RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 STAC3Q96MF2 364 aa34.91■■■■□ 3.18
APOE-202ENST00000425718 PPLO60437 1756 aa34.91■■■■□ 3.18
APOE-202ENST00000425718 SCAF11Q99590 1463 aaKnown RBP34.9■■■■□ 3.18
APOE-202ENST00000425718 HSPA2P54652 639 aa34.89■■■■□ 3.18
APOE-202ENST00000425718 ZFYVE9O95405 1425 aa34.89■■■■□ 3.18
APOE-202ENST00000425718 IFT172Q9UG01 1749 aa34.88■■■■□ 3.17
APOE-202ENST00000425718 NEXMIFQ5QGS0 1516 aa34.87■■■■□ 3.17
APOE-202ENST00000425718 RGL3Q3MIN7 710 aa34.86■■■■□ 3.17
APOE-202ENST00000425718 TXNDC2Q86VQ3 553 aa34.85■■■■□ 3.17
APOE-202ENST00000425718 VGFO15240 615 aaPredicted RBP34.84■■■■□ 3.17
APOE-202ENST00000425718 PPP1R15AO75807 674 aaPredicted RBP34.84■■■■□ 3.17
APOE-202ENST00000425718 SIN3AQ96ST3 1273 aa34.84■■■■□ 3.17
APOE-202ENST00000425718 STRCQ7RTU9 1775 aa34.83■■■■□ 3.17
APOE-202ENST00000425718 NEUROD1Q13562 356 aa34.83■■■■□ 3.17
APOE-202ENST00000425718 DMRT2Q9Y5R5 561 aa34.81■■■■□ 3.16
APOE-202ENST00000425718 MED14O60244 1454 aa34.81■■■■□ 3.16
APOE-202ENST00000425718 TONSLQ96HA7 1378 aa34.78■■■■□ 3.16
APOE-202ENST00000425718 MYOM2P54296 1465 aa34.78■■■■□ 3.16
APOE-202ENST00000425718 IQGAP1P46940 1657 aa34.77■■■■□ 3.16
APOE-202ENST00000425718 TIMELESSQ9UNS1 1208 aa34.77■■■■□ 3.16
APOE-202ENST00000425718 PLEKHG1Q9ULL1 1385 aa34.76■■■■□ 3.16
APOE-202ENST00000425718 LTKP29376 864 aa34.75■■■■□ 3.15
APOE-202ENST00000425718 NPHP4O75161 1426 aaPredicted RBP34.74■■■■□ 3.15
APOE-202ENST00000425718 NCKAP5LQ9HCH0 1330 aa34.73■■■■□ 3.15
APOE-202ENST00000425718 DCAF11Q8TEB1 546 aa34.7■■■■□ 3.15
APOE-202ENST00000425718 DIP2AQ14689 1571 aa34.69■■■■□ 3.14
APOE-202ENST00000425718 SETBP1Q9Y6X0 1596 aa34.69■■■■□ 3.14
APOE-202ENST00000425718 BCANQ96GW7 911 aa34.66■■■■□ 3.14
APOE-202ENST00000425718 NUTM2DQ5VT03 806 aaPredicted RBP34.65■■■■□ 3.14
APOE-202ENST00000425718 L3MBTL2Q969R5 705 aa34.65■■■■□ 3.14
APOE-202ENST00000425718 NRXN1Q9ULB1 1477 aa34.65■■■■□ 3.14
APOE-202ENST00000425718 LAMC1P11047 1609 aa34.64■■■■□ 3.14
APOE-202ENST00000425718 KDM2AQ9Y2K7 1162 aa34.61■■■■□ 3.13
APOE-202ENST00000425718 PIK3C2GO75747 1445 aa34.61■■■■□ 3.13
APOE-202ENST00000425718 ADGRF5Q8IZF2 1346 aa34.58■■■■□ 3.13
APOE-202ENST00000425718 NRXN3Q9Y4C0 1643 aa34.58■■■■□ 3.13
APOE-202ENST00000425718 TBX22Q9Y458 520 aa34.57■■■■□ 3.12
APOE-202ENST00000425718 KIAA1210Q9ULL0 1709 aa34.57■■■■□ 3.12
APOE-202ENST00000425718 PIK3R4Q99570 1358 aa34.54■■■■□ 3.12
APOE-202ENST00000425718 ALKQ9UM73 1620 aa34.54■■■■□ 3.12
APOE-202ENST00000425718 ADAMTS13Q76LX8 1427 aa34.54■■■■□ 3.12
APOE-202ENST00000425718 PRAG1Q86YV5 1406 aa34.53■■■■□ 3.12
APOE-202ENST00000425718 SETD1AO15047 1707 aaKnown RBP34.5■■■■□ 3.11
APOE-202ENST00000425718 SLC26A8Q96RN1 970 aa34.48■■■■□ 3.11
APOE-202ENST00000425718 C14orf93Q9H972 538 aaKnown RBP34.48■■■■□ 3.11
APOE-202ENST00000425718 CHD2O14647 1828 aaKnown RBP34.47■■■■□ 3.11
APOE-202ENST00000425718 TRPM1Q7Z4N2 1603 aa34.41■■■■□ 3.1
APOE-202ENST00000425718 SENP3Q9H4L4 574 aaPredicted RBP34.39■■■■□ 3.1
APOE-202ENST00000425718 NWD1Q149M9 1564 aa34.38■■■■□ 3.09
APOE-202ENST00000425718 CFAP70Q5T0N1 1121 aa34.38■■■■□ 3.09
APOE-202ENST00000425718 KCNA6P17658 529 aa34.36■■■■□ 3.09
APOE-202ENST00000425718 METP08581 1390 aa34.34■■■■□ 3.09
APOE-202ENST00000425718 NKTRP30414 1462 aaKnown RBP34.33■■■■□ 3.09
APOE-202ENST00000425718 KNDC1Q76NI1 1749 aa34.33■■■■□ 3.09
APOE-202ENST00000425718 CPS1P31327 1500 aa34.33■■■■□ 3.09
APOE-202ENST00000425718 RALGAPBQ86X10 1494 aa34.33■■■■□ 3.09
APOE-202ENST00000425718 XRN1Q8IZH2 1706 aaKnown RBP34.33■■■■□ 3.09
APOE-202ENST00000425718 ADGRB1O14514 1584 aa34.31■■■■□ 3.08
APOE-202ENST00000425718 ZEB1P37275 1124 aaPredicted RBP34.3■■■■□ 3.08
APOE-202ENST00000425718 LRPPRCP42704 1394 aaKnown RBP34.3■■■■□ 3.08
APOE-202ENST00000425718 ASXL1Q8IXJ9 1541 aa34.3■■■■□ 3.08
APOE-202ENST00000425718 ROCK2O75116 1388 aaKnown RBP34.29■■■■□ 3.08
APOE-202ENST00000425718 NBPF8Q3BBV2 869 aa34.29■■■■□ 3.08
APOE-202ENST00000425718 YTHDC2Q9H6S0 1430 aaKnown RBP34.29■■■■□ 3.08
APOE-202ENST00000425718 AMOTL2Q9Y2J4 779 aa34.28■■■■□ 3.08
APOE-202ENST00000425718 ABCC11Q96J66 1382 aa34.27■■■■□ 3.08
APOE-202ENST00000425718 STRCP1A6NGW2 1772 aa34.26■■■■□ 3.08
APOE-202ENST00000425718 ZNF335Q9H4Z2 1342 aaPredicted RBP34.26■■■■□ 3.07
APOE-202ENST00000425718 TECPR2O15040 1411 aa34.25■■■■□ 3.07
APOE-202ENST00000425718 PTCH1Q13635 1447 aa34.25■■■■□ 3.07
APOE-202ENST00000425718 PTPRUQ92729 1446 aa34.25■■■■□ 3.07
APOE-202ENST00000425718 GPRASP1Q5JY77 1395 aa34.24■■■■□ 3.07
APOE-202ENST00000425718 TMEM132EQ6IEE7 984 aa34.24■■■■□ 3.07
APOE-202ENST00000425718 DLC1Q96QB1 1528 aa34.23■■■■□ 3.07
APOE-202ENST00000425718 SIRT1Q96EB6 747 aa34.22■■■■□ 3.07
APOE-202ENST00000425718 LTBP4Q8N2S1 1624 aa34.2■■■■□ 3.07
APOE-202ENST00000425718 NBPF1Q3BBV0 1214 aa34.19■■■■□ 3.06
APOE-202ENST00000425718 FAM135BQ49AJ0 1406 aa34.18■■■■□ 3.06
APOE-202ENST00000425718 NCOA3Q9Y6Q9 1424 aa34.18■■■■□ 3.06
APOE-202ENST00000425718 EIF3AQ14152 1382 aaKnown RBP34.17■■■■□ 3.06
APOE-202ENST00000425718 CARD11Q9BXL7 1154 aa34.16■■■■□ 3.06
APOE-202ENST00000425718 STK26Q9P289 416 aa34.16■■■■□ 3.06
APOE-202ENST00000425718 ARHGEF28Q8N1W1 1705 aaKnown RBP34.16■■■■□ 3.06
APOE-202ENST00000425718 PROSER2Q86WR7 435 aaPredicted RBP34.15■■■■□ 3.06
APOE-202ENST00000425718 LRRC7Q96NW7 1537 aa34.11■■■■□ 3.05
APOE-202ENST00000425718 TRAK1Q9UPV9 953 aa34.11■■■■□ 3.05
APOE-202ENST00000425718 IQSEC2Q5JU85 1478 aa34.1■■■■□ 3.05
APOE-202ENST00000425718 ROBO2Q9HCK4 1378 aa34.09■■■■□ 3.05
APOE-202ENST00000425718 POGKQ9P215 609 aa34.07■■■■□ 3.04
APOE-202ENST00000425718 XIRP1Q702N8 1843 aaKnown RBP34.07■■■■□ 3.04
APOE-202ENST00000425718 TMEM94Q12767 1356 aa34.05■■■■□ 3.04
APOE-202ENST00000425718 PRAM1Q96QH2 718 aa34.02■■■■□ 3.04
APOE-202ENST00000425718 C14orf37Q86TY3 774 aa34.01■■■■□ 3.03
APOE-202ENST00000425718 SLC24A1O60721 1099 aa34■■■■□ 3.03
APOE-202ENST00000425718 CENPJQ9HC77 1338 aaPredicted RBP34■■■■□ 3.03
APOE-202ENST00000425718 MSH6P52701 1360 aa33.99■■■■□ 3.03
APOE-202ENST00000425718 ADGRL3Q9HAR2 1447 aa33.99■■■■□ 3.03
APOE-202ENST00000425718 QRICH2Q9H0J4 1663 aa33.98■■■■□ 3.03
APOE-202ENST00000425718 DCCP43146 1447 aa33.97■■■■□ 3.03
APOE-202ENST00000425718 NALCNQ8IZF0 1738 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms