RNA–Protein interactions for RNA: ENST00000427217.5

ARPC1B-205, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 3

Gene ARPC1B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-205ENST00000427217 CHGAP10645 457 aaKnown RBP29.58■■■□□ 2.33
ARPC1B-205ENST00000427217 IFT172Q9UG01 1749 aa29.57■■■□□ 2.32
ARPC1B-205ENST00000427217 NEXMIFQ5QGS0 1516 aa29.57■■■□□ 2.32
ARPC1B-205ENST00000427217 LTKP29376 864 aa29.57■■■□□ 2.32
ARPC1B-205ENST00000427217 TXNDC2Q86VQ3 553 aa29.57■■■□□ 2.32
ARPC1B-205ENST00000427217 ANKRD30BQ9BXX2 1392 aa29.56■■■□□ 2.32
ARPC1B-205ENST00000427217 HDGFP51858 240 aaKnown RBP29.53■■■□□ 2.32
ARPC1B-205ENST00000427217 SPATA31E1Q6ZUB1 1445 aa29.52■■■□□ 2.32
ARPC1B-205ENST00000427217 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.51■■■□□ 2.31
ARPC1B-205ENST00000427217 PLEKHG1Q9ULL1 1385 aa29.5■■■□□ 2.31
ARPC1B-205ENST00000427217 DIP2AQ14689 1571 aa29.47■■■□□ 2.31
ARPC1B-205ENST00000427217 ZNF326Q5BKZ1 582 aaKnown RBP29.46■■■□□ 2.31
ARPC1B-205ENST00000427217 SETBP1Q9Y6X0 1596 aa29.46■■■□□ 2.31
ARPC1B-205ENST00000427217 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.31
ARPC1B-205ENST00000427217 LTBP4Q8N2S1 1624 aa29.45■■■□□ 2.3
ARPC1B-205ENST00000427217 RPGRIP1LQ68CZ1 1315 aa29.45■■■□□ 2.3
ARPC1B-205ENST00000427217 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
ARPC1B-205ENST00000427217 STRCP1A6NGW2 1772 aa29.43■■■□□ 2.3
ARPC1B-205ENST00000427217 DHX57Q6P158 1386 aaKnown RBP29.42■■■□□ 2.3
ARPC1B-205ENST00000427217 CHD2O14647 1828 aaKnown RBP29.4■■■□□ 2.3
ARPC1B-205ENST00000427217 SETD1AO15047 1707 aaKnown RBP29.38■■■□□ 2.29
ARPC1B-205ENST00000427217 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
ARPC1B-205ENST00000427217 FBXO41Q8TF61 875 aa29.37■■■□□ 2.29
ARPC1B-205ENST00000427217 ADAMTS13Q76LX8 1427 aa29.37■■■□□ 2.29
ARPC1B-205ENST00000427217 CPS1P31327 1500 aa29.36■■■□□ 2.29
ARPC1B-205ENST00000427217 NWD1Q149M9 1564 aa29.36■■■□□ 2.29
ARPC1B-205ENST00000427217 ZNF335Q9H4Z2 1342 aaPredicted RBP29.36■■■□□ 2.29
ARPC1B-205ENST00000427217 NUTM2DQ5VT03 806 aaPredicted RBP29.35■■■□□ 2.29
ARPC1B-205ENST00000427217 VGFO15240 615 aaPredicted RBP29.33■■■□□ 2.29
ARPC1B-205ENST00000427217 MYOM2P54296 1465 aa29.33■■■□□ 2.29
ARPC1B-205ENST00000427217 IQSEC2Q5JU85 1478 aa29.3■■■□□ 2.28
ARPC1B-205ENST00000427217 RGL3Q3MIN7 710 aa29.3■■■□□ 2.28
ARPC1B-205ENST00000427217 SLC26A8Q96RN1 970 aa29.29■■■□□ 2.28
ARPC1B-205ENST00000427217 TBX22Q9Y458 520 aa29.29■■■□□ 2.28
ARPC1B-205ENST00000427217 PIK3R4Q99570 1358 aa29.28■■■□□ 2.28
ARPC1B-205ENST00000427217 LAMC1P11047 1609 aa29.28■■■□□ 2.28
ARPC1B-205ENST00000427217 BCANQ96GW7 911 aa29.28■■■□□ 2.28
ARPC1B-205ENST00000427217 ALKQ9UM73 1620 aa29.27■■■□□ 2.28
ARPC1B-205ENST00000427217 NRXN1Q9ULB1 1477 aa29.27■■■□□ 2.28
ARPC1B-205ENST00000427217 XIRP1Q702N8 1843 aaKnown RBP29.26■■■□□ 2.27
ARPC1B-205ENST00000427217 NKTRP30414 1462 aaKnown RBP29.25■■■□□ 2.27
ARPC1B-205ENST00000427217 XRN1Q8IZH2 1706 aaKnown RBP29.25■■■□□ 2.27
ARPC1B-205ENST00000427217 PIK3C2GO75747 1445 aa29.24■■■□□ 2.27
ARPC1B-205ENST00000427217 CERKQ8TCT0 537 aa29.24■■■□□ 2.27
ARPC1B-205ENST00000427217 ADGRF5Q8IZF2 1346 aa29.2■■■□□ 2.27
ARPC1B-205ENST00000427217 KCNA6P17658 529 aa29.2■■■□□ 2.26
ARPC1B-205ENST00000427217 STAC3Q96MF2 364 aa29.2■■■□□ 2.26
ARPC1B-205ENST00000427217 SENP3Q9H4L4 574 aaPredicted RBP29.19■■■□□ 2.26
ARPC1B-205ENST00000427217 LRRC7Q96NW7 1537 aa29.19■■■□□ 2.26
ARPC1B-205ENST00000427217 METP08581 1390 aa29.14■■■□□ 2.26
ARPC1B-205ENST00000427217 KNDC1Q76NI1 1749 aa29.14■■■□□ 2.26
ARPC1B-205ENST00000427217 PTPRUQ92729 1446 aa29.14■■■□□ 2.26
ARPC1B-205ENST00000427217 KIAA1210Q9ULL0 1709 aa29.14■■■□□ 2.25
ARPC1B-205ENST00000427217 PRAG1Q86YV5 1406 aa29.12■■■□□ 2.25
ARPC1B-205ENST00000427217 ASXL1Q8IXJ9 1541 aa29.11■■■□□ 2.25
ARPC1B-205ENST00000427217 DCAF11Q8TEB1 546 aa29.11■■■□□ 2.25
ARPC1B-205ENST00000427217 SIN3AQ96ST3 1273 aa29.11■■■□□ 2.25
ARPC1B-205ENST00000427217 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
ARPC1B-205ENST00000427217 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
ARPC1B-205ENST00000427217 C14orf93Q9H972 538 aaKnown RBP29.05■■■□□ 2.24
ARPC1B-205ENST00000427217 AMOTL2Q9Y2J4 779 aa29.05■■■□□ 2.24
ARPC1B-205ENST00000427217 PTCH1Q13635 1447 aa29.04■■■□□ 2.24
ARPC1B-205ENST00000427217 NEUROD1Q13562 356 aa29.03■■■□□ 2.24
ARPC1B-205ENST00000427217 KDM2AQ9Y2K7 1162 aa29.03■■■□□ 2.24
ARPC1B-205ENST00000427217 TMEM94Q12767 1356 aa29.02■■■□□ 2.24
ARPC1B-205ENST00000427217 ADGRB1O14514 1584 aa29.02■■■□□ 2.24
ARPC1B-205ENST00000427217 PROSER2Q86WR7 435 aaPredicted RBP29.01■■■□□ 2.23
ARPC1B-205ENST00000427217 TECPR2O15040 1411 aa29.01■■■□□ 2.23
ARPC1B-205ENST00000427217 L3MBTL2Q969R5 705 aa29■■■□□ 2.23
ARPC1B-205ENST00000427217 NALCNQ8IZF0 1738 aa28.98■■■□□ 2.23
ARPC1B-205ENST00000427217 LRPPRCP42704 1394 aaKnown RBP28.98■■■□□ 2.23
ARPC1B-205ENST00000427217 TRPM1Q7Z4N2 1603 aa28.98■■■□□ 2.23
ARPC1B-205ENST00000427217 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.97■■■□□ 2.23
ARPC1B-205ENST00000427217 YTHDC2Q9H6S0 1430 aaKnown RBP28.97■■■□□ 2.23
ARPC1B-205ENST00000427217 CFAP70Q5T0N1 1121 aa28.97■■■□□ 2.23
ARPC1B-205ENST00000427217 TONSLQ96HA7 1378 aa28.95■■■□□ 2.22
ARPC1B-205ENST00000427217 ABCC11Q96J66 1382 aa28.95■■■□□ 2.22
ARPC1B-205ENST00000427217 DLC1Q96QB1 1528 aa28.93■■■□□ 2.22
ARPC1B-205ENST00000427217 ARHGEF28Q8N1W1 1705 aaKnown RBP28.91■■■□□ 2.22
ARPC1B-205ENST00000427217 ROBO2Q9HCK4 1378 aa28.91■■■□□ 2.22
ARPC1B-205ENST00000427217 TMEM132EQ6IEE7 984 aa28.91■■■□□ 2.22
ARPC1B-205ENST00000427217 MSH6P52701 1360 aa28.9■■■□□ 2.22
ARPC1B-205ENST00000427217 DCCP43146 1447 aa28.89■■■□□ 2.22
ARPC1B-205ENST00000427217 FAM135BQ49AJ0 1406 aa28.88■■■□□ 2.21
ARPC1B-205ENST00000427217 ADGRL3Q9HAR2 1447 aa28.88■■■□□ 2.21
ARPC1B-205ENST00000427217 TOM1O60784 492 aa28.87■■■□□ 2.21
ARPC1B-205ENST00000427217 RBM33Q96EV2 1170 aaKnown RBP28.87■■■□□ 2.21
ARPC1B-205ENST00000427217 CCER1Q8TC90 406 aaPredicted RBP28.86■■■□□ 2.21
ARPC1B-205ENST00000427217 UBAP1LF5GYI3 381 aa28.85■■■□□ 2.21
ARPC1B-205ENST00000427217 SIRT1Q96EB6 747 aa28.85■■■□□ 2.21
ARPC1B-205ENST00000427217 STK26Q9P289 416 aa28.83■■■□□ 2.21
ARPC1B-205ENST00000427217 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
ARPC1B-205ENST00000427217 C19orf44Q9H6X5 657 aa28.82■■■□□ 2.2
ARPC1B-205ENST00000427217 C14orf37Q86TY3 774 aa28.81■■■□□ 2.2
ARPC1B-205ENST00000427217 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
ARPC1B-205ENST00000427217 ADGRB2O60241 1585 aa28.78■■■□□ 2.2
ARPC1B-205ENST00000427217 RALGAPBQ86X10 1494 aa28.78■■■□□ 2.2
ARPC1B-205ENST00000427217 ROBO1Q9Y6N7 1651 aa28.77■■■□□ 2.2
ARPC1B-205ENST00000427217 CADPS2Q86UW7 1296 aa28.76■■■□□ 2.19
ARPC1B-205ENST00000427217 PLEKHH1Q9ULM0 1364 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms