RNA–Protein interactions for RNA: ENST00000427234.5

ITSN2-207, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-207ENST00000427234 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
ITSN2-207ENST00000427234 NAIPQ13075 1403 aa16.65■□□□□ 0.26
ITSN2-207ENST00000427234 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
ITSN2-207ENST00000427234 ADGRB3O60242 1522 aa16.65■□□□□ 0.26
ITSN2-207ENST00000427234 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
ITSN2-207ENST00000427234 E9PCH4 1651 aa16.62■□□□□ 0.25
ITSN2-207ENST00000427234 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
ITSN2-207ENST00000427234 TOM1O60784 492 aa16.61■□□□□ 0.25
ITSN2-207ENST00000427234 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
ITSN2-207ENST00000427234 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
ITSN2-207ENST00000427234 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
ITSN2-207ENST00000427234 ZFYVE9O95405 1425 aa16.58■□□□□ 0.24
ITSN2-207ENST00000427234 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.24
ITSN2-207ENST00000427234 TMEM131LA2VDJ0 1609 aa16.57■□□□□ 0.24
ITSN2-207ENST00000427234 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
ITSN2-207ENST00000427234 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
ITSN2-207ENST00000427234 KCNA6P17658 529 aa16.57■□□□□ 0.24
ITSN2-207ENST00000427234 BCANQ96GW7 911 aa16.57■□□□□ 0.24
ITSN2-207ENST00000427234 PLEKHG1Q9ULL1 1385 aa16.56■□□□□ 0.24
ITSN2-207ENST00000427234 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
ITSN2-207ENST00000427234 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
ITSN2-207ENST00000427234 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
ITSN2-207ENST00000427234 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
ITSN2-207ENST00000427234 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
ITSN2-207ENST00000427234 MYO5BQ9ULV0 1848 aa16.51■□□□□ 0.23
ITSN2-207ENST00000427234 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
ITSN2-207ENST00000427234 PROSER2Q86WR7 435 aaPredicted RBP16.49■□□□□ 0.23
ITSN2-207ENST00000427234 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
ITSN2-207ENST00000427234 ZNF326Q5BKZ1 582 aaKnown RBP16.48■□□□□ 0.23
ITSN2-207ENST00000427234 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
ITSN2-207ENST00000427234 TRPM2O94759 1503 aa16.47■□□□□ 0.23
ITSN2-207ENST00000427234 ACIN1Q9UKV3 1341 aaKnown RBP16.46■□□□□ 0.23
ITSN2-207ENST00000427234 ADAMTS13Q76LX8 1427 aa16.46■□□□□ 0.23
ITSN2-207ENST00000427234 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
ITSN2-207ENST00000427234 HSPA1LP34931 641 aa16.46■□□□□ 0.23
ITSN2-207ENST00000427234 NKTRP30414 1462 aaKnown RBP16.45■□□□□ 0.22
ITSN2-207ENST00000427234 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
ITSN2-207ENST00000427234 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
ITSN2-207ENST00000427234 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
ITSN2-207ENST00000427234 CLTCL1P53675 1640 aa16.42■□□□□ 0.22
ITSN2-207ENST00000427234 RBM33Q96EV2 1170 aaKnown RBP16.42■□□□□ 0.22
ITSN2-207ENST00000427234 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
ITSN2-207ENST00000427234 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
ITSN2-207ENST00000427234 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
ITSN2-207ENST00000427234 DISP3Q9P2K9 1392 aa16.4■□□□□ 0.22
ITSN2-207ENST00000427234 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
ITSN2-207ENST00000427234 RPGRIP1LQ68CZ1 1315 aa16.4■□□□□ 0.22
ITSN2-207ENST00000427234 CHD2O14647 1828 aaKnown RBP16.4■□□□□ 0.22
ITSN2-207ENST00000427234 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
ITSN2-207ENST00000427234 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
ITSN2-207ENST00000427234 MSH6P52701 1360 aa16.38■□□□□ 0.21
ITSN2-207ENST00000427234 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
ITSN2-207ENST00000427234 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
ITSN2-207ENST00000427234 NEXMIFQ5QGS0 1516 aa16.37■□□□□ 0.21
ITSN2-207ENST00000427234 KIF1BO60333 1816 aa16.36■□□□□ 0.21
ITSN2-207ENST00000427234 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
ITSN2-207ENST00000427234 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
ITSN2-207ENST00000427234 METP08581 1390 aa16.35■□□□□ 0.21
ITSN2-207ENST00000427234 CCDC144AA2RUR9 1427 aa16.35■□□□□ 0.21
ITSN2-207ENST00000427234 C14orf37Q86TY3 774 aa16.34■□□□□ 0.21
ITSN2-207ENST00000427234 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
ITSN2-207ENST00000427234 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
ITSN2-207ENST00000427234 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
ITSN2-207ENST00000427234 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
ITSN2-207ENST00000427234 HRCP23327 699 aa16.31■□□□□ 0.2
ITSN2-207ENST00000427234 ATF3P18847 181 aa16.3■□□□□ 0.2
ITSN2-207ENST00000427234 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
ITSN2-207ENST00000427234 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
ITSN2-207ENST00000427234 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.2
ITSN2-207ENST00000427234 ILDR2Q71H61 639 aa16.27■□□□□ 0.2
ITSN2-207ENST00000427234 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
ITSN2-207ENST00000427234 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
ITSN2-207ENST00000427234 ROBO1Q9Y6N7 1651 aa16.25■□□□□ 0.19
ITSN2-207ENST00000427234 DCCP43146 1447 aa16.25■□□□□ 0.19
ITSN2-207ENST00000427234 PPLO60437 1756 aa16.24■□□□□ 0.19
ITSN2-207ENST00000427234 MED1Q15648 1581 aaPredicted RBP16.24■□□□□ 0.19
ITSN2-207ENST00000427234 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.24■□□□□ 0.19
ITSN2-207ENST00000427234 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
ITSN2-207ENST00000427234 PTCH1Q13635 1447 aa16.22■□□□□ 0.19
ITSN2-207ENST00000427234 PRAG1Q86YV5 1406 aa16.21■□□□□ 0.19
ITSN2-207ENST00000427234 ROBO2Q9HCK4 1378 aa16.21■□□□□ 0.19
ITSN2-207ENST00000427234 ADGRL3Q9HAR2 1447 aa16.2■□□□□ 0.18
ITSN2-207ENST00000427234 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
ITSN2-207ENST00000427234 BRINP3Q76B58 766 aa16.19■□□□□ 0.18
ITSN2-207ENST00000427234 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
ITSN2-207ENST00000427234 MST1RQ04912 1400 aa16.18■□□□□ 0.18
ITSN2-207ENST00000427234 JCADQ9P266 1359 aa16.17■□□□□ 0.18
ITSN2-207ENST00000427234 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
ITSN2-207ENST00000427234 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
ITSN2-207ENST00000427234 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
ITSN2-207ENST00000427234 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 SOCS7O14512 581 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 STK26Q9P289 416 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 IFT172Q9UG01 1749 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 NRXN1Q9ULB1 1477 aa16.15■□□□□ 0.18
ITSN2-207ENST00000427234 TECPR2O15040 1411 aa16.14■□□□□ 0.17
ITSN2-207ENST00000427234 AHDC1Q5TGY3 1603 aaPredicted RBP16.14■□□□□ 0.17
ITSN2-207ENST00000427234 MYOM2P54296 1465 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms