 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
CTDSP1-202ENST00000428361 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
CTDSP1-202ENST00000428361 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
CTDSP1-202ENST00000428361 PHLPP1O60346 1717 aa23.08■■□□□ 1.29
CTDSP1-202ENST00000428361 JCADQ9P266 1359 aa23.08■■□□□ 1.29
CTDSP1-202ENST00000428361 METP08581 1390 aa23.06■■□□□ 1.28
CTDSP1-202ENST00000428361 CCDC144AA2RUR9 1427 aa23.05■■□□□ 1.28
CTDSP1-202ENST00000428361 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.28
CTDSP1-202ENST00000428361 ADGRL3Q9HAR2 1447 aa23.01■■□□□ 1.27
CTDSP1-202ENST00000428361 PTCH1Q13635 1447 aa23■■□□□ 1.27
CTDSP1-202ENST00000428361 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
CTDSP1-202ENST00000428361 COL16A1Q07092 1604 aaPredicted RBP23■■□□□ 1.27
CTDSP1-202ENST00000428361 SPATA31A6Q5VVP1 1343 aa22.99■■□□□ 1.27
CTDSP1-202ENST00000428361 PPLO60437 1756 aa22.98■■□□□ 1.27
CTDSP1-202ENST00000428361 BRINP3Q76B58 766 aa22.97■■□□□ 1.27
CTDSP1-202ENST00000428361 PRAG1Q86YV5 1406 aa22.97■■□□□ 1.27
CTDSP1-202ENST00000428361 ANKRD30BQ9BXX2 1392 aa22.96■■□□□ 1.27
CTDSP1-202ENST00000428361 MST1RQ04912 1400 aa22.95■■□□□ 1.26
CTDSP1-202ENST00000428361 SETD5Q9C0A6 1442 aa22.95■■□□□ 1.26
CTDSP1-202ENST00000428361 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
CTDSP1-202ENST00000428361 FOXD1Q16676 465 aa22.94■■□□□ 1.26
CTDSP1-202ENST00000428361 SETD1AO15047 1707 aaKnown RBP22.94■■□□□ 1.26
CTDSP1-202ENST00000428361 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
CTDSP1-202ENST00000428361 SHPRHQ149N8 1683 aa22.91■■□□□ 1.26
CTDSP1-202ENST00000428361 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
CTDSP1-202ENST00000428361 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
CTDSP1-202ENST00000428361 MEX3CQ5U5Q3 659 aaKnown RBP22.9■■□□□ 1.26
CTDSP1-202ENST00000428361 RGL3Q3MIN7 710 aa22.89■■□□□ 1.25
CTDSP1-202ENST00000428361 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.25
CTDSP1-202ENST00000428361 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
CTDSP1-202ENST00000428361 NHSL1Q5SYE7 1610 aa22.87■■□□□ 1.25
CTDSP1-202ENST00000428361 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
CTDSP1-202ENST00000428361 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
CTDSP1-202ENST00000428361 ADGRF5Q8IZF2 1346 aa22.84■■□□□ 1.25
CTDSP1-202ENST00000428361 IFT172Q9UG01 1749 aa22.84■■□□□ 1.25
CTDSP1-202ENST00000428361 POTEAQ6S8J7 498 aa22.83■■□□□ 1.25
CTDSP1-202ENST00000428361 RAB3GAP2Q9H2M9 1393 aa22.83■■□□□ 1.25
CTDSP1-202ENST00000428361 TECPR2O15040 1411 aa22.82■■□□□ 1.24
CTDSP1-202ENST00000428361 PIK3C2GO75747 1445 aa22.82■■□□□ 1.24
CTDSP1-202ENST00000428361 LRPPRCP42704 1394 aaKnown RBP22.81■■□□□ 1.24
CTDSP1-202ENST00000428361 LRP6O75581 1613 aa22.81■■□□□ 1.24
CTDSP1-202ENST00000428361 CDC42BPGQ6DT37 1551 aa22.8■■□□□ 1.24
CTDSP1-202ENST00000428361 ABCC11Q96J66 1382 aa22.79■■□□□ 1.24
CTDSP1-202ENST00000428361 LAMC1P11047 1609 aa22.77■■□□□ 1.24
CTDSP1-202ENST00000428361 MYOM2P54296 1465 aa22.77■■□□□ 1.24
CTDSP1-202ENST00000428361 KNDC1Q76NI1 1749 aa22.77■■□□□ 1.23
CTDSP1-202ENST00000428361 NUTM2BA6NNL0 878 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-202ENST00000428361 NUTM2EB1AL46 878 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-202ENST00000428361 HRCP23327 699 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms