RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
COMMD1-202ENST00000427417 XIRP1Q702N8 1843 aaKnown RBP15.4■□□□□ 0.06
COMMD1-202ENST00000427417 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
COMMD1-202ENST00000427417 CHGAP10645 457 aaKnown RBP15.38■□□□□ 0.05
COMMD1-202ENST00000427417 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
COMMD1-202ENST00000427417 RBM33Q96EV2 1170 aaKnown RBP15.37■□□□□ 0.05
COMMD1-202ENST00000427417 BCANQ96GW7 911 aa15.37■□□□□ 0.05
COMMD1-202ENST00000427417 NAIPQ13075 1403 aa15.36■□□□□ 0.05
COMMD1-202ENST00000427417 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
COMMD1-202ENST00000427417 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
COMMD1-202ENST00000427417 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
COMMD1-202ENST00000427417 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
COMMD1-202ENST00000427417 PLEKHG1Q9ULL1 1385 aa15.34■□□□□ 0.05
COMMD1-202ENST00000427417 HFM1A2PYH4 1435 aa15.34■□□□□ 0.05
COMMD1-202ENST00000427417 KCNA6P17658 529 aa15.33■□□□□ 0.04
COMMD1-202ENST00000427417 TMEM94Q12767 1356 aa15.33■□□□□ 0.04
COMMD1-202ENST00000427417 NWD1Q149M9 1564 aa15.32■□□□□ 0.04
COMMD1-202ENST00000427417 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
COMMD1-202ENST00000427417 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
COMMD1-202ENST00000427417 PROSER2Q86WR7 435 aaPredicted RBP15.3■□□□□ 0.04
COMMD1-202ENST00000427417 TRIM52Q96A61 297 aa15.29■□□□□ 0.04
COMMD1-202ENST00000427417 NKTRP30414 1462 aaKnown RBP15.28■□□□□ 0.04
COMMD1-202ENST00000427417 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
COMMD1-202ENST00000427417 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
COMMD1-202ENST00000427417 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.04
COMMD1-202ENST00000427417 TRPM2O94759 1503 aa15.26■□□□□ 0.03
COMMD1-202ENST00000427417 CLTCL1P53675 1640 aa15.25■□□□□ 0.03
COMMD1-202ENST00000427417 DIP2AQ14689 1571 aa15.25■□□□□ 0.03
COMMD1-202ENST00000427417 ZNF326Q5BKZ1 582 aaKnown RBP15.25■□□□□ 0.03
COMMD1-202ENST00000427417 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
COMMD1-202ENST00000427417 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
COMMD1-202ENST00000427417 ROBO1Q9Y6N7 1651 aa15.23■□□□□ 0.03
COMMD1-202ENST00000427417 ACIN1Q9UKV3 1341 aaKnown RBP15.22■□□□□ 0.03
COMMD1-202ENST00000427417 NRXN3Q9Y4C0 1643 aa15.22■□□□□ 0.03
COMMD1-202ENST00000427417 SOCS7O14512 581 aa15.22■□□□□ 0.03
COMMD1-202ENST00000427417 MSH6P52701 1360 aa15.22■□□□□ 0.03
COMMD1-202ENST00000427417 FAM135BQ49AJ0 1406 aa15.21■□□□□ 0.03
COMMD1-202ENST00000427417 PTPRUQ92729 1446 aa15.21■□□□□ 0.03
COMMD1-202ENST00000427417 NCOA3Q9Y6Q9 1424 aa15.21■□□□□ 0.03
COMMD1-202ENST00000427417 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
COMMD1-202ENST00000427417 KIF1BO60333 1816 aa15.18■□□□□ 0.02
COMMD1-202ENST00000427417 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
COMMD1-202ENST00000427417 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
COMMD1-202ENST00000427417 SETBP1Q9Y6X0 1596 aa15.18■□□□□ 0.02
COMMD1-202ENST00000427417 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
COMMD1-202ENST00000427417 FOXD1Q16676 465 aa15.16■□□□□ 0.02
COMMD1-202ENST00000427417 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.16■□□□□ 0.02
COMMD1-202ENST00000427417 RPGRIP1LQ68CZ1 1315 aa15.16■□□□□ 0.02
COMMD1-202ENST00000427417 XRN1Q8IZH2 1706 aaKnown RBP15.15■□□□□ 0.02
COMMD1-202ENST00000427417 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
COMMD1-202ENST00000427417 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
COMMD1-202ENST00000427417 SLAIN2Q9P270 581 aa15.15■□□□□ 0.02
COMMD1-202ENST00000427417 METP08581 1390 aa15.14■□□□□ 0.01
COMMD1-202ENST00000427417 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
COMMD1-202ENST00000427417 CCDC144AA2RUR9 1427 aa15.13■□□□□ 0.01
COMMD1-202ENST00000427417 CADPS2Q86UW7 1296 aa15.13■□□□□ 0.01
COMMD1-202ENST00000427417 SETD5Q9C0A6 1442 aa15.13■□□□□ 0.01
COMMD1-202ENST00000427417 C19orf44Q9H6X5 657 aa15.13■□□□□ 0.01
COMMD1-202ENST00000427417 ATF3P18847 181 aa15.12■□□□□ 0.01
COMMD1-202ENST00000427417 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
COMMD1-202ENST00000427417 SETD1AO15047 1707 aaKnown RBP15.09■□□□□ 0.01
COMMD1-202ENST00000427417 COL16A1Q07092 1604 aaPredicted RBP15.09■□□□□ 0.01
COMMD1-202ENST00000427417 PPLO60437 1756 aa15.08■□□□□ 0
COMMD1-202ENST00000427417 DCCP43146 1447 aa15.08■□□□□ 0
COMMD1-202ENST00000427417 NALCNQ8IZF0 1738 aa15.07■□□□□ 0
COMMD1-202ENST00000427417 RAB3GAP2Q9H2M9 1393 aa15.06■□□□□ 0
COMMD1-202ENST00000427417 BRINP3Q76B58 766 aa15.05■□□□□ -0
COMMD1-202ENST00000427417 ANKRD30BQ9BXX2 1392 aa15.05■□□□□ -0
COMMD1-202ENST00000427417 JCADQ9P266 1359 aa15.05■□□□□ -0
COMMD1-202ENST00000427417 AHDC1Q5TGY3 1603 aaPredicted RBP15.04■□□□□ -0
COMMD1-202ENST00000427417 MST1RQ04912 1400 aa15.04■□□□□ -0
COMMD1-202ENST00000427417 PTCH1Q13635 1447 aa15.04■□□□□ -0
COMMD1-202ENST00000427417 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
COMMD1-202ENST00000427417 RGL3Q3MIN7 710 aa15.04■□□□□ -0
COMMD1-202ENST00000427417 ADGRL3Q9HAR2 1447 aa15.03■□□□□ -0
COMMD1-202ENST00000427417 ASXL1Q8IXJ9 1541 aa15.02■□□□□ -0
COMMD1-202ENST00000427417 ROBO2Q9HCK4 1378 aa15.02■□□□□ -0
COMMD1-202ENST00000427417 ADGRF5Q8IZF2 1346 aa15.02■□□□□ -0
COMMD1-202ENST00000427417 POTEAQ6S8J7 498 aa15.02■□□□□ -0
COMMD1-202ENST00000427417 LRP6O75581 1613 aa15.02□□□□□ -0.01
COMMD1-202ENST00000427417 PRAG1Q86YV5 1406 aa15.01□□□□□ -0.01
COMMD1-202ENST00000427417 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
COMMD1-202ENST00000427417 IFT172Q9UG01 1749 aa15□□□□□ -0.01
COMMD1-202ENST00000427417 HRCP23327 699 aa15□□□□□ -0.01
COMMD1-202ENST00000427417 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
COMMD1-202ENST00000427417 SHPRHQ149N8 1683 aa14.98□□□□□ -0.01
COMMD1-202ENST00000427417 PIK3C2GO75747 1445 aa14.96□□□□□ -0.01
COMMD1-202ENST00000427417 C1orf167Q5SNV9 1468 aa14.95□□□□□ -0.02
COMMD1-202ENST00000427417 SPATA31A6Q5VVP1 1343 aa14.95□□□□□ -0.02
COMMD1-202ENST00000427417 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
COMMD1-202ENST00000427417 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
COMMD1-202ENST00000427417 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
COMMD1-202ENST00000427417 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
COMMD1-202ENST00000427417 STK26Q9P289 416 aa14.95□□□□□ -0.02
COMMD1-202ENST00000427417 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
COMMD1-202ENST00000427417 ORAI2Q96SN7 254 aa14.94□□□□□ -0.02
COMMD1-202ENST00000427417 LRPPRCP42704 1394 aaKnown RBP14.94□□□□□ -0.02
COMMD1-202ENST00000427417 MYOM2P54296 1465 aa14.94□□□□□ -0.02
COMMD1-202ENST00000427417 TECPR2O15040 1411 aa14.93□□□□□ -0.02
COMMD1-202ENST00000427417 ABCC11Q96J66 1382 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms