RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SYNJ2O15056 1496 aa24.44■■□□□ 1.5
HCG18-235ENST00000426882 ARHGAP5Q13017 1502 aa24.44■■□□□ 1.5
HCG18-235ENST00000426882 KIAA2012Q0VF49 1180 aa24.44■■□□□ 1.5
HCG18-235ENST00000426882 GSE1Q14687 1217 aa24.44■■□□□ 1.5
HCG18-235ENST00000426882 GGNBP2Q9H3C7 697 aa24.43■■□□□ 1.5
HCG18-235ENST00000426882 DDX11L8A8MPP1 907 aa24.43■■□□□ 1.5
HCG18-235ENST00000426882 C9orf84Q5VXU9 1444 aa24.43■■□□□ 1.5
HCG18-235ENST00000426882 GORABQ5T7V8 394 aa24.43■■□□□ 1.5
HCG18-235ENST00000426882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.42■■□□□ 1.5
HCG18-235ENST00000426882 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
HCG18-235ENST00000426882 PPP2R1AP30153 589 aa24.42■■□□□ 1.5
HCG18-235ENST00000426882 PANK1Q8TE04 598 aa24.42■■□□□ 1.5
HCG18-235ENST00000426882 HTATSF1O43719 755 aaKnown RBP24.41■■□□□ 1.5
HCG18-235ENST00000426882 RILPL2Q969X0 211 aa24.41■■□□□ 1.5
HCG18-235ENST00000426882 CCDC184Q52MB2 194 aa24.4■■□□□ 1.5
HCG18-235ENST00000426882 API5Q9BZZ5 524 aaKnown RBP24.4■■□□□ 1.5
HCG18-235ENST00000426882 FOXD4L5Q5VV16 416 aaPredicted RBP24.4■■□□□ 1.5
HCG18-235ENST00000426882 FOXD4L4Q8WXT5 416 aaPredicted RBP24.4■■□□□ 1.5
HCG18-235ENST00000426882 CABP2Q9NPB3 220 aa24.4■■□□□ 1.5
HCG18-235ENST00000426882 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.5
HCG18-235ENST00000426882 NAIPQ13075 1403 aa24.39■■□□□ 1.5
HCG18-235ENST00000426882 TULP1O00294 542 aaPredicted RBP24.39■■□□□ 1.49
HCG18-235ENST00000426882 MTHFSP49914 203 aa24.39■■□□□ 1.49
HCG18-235ENST00000426882 KIF16BQ96L93 1317 aa24.37■■□□□ 1.49
HCG18-235ENST00000426882 DAPK1P53355 1430 aa24.37■■□□□ 1.49
HCG18-235ENST00000426882 TCP11L2Q8N4U5 519 aa24.36■■□□□ 1.49
HCG18-235ENST00000426882 TAF7LQ5H9L4 462 aa24.36■■□□□ 1.49
HCG18-235ENST00000426882 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
HCG18-235ENST00000426882 HMOX1P09601 288 aa24.35■■□□□ 1.49
HCG18-235ENST00000426882 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
HCG18-235ENST00000426882 DDX49Q9Y6V7 483 aaKnown RBP24.34■■□□□ 1.49
HCG18-235ENST00000426882 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
HCG18-235ENST00000426882 TEFQ10587 303 aa24.34■■□□□ 1.49
HCG18-235ENST00000426882 HECW1Q76N89 1606 aa24.33■■□□□ 1.49
HCG18-235ENST00000426882 GNAI1P63096 354 aa24.33■■□□□ 1.49
HCG18-235ENST00000426882 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.33■■□□□ 1.49
HCG18-235ENST00000426882 IFT140Q96RY7 1462 aa24.33■■□□□ 1.48
HCG18-235ENST00000426882 LNPKQ9C0E8 428 aa24.32■■□□□ 1.48
HCG18-235ENST00000426882 AAMPQ13685 434 aa24.32■■□□□ 1.48
HCG18-235ENST00000426882 CSPP1Q1MSJ5 1256 aa24.32■■□□□ 1.48
HCG18-235ENST00000426882 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
HCG18-235ENST00000426882 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
HCG18-235ENST00000426882 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
HCG18-235ENST00000426882 SUPT6HQ7KZ85 1726 aaKnown RBP24.29■■□□□ 1.48
HCG18-235ENST00000426882 REC8O95072 547 aa24.29■■□□□ 1.48
HCG18-235ENST00000426882 EIF2S2P20042 333 aaKnown RBP24.29■■□□□ 1.48
HCG18-235ENST00000426882 NECTIN2Q92692 538 aa24.29■■□□□ 1.48
HCG18-235ENST00000426882 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.28■■□□□ 1.48
HCG18-235ENST00000426882 CHMP5Q9NZZ3 219 aa24.28■■□□□ 1.48
HCG18-235ENST00000426882 EPRSP07814 1512 aaKnown RBP24.27■■□□□ 1.48
HCG18-235ENST00000426882 SKOR2Q2VWA4 1001 aaPredicted RBP24.27■■□□□ 1.48
HCG18-235ENST00000426882 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
HCG18-235ENST00000426882 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
HCG18-235ENST00000426882 PHF14O94880 888 aa24.26■■□□□ 1.47
HCG18-235ENST00000426882 FKBP5Q13451 457 aaPredicted RBP24.26■■□□□ 1.47
HCG18-235ENST00000426882 SLC12A5Q9H2X9 1139 aa24.26■■□□□ 1.47
HCG18-235ENST00000426882 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
HCG18-235ENST00000426882 ABCA10Q8WWZ4 1543 aa24.25■■□□□ 1.47
HCG18-235ENST00000426882 PCF11O94913 1555 aaKnown RBP24.25■■□□□ 1.47
HCG18-235ENST00000426882 ROCK1Q13464 1354 aa24.25■■□□□ 1.47
HCG18-235ENST00000426882 C22orf23Q9BZE7 217 aa24.25■■□□□ 1.47
HCG18-235ENST00000426882 FOXD4L6Q3SYB3 417 aaPredicted RBP24.24■■□□□ 1.47
HCG18-235ENST00000426882 FOXD4L3Q6VB84 417 aaPredicted RBP24.24■■□□□ 1.47
HCG18-235ENST00000426882 ISY1Q9ULR0 285 aaKnown RBP24.23■■□□□ 1.47
HCG18-235ENST00000426882 DIAPH3Q9NSV4 1193 aa24.23■■□□□ 1.47
HCG18-235ENST00000426882 C9orf78Q9NZ63 289 aaPredicted RBP24.22■■□□□ 1.47
HCG18-235ENST00000426882 SMG6Q86US8 1419 aaKnown RBP24.22■■□□□ 1.47
HCG18-235ENST00000426882 TSPYL4Q9UJ04 414 aa24.21■■□□□ 1.47
HCG18-235ENST00000426882 PLEKHH2Q8IVE3 1493 aa24.21■■□□□ 1.47
HCG18-235ENST00000426882 NFKBIBQ15653 356 aa24.21■■□□□ 1.47
HCG18-235ENST00000426882 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.47
HCG18-235ENST00000426882 ERBINQ96RT1 1412 aa24.2■■□□□ 1.46
HCG18-235ENST00000426882 KIF3AQ9Y496 699 aa24.2■■□□□ 1.46
HCG18-235ENST00000426882 BCAR3O75815 825 aa24.19■■□□□ 1.46
HCG18-235ENST00000426882 EXOSC9Q06265 439 aaKnown RBP24.19■■□□□ 1.46
HCG18-235ENST00000426882 PDE3AQ14432 1141 aa24.19■■□□□ 1.46
HCG18-235ENST00000426882 NEXNQ0ZGT2 675 aa24.19■■□□□ 1.46
HCG18-235ENST00000426882 ARID3AQ99856 593 aa24.19■■□□□ 1.46
HCG18-235ENST00000426882 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
HCG18-235ENST00000426882 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
HCG18-235ENST00000426882 ATP6V1DQ9Y5K8 247 aa24.18■■□□□ 1.46
HCG18-235ENST00000426882 SCAPERQ9BY12 1400 aa24.18■■□□□ 1.46
HCG18-235ENST00000426882 ANO2Q9NQ90 1003 aa24.18■■□□□ 1.46
HCG18-235ENST00000426882 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
HCG18-235ENST00000426882 PRKAR2BP31323 418 aa24.17■■□□□ 1.46
HCG18-235ENST00000426882 INTS3Q68E01 1043 aaKnown RBP24.17■■□□□ 1.46
HCG18-235ENST00000426882 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
HCG18-235ENST00000426882 TPM4P67936 248 aa24.16■■□□□ 1.46
HCG18-235ENST00000426882 RUFY2Q8WXA3 655 aa24.16■■□□□ 1.46
HCG18-235ENST00000426882 MAP3K1Q13233 1512 aa24.16■■□□□ 1.46
HCG18-235ENST00000426882 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
HCG18-235ENST00000426882 PDZRN3Q9UPQ7 1066 aa24.15■■□□□ 1.46
HCG18-235ENST00000426882 PSME1Q06323 249 aa24.14■■□□□ 1.45
HCG18-235ENST00000426882 TOMM22Q9NS69 142 aa24.14■■□□□ 1.45
HCG18-235ENST00000426882 SF3A1Q15459 793 aaKnown RBP24.13■■□□□ 1.45
HCG18-235ENST00000426882 IFIT2P09913 472 aaKnown RBP24.13■■□□□ 1.45
HCG18-235ENST00000426882 TTC5Q8N0Z6 440 aa24.13■■□□□ 1.45
HCG18-235ENST00000426882 TSR2Q969E8 191 aaKnown RBP24.13■■□□□ 1.45
HCG18-235ENST00000426882 H3BQV1 296 aa24.13■■□□□ 1.45
HCG18-235ENST00000426882 ZKSCAN1P17029 563 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms