RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RPRD2Q5VT52 1461 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB3-203ENST00000425319 ATF3P18847 181 aa18.79■□□□□ 0.6
HLA-DQB3-203ENST00000425319 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
HLA-DQB3-203ENST00000425319 CADPS2Q86UW7 1296 aa18.78■□□□□ 0.6
HLA-DQB3-203ENST00000425319 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
HLA-DQB3-203ENST00000425319 RGS17Q9UGC6 210 aaPredicted RBP18.77■□□□□ 0.6
HLA-DQB3-203ENST00000425319 PLEKHG1Q9ULL1 1385 aa18.77■□□□□ 0.6
HLA-DQB3-203ENST00000425319 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB3-203ENST00000425319 NKTRP30414 1462 aaKnown RBP18.76■□□□□ 0.59
HLA-DQB3-203ENST00000425319 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
HLA-DQB3-203ENST00000425319 NCOA3Q9Y6Q9 1424 aa18.75■□□□□ 0.59
HLA-DQB3-203ENST00000425319 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
HLA-DQB3-203ENST00000425319 JCADQ9P266 1359 aa18.75■□□□□ 0.59
HLA-DQB3-203ENST00000425319 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
HLA-DQB3-203ENST00000425319 ADGRL2O95490 1459 aa18.74■□□□□ 0.59
HLA-DQB3-203ENST00000425319 ADGRB3O60242 1522 aa18.73■□□□□ 0.59
HLA-DQB3-203ENST00000425319 TET3O43151 1660 aa18.73■□□□□ 0.59
HLA-DQB3-203ENST00000425319 POTEAQ6S8J7 498 aa18.72■□□□□ 0.59
HLA-DQB3-203ENST00000425319 ZNF772Q68DY9 489 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB3-203ENST00000425319 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
HLA-DQB3-203ENST00000425319 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
HLA-DQB3-203ENST00000425319 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB3-203ENST00000425319 ITGAEP38570 1179 aa18.68■□□□□ 0.58
HLA-DQB3-203ENST00000425319 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB3-203ENST00000425319 AMOTL2Q9Y2J4 779 aa18.68■□□□□ 0.58
HLA-DQB3-203ENST00000425319 NUP155O75694 1391 aa18.68■□□□□ 0.58
HLA-DQB3-203ENST00000425319 ROBO1Q9Y6N7 1651 aa18.65■□□□□ 0.58
HLA-DQB3-203ENST00000425319 ROCK1Q13464 1354 aa18.65■□□□□ 0.58
HLA-DQB3-203ENST00000425319 ZFYVE9O95405 1425 aa18.65■□□□□ 0.58
HLA-DQB3-203ENST00000425319 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
HLA-DQB3-203ENST00000425319 XIRP1Q702N8 1843 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB3-203ENST00000425319 RXRBP28702 533 aa18.6■□□□□ 0.57
HLA-DQB3-203ENST00000425319 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB3-203ENST00000425319 NUTM2BA6NNL0 878 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB3-203ENST00000425319 NUTM2EB1AL46 878 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB3-203ENST00000425319 NUTM2AQ8IVF1 878 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB3-203ENST00000425319 PHLPP1O60346 1717 aa18.57■□□□□ 0.56
HLA-DQB3-203ENST00000425319 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
HLA-DQB3-203ENST00000425319 BRINP3Q76B58 766 aa18.56■□□□□ 0.56
HLA-DQB3-203ENST00000425319 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
HLA-DQB3-203ENST00000425319 DIP2AQ14689 1571 aa18.55■□□□□ 0.56
HLA-DQB3-203ENST00000425319 ADAMTS13Q76LX8 1427 aa18.55■□□□□ 0.56
HLA-DQB3-203ENST00000425319 TRPM2O94759 1503 aa18.54■□□□□ 0.56
HLA-DQB3-203ENST00000425319 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB3-203ENST00000425319 VGFO15240 615 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQB3-203ENST00000425319 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
HLA-DQB3-203ENST00000425319 DCCP43146 1447 aa18.51■□□□□ 0.55
HLA-DQB3-203ENST00000425319 FOXD1Q16676 465 aa18.51■□□□□ 0.55
HLA-DQB3-203ENST00000425319 UNC13BO14795 1591 aa18.51■□□□□ 0.55
HLA-DQB3-203ENST00000425319 UPF1Q92900 1129 aaKnown RBP eCLIP18.48■□□□□ 0.55
HLA-DQB3-203ENST00000425319 NGLY1Q96IV0 654 aa18.48■□□□□ 0.55
HLA-DQB3-203ENST00000425319 PPARGC1BQ86YN6 1023 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB3-203ENST00000425319 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
HLA-DQB3-203ENST00000425319 QTRT2Q9H974 415 aaKnown RBP18.46■□□□□ 0.55
HLA-DQB3-203ENST00000425319 AFF2P51816 1311 aa18.46■□□□□ 0.55
HLA-DQB3-203ENST00000425319 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
HLA-DQB3-203ENST00000425319 E9PCH4 1651 aa18.45■□□□□ 0.54
HLA-DQB3-203ENST00000425319 RBM6P78332 1123 aaKnown RBP18.45■□□□□ 0.54
HLA-DQB3-203ENST00000425319 RPGRIP1LQ68CZ1 1315 aa18.45■□□□□ 0.54
HLA-DQB3-203ENST00000425319 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
HLA-DQB3-203ENST00000425319 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB3-203ENST00000425319 PTPRUQ92729 1446 aa18.44■□□□□ 0.54
HLA-DQB3-203ENST00000425319 COL16A1Q07092 1604 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB3-203ENST00000425319 SETD5Q9C0A6 1442 aa18.43■□□□□ 0.54
HLA-DQB3-203ENST00000425319 MYO5BQ9ULV0 1848 aa18.42■□□□□ 0.54
HLA-DQB3-203ENST00000425319 METP08581 1390 aa18.42■□□□□ 0.54
HLA-DQB3-203ENST00000425319 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
HLA-DQB3-203ENST00000425319 LRP6O75581 1613 aa18.4■□□□□ 0.54
HLA-DQB3-203ENST00000425319 ADAMTS2O95450 1211 aa18.39■□□□□ 0.53
HLA-DQB3-203ENST00000425319 MST1RQ04912 1400 aa18.39■□□□□ 0.53
HLA-DQB3-203ENST00000425319 ADGRL3Q9HAR2 1447 aa18.38■□□□□ 0.53
HLA-DQB3-203ENST00000425319 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
HLA-DQB3-203ENST00000425319 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
HLA-DQB3-203ENST00000425319 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
HLA-DQB3-203ENST00000425319 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
HLA-DQB3-203ENST00000425319 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
HLA-DQB3-203ENST00000425319 USP21Q9UK80 565 aa18.36■□□□□ 0.53
HLA-DQB3-203ENST00000425319 TRPC5Q9UL62 973 aaPredicted RBP18.36■□□□□ 0.53
HLA-DQB3-203ENST00000425319 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
HLA-DQB3-203ENST00000425319 PNPLA6Q8IY17 1366 aa18.33■□□□□ 0.53
HLA-DQB3-203ENST00000425319 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
HLA-DQB3-203ENST00000425319 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
HLA-DQB3-203ENST00000425319 NPHP3Q7Z494 1330 aa18.32■□□□□ 0.52
HLA-DQB3-203ENST00000425319 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
HLA-DQB3-203ENST00000425319 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
HLA-DQB3-203ENST00000425319 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
HLA-DQB3-203ENST00000425319 HFM1A2PYH4 1435 aa18.3■□□□□ 0.52
HLA-DQB3-203ENST00000425319 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
HLA-DQB3-203ENST00000425319 CCDC125Q86Z20 511 aa18.28■□□□□ 0.52
HLA-DQB3-203ENST00000425319 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
HLA-DQB3-203ENST00000425319 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
HLA-DQB3-203ENST00000425319 XRN1Q8IZH2 1706 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB3-203ENST00000425319 NAIPQ13075 1403 aa18.27■□□□□ 0.52
HLA-DQB3-203ENST00000425319 RGL3Q3MIN7 710 aa18.27■□□□□ 0.52
HLA-DQB3-203ENST00000425319 STK26Q9P289 416 aa18.27■□□□□ 0.52
HLA-DQB3-203ENST00000425319 HAP1P54257 671 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQB3-203ENST00000425319 FNBP4Q8N3X1 1017 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQB3-203ENST00000425319 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
HLA-DQB3-203ENST00000425319 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
HLA-DQB3-203ENST00000425319 NEXMIFQ5QGS0 1516 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms