RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 ASTLQ6HA08 431 aaPredicted RBP10.15□□□□□ -0.78
NIF3L1-207ENST00000426253 PTPRKQ15262 1439 aa10.15□□□□□ -0.79
NIF3L1-207ENST00000426253 SUPT6HQ7KZ85 1726 aaKnown RBP10.14□□□□□ -0.79
NIF3L1-207ENST00000426253 DPY19L2Q6NUT2 758 aa10.14□□□□□ -0.79
NIF3L1-207ENST00000426253 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
NIF3L1-207ENST00000426253 CPS1P31327 1500 aa10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 SEMA3EO15041 775 aa10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 RANGAP1P46060 587 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 IRX5P78411 483 aaPredicted RBP10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 PDCD7Q8N8D1 485 aaKnown RBP10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
NIF3L1-207ENST00000426253 PPP1R15BQ5SWA1 713 aa10.11□□□□□ -0.79
NIF3L1-207ENST00000426253 SMYD5Q6GMV2 418 aa10.11□□□□□ -0.79
NIF3L1-207ENST00000426253 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
NIF3L1-207ENST00000426253 CTTNBP2Q8WZ74 1663 aa10.1□□□□□ -0.79
NIF3L1-207ENST00000426253 TMEM121BQ9BXQ6 578 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-207ENST00000426253 MYT1LQ9UL68 1186 aa10.1□□□□□ -0.79
NIF3L1-207ENST00000426253 ALKQ9UM73 1620 aa10.09□□□□□ -0.79
NIF3L1-207ENST00000426253 UBTFP17480 764 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-207ENST00000426253 PLA2R1Q13018 1463 aa10.09□□□□□ -0.79
NIF3L1-207ENST00000426253 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
NIF3L1-207ENST00000426253 TCOF1Q13428 1488 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-207ENST00000426253 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
NIF3L1-207ENST00000426253 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
NIF3L1-207ENST00000426253 GABBR2O75899 941 aa10.06□□□□□ -0.8
NIF3L1-207ENST00000426253 FOXK1P85037 733 aa10.06□□□□□ -0.8
NIF3L1-207ENST00000426253 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
NIF3L1-207ENST00000426253 BOLA1Q9Y3E2 137 aa10.06□□□□□ -0.8
NIF3L1-207ENST00000426253 DSG2Q14126 1118 aa10.05□□□□□ -0.8
NIF3L1-207ENST00000426253 MYO3AQ8NEV4 1616 aa10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 ZNF142P52746 1687 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 G3V3G9 751 aa10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 ZC3H15Q8WU90 426 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 L3MBTL3Q96JM7 780 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 NPATQ14207 1427 aa10.04□□□□□ -0.8
NIF3L1-207ENST00000426253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.03□□□□□ -0.8
NIF3L1-207ENST00000426253 PLCG2P16885 1265 aa10.03□□□□□ -0.8
NIF3L1-207ENST00000426253 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
NIF3L1-207ENST00000426253 CEP170BQ9Y4F5 1589 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-207ENST00000426253 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
NIF3L1-207ENST00000426253 RAPGEF6Q8TEU7 1601 aa10.01□□□□□ -0.81
NIF3L1-207ENST00000426253 RNF17Q9BXT8 1623 aaKnown RBP10.01□□□□□ -0.81
NIF3L1-207ENST00000426253 PLEKHD1A6NEE1 506 aa10.01□□□□□ -0.81
NIF3L1-207ENST00000426253 KIF3CO14782 793 aa10.01□□□□□ -0.81
NIF3L1-207ENST00000426253 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
NIF3L1-207ENST00000426253 POLR1AO95602 1720 aaPredicted RBP10□□□□□ -0.81
NIF3L1-207ENST00000426253 DCBLD2Q96PD2 775 aa10□□□□□ -0.81
NIF3L1-207ENST00000426253 AGLP35573 1532 aa10□□□□□ -0.81
NIF3L1-207ENST00000426253 DIP2CQ9Y2E4 1556 aa10□□□□□ -0.81
NIF3L1-207ENST00000426253 PLPP6Q8IY26 295 aa9.99□□□□□ -0.81
NIF3L1-207ENST00000426253 SAMD9Q5K651 1589 aa9.99□□□□□ -0.81
NIF3L1-207ENST00000426253 MROH2AA6NES4 1674 aa9.99□□□□□ -0.81
NIF3L1-207ENST00000426253 REREQ9P2R6 1566 aa9.98□□□□□ -0.81
NIF3L1-207ENST00000426253 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
NIF3L1-207ENST00000426253 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
NIF3L1-207ENST00000426253 ZNF518AQ6AHZ1 1483 aa9.98□□□□□ -0.81
NIF3L1-207ENST00000426253 VWDEQ8N2E2 1590 aa9.97□□□□□ -0.81
NIF3L1-207ENST00000426253 DPYSL4O14531 572 aa9.97□□□□□ -0.81
NIF3L1-207ENST00000426253 PDIA6Q15084 440 aa9.97□□□□□ -0.81
NIF3L1-207ENST00000426253 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
NIF3L1-207ENST00000426253 ZMYM3Q14202 1370 aa9.97□□□□□ -0.81
NIF3L1-207ENST00000426253 LRRC7Q96NW7 1537 aa9.97□□□□□ -0.81
NIF3L1-207ENST00000426253 ABCA6Q8N139 1617 aa9.96□□□□□ -0.81
NIF3L1-207ENST00000426253 ZMYND10O75800 440 aa9.96□□□□□ -0.82
NIF3L1-207ENST00000426253 SEC24BO95487 1268 aa9.96□□□□□ -0.82
NIF3L1-207ENST00000426253 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
NIF3L1-207ENST00000426253 NEURL4Q96JN8 1562 aa9.96□□□□□ -0.82
NIF3L1-207ENST00000426253 MLLT3P42568 568 aaPredicted RBP9.95□□□□□ -0.82
NIF3L1-207ENST00000426253 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
NIF3L1-207ENST00000426253 AFAP1Q8N556 730 aa9.95□□□□□ -0.82
NIF3L1-207ENST00000426253 NUP153P49790 1475 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-207ENST00000426253 C7P10643 843 aa9.94□□□□□ -0.82
NIF3L1-207ENST00000426253 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
NIF3L1-207ENST00000426253 COLQQ9Y215 455 aaPredicted RBP9.94□□□□□ -0.82
NIF3L1-207ENST00000426253 KDM5CP41229 1560 aa9.93□□□□□ -0.82
NIF3L1-207ENST00000426253 PLCH2O75038 1416 aa9.93□□□□□ -0.82
NIF3L1-207ENST00000426253 EFCAB2Q5VUJ9 269 aa9.93□□□□□ -0.82
NIF3L1-207ENST00000426253 CLTCQ00610 1675 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-207ENST00000426253 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-207ENST00000426253 SYNMO15061 1565 aa9.92□□□□□ -0.82
NIF3L1-207ENST00000426253 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
NIF3L1-207ENST00000426253 POTEHQ6S545 545 aa9.92□□□□□ -0.82
NIF3L1-207ENST00000426253 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
NIF3L1-207ENST00000426253 ARHGAP35Q9NRY4 1499 aa9.91□□□□□ -0.82
NIF3L1-207ENST00000426253 MAP3K9P80192 1104 aa9.91□□□□□ -0.82
NIF3L1-207ENST00000426253 MEX3CQ5U5Q3 659 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-207ENST00000426253 ZNF772Q68DY9 489 aaPredicted RBP9.91□□□□□ -0.82
NIF3L1-207ENST00000426253 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
NIF3L1-207ENST00000426253 A2ML1A8K2U0 1454 aa9.91□□□□□ -0.82
NIF3L1-207ENST00000426253 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 RXRBP28702 533 aa9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 RBM26Q5T8P6 1007 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 SLC24A3Q9HC58 644 aa9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 STRCP1A6NGW2 1772 aa9.9□□□□□ -0.82
NIF3L1-207ENST00000426253 FMN1Q68DA7 1419 aa9.9□□□□□ -0.83
NIF3L1-207ENST00000426253 POTEFA5A3E0 1075 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms