RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 MYO5BQ9ULV0 1848 aa30.61■■■□□ 2.49
CCDC107-206ENST00000426546 RRBP1Q9P2E9 1410 aaKnown RBP30.58■■■□□ 2.49
CCDC107-206ENST00000426546 TMEM94Q12767 1356 aa30.58■■■□□ 2.49
CCDC107-206ENST00000426546 FAM135BQ49AJ0 1406 aa30.57■■■□□ 2.48
CCDC107-206ENST00000426546 KCNA6P17658 529 aa30.57■■■□□ 2.48
CCDC107-206ENST00000426546 TMEM131LA2VDJ0 1609 aa30.57■■■□□ 2.48
CCDC107-206ENST00000426546 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
CCDC107-206ENST00000426546 NUP155O75694 1391 aa30.54■■■□□ 2.48
CCDC107-206ENST00000426546 RGS17Q9UGC6 210 aaPredicted RBP30.54■■■□□ 2.48
CCDC107-206ENST00000426546 ZFYVE9O95405 1425 aa30.54■■■□□ 2.48
CCDC107-206ENST00000426546 NWD1Q149M9 1564 aa30.49■■■□□ 2.47
CCDC107-206ENST00000426546 PROSER2Q86WR7 435 aaPredicted RBP30.49■■■□□ 2.47
CCDC107-206ENST00000426546 RBM33Q96EV2 1170 aaKnown RBP30.49■■■□□ 2.47
CCDC107-206ENST00000426546 NKTRP30414 1462 aaKnown RBP30.48■■■□□ 2.47
CCDC107-206ENST00000426546 RIMS2Q9UQ26 1411 aa30.47■■■□□ 2.47
CCDC107-206ENST00000426546 ROBO1Q9Y6N7 1651 aa30.47■■■□□ 2.47
CCDC107-206ENST00000426546 PLEKHG1Q9ULL1 1385 aa30.46■■■□□ 2.47
CCDC107-206ENST00000426546 HDGFP51858 240 aaKnown RBP30.46■■■□□ 2.47
CCDC107-206ENST00000426546 SPHKAPQ2M3C7 1700 aa30.43■■■□□ 2.46
CCDC107-206ENST00000426546 PPP1R15AO75807 674 aaPredicted RBP30.4■■■□□ 2.46
CCDC107-206ENST00000426546 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.4■■■□□ 2.46
CCDC107-206ENST00000426546 BCANQ96GW7 911 aa30.4■■■□□ 2.46
CCDC107-206ENST00000426546 NAIPQ13075 1403 aa30.39■■■□□ 2.46
CCDC107-206ENST00000426546 CHGAP10645 457 aaKnown RBP30.39■■■□□ 2.46
CCDC107-206ENST00000426546 CHD2O14647 1828 aaKnown RBP30.38■■■□□ 2.45
CCDC107-206ENST00000426546 MSH6P52701 1360 aa30.37■■■□□ 2.45
CCDC107-206ENST00000426546 DIP2AQ14689 1571 aa30.35■■■□□ 2.45
CCDC107-206ENST00000426546 POTEAQ6S8J7 498 aa30.33■■■□□ 2.45
CCDC107-206ENST00000426546 HFM1A2PYH4 1435 aa30.32■■■□□ 2.44
CCDC107-206ENST00000426546 SLAIN2Q9P270 581 aa30.32■■■□□ 2.44
CCDC107-206ENST00000426546 TBX22Q9Y458 520 aa30.31■■■□□ 2.44
CCDC107-206ENST00000426546 ADAMTS13Q76LX8 1427 aa30.29■■■□□ 2.44
CCDC107-206ENST00000426546 PHLPP1O60346 1717 aa30.28■■■□□ 2.44
CCDC107-206ENST00000426546 TRPM2O94759 1503 aa30.27■■■□□ 2.44
CCDC107-206ENST00000426546 NUTM2DQ5VT03 806 aaPredicted RBP30.25■■■□□ 2.43
CCDC107-206ENST00000426546 PIK3R4Q99570 1358 aa30.25■■■□□ 2.43
CCDC107-206ENST00000426546 CLTCL1P53675 1640 aa30.25■■■□□ 2.43
CCDC107-206ENST00000426546 NCOA3Q9Y6Q9 1424 aa30.23■■■□□ 2.43
CCDC107-206ENST00000426546 JCADQ9P266 1359 aa30.22■■■□□ 2.43
CCDC107-206ENST00000426546 SETBP1Q9Y6X0 1596 aa30.2■■■□□ 2.43
CCDC107-206ENST00000426546 KIF1BO60333 1816 aa30.2■■■□□ 2.43
CCDC107-206ENST00000426546 COL16A1Q07092 1604 aaPredicted RBP30.2■■■□□ 2.43
CCDC107-206ENST00000426546 NRXN3Q9Y4C0 1643 aa30.19■■■□□ 2.42
CCDC107-206ENST00000426546 ZNF326Q5BKZ1 582 aaKnown RBP30.15■■■□□ 2.42
CCDC107-206ENST00000426546 C14orf37Q86TY3 774 aa30.15■■■□□ 2.42
CCDC107-206ENST00000426546 TRIM52Q96A61 297 aa30.15■■■□□ 2.42
CCDC107-206ENST00000426546 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.15■■■□□ 2.42
CCDC107-206ENST00000426546 NEXMIFQ5QGS0 1516 aa30.15■■■□□ 2.42
CCDC107-206ENST00000426546 C19orf44Q9H6X5 657 aa30.12■■■□□ 2.41
CCDC107-206ENST00000426546 XRN1Q8IZH2 1706 aaKnown RBP30.11■■■□□ 2.41
CCDC107-206ENST00000426546 CADPS2Q86UW7 1296 aa30.11■■■□□ 2.41
CCDC107-206ENST00000426546 PTPRUQ92729 1446 aa30.11■■■□□ 2.41
CCDC107-206ENST00000426546 LRP6O75581 1613 aa30.1■■■□□ 2.41
CCDC107-206ENST00000426546 SETD1AO15047 1707 aaKnown RBP30.09■■■□□ 2.41
CCDC107-206ENST00000426546 AHDC1Q5TGY3 1603 aaPredicted RBP30.09■■■□□ 2.41
CCDC107-206ENST00000426546 SLC4A1APQ9BWU0 796 aaKnown RBP30.09■■■□□ 2.41
CCDC107-206ENST00000426546 ATF3P18847 181 aa30.08■■■□□ 2.41
CCDC107-206ENST00000426546 AMOTL2Q9Y2J4 779 aa30.08■■■□□ 2.41
CCDC107-206ENST00000426546 SPATA31A6Q5VVP1 1343 aa30.07■■■□□ 2.4
CCDC107-206ENST00000426546 SHPRHQ149N8 1683 aa30.03■■■□□ 2.4
CCDC107-206ENST00000426546 METP08581 1390 aa30.02■■■□□ 2.4
CCDC107-206ENST00000426546 BRINP3Q76B58 766 aa30■■■□□ 2.39
CCDC107-206ENST00000426546 DCCP43146 1447 aa29.99■■■□□ 2.39
CCDC107-206ENST00000426546 PPLO60437 1756 aa29.98■■■□□ 2.39
CCDC107-206ENST00000426546 MEX3CQ5U5Q3 659 aaKnown RBP29.98■■■□□ 2.39
CCDC107-206ENST00000426546 RPGRIP1LQ68CZ1 1315 aa29.96■■■□□ 2.39
CCDC107-206ENST00000426546 VGFO15240 615 aaPredicted RBP29.96■■■□□ 2.39
CCDC107-206ENST00000426546 ZNF772Q68DY9 489 aaPredicted RBP29.95■■■□□ 2.39
CCDC107-206ENST00000426546 ASXL1Q8IXJ9 1541 aa29.93■■■□□ 2.38
CCDC107-206ENST00000426546 MST1RQ04912 1400 aa29.91■■■□□ 2.38
CCDC107-206ENST00000426546 ACIN1Q9UKV3 1341 aaKnown RBP29.91■■■□□ 2.38
CCDC107-206ENST00000426546 CCDC144AA2RUR9 1427 aa29.9■■■□□ 2.38
CCDC107-206ENST00000426546 FOXD1Q16676 465 aa29.9■■■□□ 2.38
CCDC107-206ENST00000426546 NALCNQ8IZF0 1738 aa29.88■■■□□ 2.37
CCDC107-206ENST00000426546 MPHOSPH9Q99550 1183 aa29.88■■■□□ 2.37
CCDC107-206ENST00000426546 SETD5Q9C0A6 1442 aa29.88■■■□□ 2.37
CCDC107-206ENST00000426546 ADGRL3Q9HAR2 1447 aa29.88■■■□□ 2.37
CCDC107-206ENST00000426546 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
CCDC107-206ENST00000426546 PTCH1Q13635 1447 aa29.87■■■□□ 2.37
CCDC107-206ENST00000426546 NUTM2BA6NNL0 878 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-206ENST00000426546 NUTM2EB1AL46 878 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-206ENST00000426546 NUTM2AQ8IVF1 878 aaPredicted RBP29.86■■■□□ 2.37
CCDC107-206ENST00000426546 PRAG1Q86YV5 1406 aa29.86■■■□□ 2.37
CCDC107-206ENST00000426546 IFT172Q9UG01 1749 aa29.84■■■□□ 2.37
CCDC107-206ENST00000426546 SPATA31E1Q6ZUB1 1445 aa29.83■■■□□ 2.37
CCDC107-206ENST00000426546 UPF1Q92900 1129 aaKnown RBP eCLIP29.83■■■□□ 2.37
CCDC107-206ENST00000426546 RXRBP28702 533 aa29.81■■■□□ 2.36
CCDC107-206ENST00000426546 LRRC59Q96AG4 307 aaKnown RBP29.79■■■□□ 2.36
CCDC107-206ENST00000426546 AFF2P51816 1311 aa29.78■■■□□ 2.36
CCDC107-206ENST00000426546 DDX17Q92841 729 aaKnown RBP29.78■■■□□ 2.36
CCDC107-206ENST00000426546 ANKRD30BQ9BXX2 1392 aa29.77■■■□□ 2.36
CCDC107-206ENST00000426546 ROBO2Q9HCK4 1378 aa29.77■■■□□ 2.36
CCDC107-206ENST00000426546 CDK12Q9NYV4 1490 aaPredicted RBP29.77■■■□□ 2.36
CCDC107-206ENST00000426546 PNPLA6Q8IY17 1366 aa29.75■■■□□ 2.35
CCDC107-206ENST00000426546 RGL3Q3MIN7 710 aa29.73■■■□□ 2.35
CCDC107-206ENST00000426546 ADGRF5Q8IZF2 1346 aa29.72■■■□□ 2.35
CCDC107-206ENST00000426546 RAB3GAP2Q9H2M9 1393 aa29.72■■■□□ 2.35
CCDC107-206ENST00000426546 C1orf167Q5SNV9 1468 aa29.71■■■□□ 2.35
CCDC107-206ENST00000426546 C8orf37Q96NL8 207 aa29.69■■■□□ 2.34
CCDC107-206ENST00000426546 PIK3C2GO75747 1445 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms