RNA–Protein interactions for RNA: ENST00000428308.6

PAPD4-203, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-203ENST00000428308 INO80Q9ULG1 1556 aaPredicted RBP9.38□□□□□ -0.91
PAPD4-203ENST00000428308 ZNF335Q9H4Z2 1342 aaPredicted RBP9.38□□□□□ -0.91
PAPD4-203ENST00000428308 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
PAPD4-203ENST00000428308 CCDC141Q6ZP82 1450 aa9.37□□□□□ -0.91
PAPD4-203ENST00000428308 ADGBQ8N7X0 1667 aa9.37□□□□□ -0.91
PAPD4-203ENST00000428308 STRCQ7RTU9 1775 aa9.37□□□□□ -0.91
PAPD4-203ENST00000428308 ABCC5O15440 1437 aa9.37□□□□□ -0.91
PAPD4-203ENST00000428308 KIAA1107Q9UPP5 1409 aa9.36□□□□□ -0.91
PAPD4-203ENST00000428308 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
PAPD4-203ENST00000428308 DAPK1P53355 1430 aa9.35□□□□□ -0.91
PAPD4-203ENST00000428308 KIF3BO15066 747 aa9.35□□□□□ -0.91
PAPD4-203ENST00000428308 TSPY4P0CV99 314 aa9.35□□□□□ -0.91
PAPD4-203ENST00000428308 TSPY10P0CW01 314 aa9.35□□□□□ -0.91
PAPD4-203ENST00000428308 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
PAPD4-203ENST00000428308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.33□□□□□ -0.924e-6■□□□□ 11.1
PAPD4-203ENST00000428308 CROCC2H7BZ55 1655 aa9.33□□□□□ -0.92
PAPD4-203ENST00000428308 A2MP01023 1474 aa9.33□□□□□ -0.92
PAPD4-203ENST00000428308 MIA2Q96PC5 1412 aa9.33□□□□□ -0.92
PAPD4-203ENST00000428308 PREX1Q8TCU6 1659 aa9.33□□□□□ -0.92
PAPD4-203ENST00000428308 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
PAPD4-203ENST00000428308 NCOA1Q15788 1441 aa9.33□□□□□ -0.92
PAPD4-203ENST00000428308 DNMT1P26358 1616 aaKnown RBP9.32□□□□□ -0.92
PAPD4-203ENST00000428308 UBAP1LF5GYI3 381 aa9.32□□□□□ -0.92
PAPD4-203ENST00000428308 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
PAPD4-203ENST00000428308 AGLP35573 1532 aa9.32□□□□□ -0.92
PAPD4-203ENST00000428308 C3P01024 1663 aa9.32□□□□□ -0.92
PAPD4-203ENST00000428308 PTPRTO14522 1441 aa9.32□□□□□ -0.92
PAPD4-203ENST00000428308 KDM4CQ9H3R0 1056 aa9.32□□□□□ -0.92
PAPD4-203ENST00000428308 ARHGEF5Q12774 1597 aa9.31□□□□□ -0.92
PAPD4-203ENST00000428308 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
PAPD4-203ENST00000428308 SOCS7O14512 581 aa9.31□□□□□ -0.92
PAPD4-203ENST00000428308 LTBP4Q8N2S1 1624 aa9.31□□□□□ -0.92
PAPD4-203ENST00000428308 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
PAPD4-203ENST00000428308 KIF15Q9NS87 1388 aa9.31□□□□□ -0.92
PAPD4-203ENST00000428308 CLTCQ00610 1675 aaKnown RBP9.31□□□□□ -0.92
PAPD4-203ENST00000428308 GZF1Q9H116 711 aaPredicted RBP9.3□□□□□ -0.92
PAPD4-203ENST00000428308 SETD1BQ9UPS6 1966 aaKnown RBP9.3□□□□□ -0.92
PAPD4-203ENST00000428308 CAMSAP1Q5T5Y3 1602 aa9.3□□□□□ -0.92
PAPD4-203ENST00000428308 REREQ9P2R6 1566 aa9.3□□□□□ -0.92
PAPD4-203ENST00000428308 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
PAPD4-203ENST00000428308 STK25O00506 426 aa9.29□□□□□ -0.92
PAPD4-203ENST00000428308 SEMA3EO15041 775 aa9.29□□□□□ -0.92
PAPD4-203ENST00000428308 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
PAPD4-203ENST00000428308 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
PAPD4-203ENST00000428308 DHX37Q8IY37 1157 aaKnown RBP9.28□□□□□ -0.92
PAPD4-203ENST00000428308 DHX29Q7Z478 1369 aaKnown RBP9.28□□□□□ -0.92
PAPD4-203ENST00000428308 E9PSI1 815 aa9.28□□□□□ -0.92
PAPD4-203ENST00000428308 POLA2Q14181 598 aa9.28□□□□□ -0.92
PAPD4-203ENST00000428308 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
PAPD4-203ENST00000428308 CEP152O94986 1710 aa9.28□□□□□ -0.92
PAPD4-203ENST00000428308 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
PAPD4-203ENST00000428308 MIER1Q8N108 512 aa9.27□□□□□ -0.93
PAPD4-203ENST00000428308 NPATQ14207 1427 aa9.27□□□□□ -0.93
PAPD4-203ENST00000428308 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
PAPD4-203ENST00000428308 TRAK2O60296 914 aa9.26□□□□□ -0.93
PAPD4-203ENST00000428308 USP35Q9P2H5 1018 aa9.26□□□□□ -0.93
PAPD4-203ENST00000428308 RTEL1-TNFRSF6BF6WH68 1400 aa9.26□□□□□ -0.93
PAPD4-203ENST00000428308 WASHC2CQ9Y4E1 1318 aa9.26□□□□□ -0.93
PAPD4-203ENST00000428308 MROH1Q8NDA8 1641 aa9.26□□□□□ -0.93
PAPD4-203ENST00000428308 HSPA1LP34931 641 aa9.25□□□□□ -0.93
PAPD4-203ENST00000428308 FLIIQ13045 1269 aa9.25□□□□□ -0.93
PAPD4-203ENST00000428308 CLUAP1Q96AJ1 413 aa9.25□□□□□ -0.93
PAPD4-203ENST00000428308 RRBP1Q9P2E9 1410 aaKnown RBP9.25□□□□□ -0.93
PAPD4-203ENST00000428308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.25□□□□□ -0.93
PAPD4-203ENST00000428308 MAST1Q9Y2H9 1570 aa9.25□□□□□ -0.93
PAPD4-203ENST00000428308 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
PAPD4-203ENST00000428308 AK7Q96M32 723 aa9.24□□□□□ -0.93
PAPD4-203ENST00000428308 ANKRD30AQ9BXX3 1397 aa9.24□□□□□ -0.93
PAPD4-203ENST00000428308 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
PAPD4-203ENST00000428308 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
PAPD4-203ENST00000428308 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
PAPD4-203ENST00000428308 SHANK2Q9UPX8 1470 aa9.23□□□□□ -0.93
PAPD4-203ENST00000428308 ANKRD50Q9ULJ7 1429 aa9.22□□□□□ -0.93
PAPD4-203ENST00000428308 TNRQ92752 1358 aa9.22□□□□□ -0.93
PAPD4-203ENST00000428308 DUOX2Q9NRD8 1548 aa9.22□□□□□ -0.93
PAPD4-203ENST00000428308 A6NJR5 290 aa9.21□□□□□ -0.93
PAPD4-203ENST00000428308 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.93
PAPD4-203ENST00000428308 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.93
PAPD4-203ENST00000428308 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.94
PAPD4-203ENST00000428308 CEP170BQ9Y4F5 1589 aaPredicted RBP9.21□□□□□ -0.94
PAPD4-203ENST00000428308 RETREG2Q8NC44 543 aa9.2□□□□□ -0.94
PAPD4-203ENST00000428308 ABCC3O15438 1527 aa9.2□□□□□ -0.94
PAPD4-203ENST00000428308 PLA2R1Q13018 1463 aa9.2□□□□□ -0.94
PAPD4-203ENST00000428308 ADGRL2O95490 1459 aa9.19□□□□□ -0.94
PAPD4-203ENST00000428308 THEMISQ8N1K5 641 aaPredicted RBP9.19□□□□□ -0.94
PAPD4-203ENST00000428308 RNF17Q9BXT8 1623 aaKnown RBP9.19□□□□□ -0.94
PAPD4-203ENST00000428308 UGGT1Q9NYU2 1555 aa9.19□□□□□ -0.94
PAPD4-203ENST00000428308 KDM5DQ9BY66 1539 aa9.19□□□□□ -0.94
PAPD4-203ENST00000428308 NAIPQ13075 1403 aa9.19□□□□□ -0.94
PAPD4-203ENST00000428308 TOM1O60784 492 aa9.19□□□□□ -0.94
PAPD4-203ENST00000428308 FAM177A1Q8N128 213 aaPredicted RBP9.19□□□□□ -0.94
PAPD4-203ENST00000428308 MYO3AQ8NEV4 1616 aa9.19□□□□□ -0.94
PAPD4-203ENST00000428308 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
PAPD4-203ENST00000428308 A2ML1A8K2U0 1454 aa9.18□□□□□ -0.94
PAPD4-203ENST00000428308 IRF5Q13568 498 aa9.18□□□□□ -0.94
PAPD4-203ENST00000428308 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
PAPD4-203ENST00000428308 NUTM2DQ5VT03 806 aaPredicted RBP9.17□□□□□ -0.94
PAPD4-203ENST00000428308 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
PAPD4-203ENST00000428308 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
PAPD4-203ENST00000428308 POLR3GLQ9BT43 218 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms