RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 MYO6Q9UM54 1294 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 DEF6Q9H4E7 631 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 ANKRD30AQ9BXX3 1397 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 RIPPLY1Q0D2K3 151 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 RRAGDQ9NQL2 400 aaPredicted RBP3.1□□□□□ -1.91
NEB-209ENST00000427231 DNAJC5BQ9UF47 199 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 GOLGA6L4A6NEF3 574 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 PDCP20941 246 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 NUCB2P80303 420 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 UACAQ9BZF9 1416 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 PNISRQ8TF01 805 aaKnown RBP3.1□□□□□ -1.91
NEB-209ENST00000427231 ABCC8Q09428 1581 aa3.1□□□□□ -1.91
NEB-209ENST00000427231 MYCNP04198 464 aaPredicted RBP3.1□□□□□ -1.91
NEB-209ENST00000427231 FAM184AQ8NB25 1140 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 HOOK3Q86VS8 718 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 ARID3CA6NKF2 412 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 TRIM6-TRIM34B2RNG4 842 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 ARID4AP29374 1257 aaPredicted RBP3.09□□□□□ -1.91
NEB-209ENST00000427231 TRIM34Q9BYJ4 488 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 SCAPERQ9BY12 1400 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 SRRTQ9BXP5 876 aaKnown RBP3.09□□□□□ -1.91
NEB-209ENST00000427231 ST18O60284 1047 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 PIP4K2AP48426 406 aaPredicted RBP3.09□□□□□ -1.91
NEB-209ENST00000427231 TMX4Q9H1E5 349 aaPredicted RBP3.09□□□□□ -1.91
NEB-209ENST00000427231 MCM5P33992 734 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 KAT6BQ8WYB5 2073 aa3.09□□□□□ -1.91
NEB-209ENST00000427231 ABCC9O60706 1549 aa3.09□□□□□ -1.92
NEB-209ENST00000427231 RPGRIP1LQ68CZ1 1315 aa3.09□□□□□ -1.92
NEB-209ENST00000427231 GTF2F1P35269 517 aaKnown RBP eCLIP3.09□□□□□ -1.92
NEB-209ENST00000427231 RDXP35241 583 aaKnown RBP3.09□□□□□ -1.92
NEB-209ENST00000427231 SRPK2P78362 688 aaKnown RBP3.09□□□□□ -1.92
NEB-209ENST00000427231 DRC1Q96MC2 740 aa3.09□□□□□ -1.92
NEB-209ENST00000427231 CASTP20810 708 aaKnown RBP3.09□□□□□ -1.92
NEB-209ENST00000427231 STK11IPQ8N1F8 1099 aa3.09□□□□□ -1.92
NEB-209ENST00000427231 DCAF11Q8TEB1 546 aa3.09□□□□□ -1.92
NEB-209ENST00000427231 FAM107BQ9H098 131 aa3.09□□□□□ -1.92
NEB-209ENST00000427231 TPM1P09493 284 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 FMN1Q68DA7 1419 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 CDR1P51861 262 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 DDX12PQ92771 950 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 KIAA2012Q0VF49 1180 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 FEZ1Q99689 392 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 BCCIPQ9P287 314 aaKnown RBP eCLIP3.08□□□□□ -1.92
NEB-209ENST00000427231 CARMIL1Q5VZK9 1371 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 MLECQ14165 292 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 ERCC4Q92889 916 aaPredicted RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 TERF2IPQ9NYB0 399 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 RGL3Q3MIN7 710 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 CCDC70Q6NSX1 233 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 CCDC196A0A1B0GTZ2 297 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 TSC1Q92574 1164 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 JPH4Q96JJ6 628 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 DHX57Q6P158 1386 aaKnown RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 REC8O95072 547 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 FOXD4L6Q3SYB3 417 aaPredicted RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 FOXD4L3Q6VB84 417 aaPredicted RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 MIA2Q96PC5 1412 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 UQCRHLA0A096LP55 91 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 UQCRHP07919 91 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 BABAM1Q9NWV8 329 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 TAOK2Q9UL54 1235 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 LUC7LQ9NQ29 371 aaKnown RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 DHX29Q7Z478 1369 aaKnown RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 TDO2P48775 406 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 CCAR2Q8N163 923 aaKnown RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 MFAP1P55081 439 aaKnown RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 MRS2Q9HD23 443 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 BIN2Q9UBW5 565 aaPredicted RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 RUFY2Q8WXA3 655 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 CARD11Q9BXL7 1154 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 CGNL1Q0VF96 1302 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 KIF2AO00139 706 aaPredicted RBP3.08□□□□□ -1.92
NEB-209ENST00000427231 PDE3AQ14432 1141 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 TEX2Q8IWB9 1127 aa3.08□□□□□ -1.92
NEB-209ENST00000427231 DHX16O60231 1041 aaKnown RBP3.07□□□□□ -1.92
NEB-209ENST00000427231 LMNB2Q03252 620 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 TUBB2AQ13885 445 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 HS1BP3Q53T59 392 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 TUBB2BQ9BVA1 445 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 SRCIN1Q9C0H9 1055 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 ACBD3Q9H3P7 528 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 TRAF1Q13077 416 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 TSPYL1Q9H0U9 437 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 CIZ1Q9ULV3 898 aaPredicted RBP3.07□□□□□ -1.92
NEB-209ENST00000427231 CENPQQ7L2Z9 268 aaPredicted RBP3.07□□□□□ -1.92
NEB-209ENST00000427231 ANKRD30BQ9BXX2 1392 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 MCM3P25205 808 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 FAM212AQ96EL1 285 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.07□□□□□ -1.92
NEB-209ENST00000427231 A0A0G2JS52 829 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 PDS5BQ9NTI5 1447 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 PHF23Q9BUL5 403 aaPredicted RBP3.07□□□□□ -1.92
NEB-209ENST00000427231 KANK1Q14678 1352 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 ANKRD1Q15327 319 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 KCNG1Q9UIX4 513 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 USH1CQ9Y6N9 552 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 RNF20Q5VTR2 975 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 ESPNB1AK53 854 aa3.07□□□□□ -1.92
NEB-209ENST00000427231 PPP1R15AO75807 674 aaPredicted RBP3.07□□□□□ -1.92
NEB-209ENST00000427231 HDGFL2Q7Z4V5 671 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms