RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CARD11Q9BXL7 1154 aa21.09■□□□□ 0.97
CALD1-206ENST00000424922 CEBPAP49715 358 aaPredicted RBP21.08■□□□□ 0.97
CALD1-206ENST00000424922 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
CALD1-206ENST00000424922 NBPF1Q3BBV0 1214 aa21.07■□□□□ 0.96
CALD1-206ENST00000424922 RIMS1Q86UR5 1692 aaKnown RBP21.07■□□□□ 0.96
CALD1-206ENST00000424922 ADGRF5Q8IZF2 1346 aa21.07■□□□□ 0.96
CALD1-206ENST00000424922 NEXMIFQ5QGS0 1516 aa21.06■□□□□ 0.96
CALD1-206ENST00000424922 STAG3Q9UJ98 1225 aa21.06■□□□□ 0.96
CALD1-206ENST00000424922 TNRQ92752 1358 aa21.06■□□□□ 0.96
CALD1-206ENST00000424922 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
CALD1-206ENST00000424922 USP47Q96K76 1375 aa21.05■□□□□ 0.96
CALD1-206ENST00000424922 ADAMTSL3P82987 1691 aa21.05■□□□□ 0.96
CALD1-206ENST00000424922 KIAA1210Q9ULL0 1709 aa21.05■□□□□ 0.96
CALD1-206ENST00000424922 NRXN1Q9ULB1 1477 aa21.04■□□□□ 0.96
CALD1-206ENST00000424922 LAMC1P11047 1609 aa21.03■□□□□ 0.96
CALD1-206ENST00000424922 NUTM2DQ5VT03 806 aaPredicted RBP21.03■□□□□ 0.96
CALD1-206ENST00000424922 GPRASP1Q5JY77 1395 aa21.03■□□□□ 0.96
CALD1-206ENST00000424922 A2ML1A8K2U0 1454 aa21.01■□□□□ 0.95
CALD1-206ENST00000424922 VGFO15240 615 aaPredicted RBP20.99■□□□□ 0.95
CALD1-206ENST00000424922 UBR1Q8IWV7 1749 aa20.99■□□□□ 0.95
CALD1-206ENST00000424922 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
CALD1-206ENST00000424922 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
CALD1-206ENST00000424922 KDM5AP29375 1690 aaKnown RBP20.98■□□□□ 0.95
CALD1-206ENST00000424922 POLR1AO95602 1720 aaPredicted RBP20.97■□□□□ 0.95
CALD1-206ENST00000424922 IQGAP1P46940 1657 aa20.96■□□□□ 0.95
CALD1-206ENST00000424922 NLRP1Q9C000 1473 aa20.95■□□□□ 0.94
CALD1-206ENST00000424922 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
CALD1-206ENST00000424922 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
CALD1-206ENST00000424922 YTHDC1Q96MU7 727 aaKnown RBP20.95■□□□□ 0.94
CALD1-206ENST00000424922 RIMS2Q9UQ26 1411 aa20.93■□□□□ 0.94
CALD1-206ENST00000424922 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
CALD1-206ENST00000424922 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
CALD1-206ENST00000424922 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
CALD1-206ENST00000424922 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
CALD1-206ENST00000424922 MYO3AQ8NEV4 1616 aa20.92■□□□□ 0.94
CALD1-206ENST00000424922 DDX10Q13206 875 aaKnown RBP20.92■□□□□ 0.94
CALD1-206ENST00000424922 WASHC2AQ641Q2 1341 aa20.91■□□□□ 0.94
CALD1-206ENST00000424922 SETBP1Q9Y6X0 1596 aa20.91■□□□□ 0.94
CALD1-206ENST00000424922 SETD1BQ9UPS6 1966 aaKnown RBP20.9■□□□□ 0.94
CALD1-206ENST00000424922 SCAF11Q99590 1463 aaKnown RBP20.9■□□□□ 0.94
CALD1-206ENST00000424922 CCDC7Q96M83 1385 aa20.87■□□□□ 0.93
CALD1-206ENST00000424922 ADGRB1O14514 1584 aa20.87■□□□□ 0.93
CALD1-206ENST00000424922 TMEM132EQ6IEE7 984 aa20.86■□□□□ 0.93
CALD1-206ENST00000424922 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
CALD1-206ENST00000424922 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
CALD1-206ENST00000424922 KIF7Q2M1P5 1343 aa20.85■□□□□ 0.93
CALD1-206ENST00000424922 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
CALD1-206ENST00000424922 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
CALD1-206ENST00000424922 PTPRMP28827 1452 aa20.83■□□□□ 0.93
CALD1-206ENST00000424922 CEP170BQ9Y4F5 1589 aaPredicted RBP20.83■□□□□ 0.93
CALD1-206ENST00000424922 EIF3AQ14152 1382 aaKnown RBP20.82■□□□□ 0.92
CALD1-206ENST00000424922 TESK2Q96S53 571 aa20.81■□□□□ 0.92
CALD1-206ENST00000424922 NRXN3Q9Y4C0 1643 aa20.81■□□□□ 0.92
CALD1-206ENST00000424922 SETD1AO15047 1707 aaKnown RBP20.8■□□□□ 0.92
CALD1-206ENST00000424922 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
CALD1-206ENST00000424922 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
CALD1-206ENST00000424922 POLR3GLQ9BT43 218 aa20.8■□□□□ 0.92
CALD1-206ENST00000424922 THEMISQ8N1K5 641 aaPredicted RBP20.8■□□□□ 0.92
CALD1-206ENST00000424922 TRAK1Q9UPV9 953 aa20.8■□□□□ 0.92
CALD1-206ENST00000424922 SLIT1O75093 1534 aa20.79■□□□□ 0.92
CALD1-206ENST00000424922 LTKP29376 864 aa20.78■□□□□ 0.92
CALD1-206ENST00000424922 ARHGEF28Q8N1W1 1705 aaKnown RBP20.78■□□□□ 0.92
CALD1-206ENST00000424922 TXNDC2Q86VQ3 553 aa20.77■□□□□ 0.92
CALD1-206ENST00000424922 ARHGAP23Q9P227 1491 aa20.77■□□□□ 0.92
CALD1-206ENST00000424922 BCANQ96GW7 911 aa20.76■□□□□ 0.91
CALD1-206ENST00000424922 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
CALD1-206ENST00000424922 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
CALD1-206ENST00000424922 QRICH2Q9H0J4 1663 aa20.75■□□□□ 0.91
CALD1-206ENST00000424922 TMF1P82094 1093 aa20.74■□□□□ 0.91
CALD1-206ENST00000424922 STK26Q9P289 416 aa20.74■□□□□ 0.91
CALD1-206ENST00000424922 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
CALD1-206ENST00000424922 CENPJQ9HC77 1338 aaPredicted RBP20.73■□□□□ 0.91
CALD1-206ENST00000424922 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
CALD1-206ENST00000424922 CCER2I3L3R5 266 aa20.69■□□□□ 0.9
CALD1-206ENST00000424922 METP08581 1390 aa20.69■□□□□ 0.9
CALD1-206ENST00000424922 ADAMTS13Q76LX8 1427 aa20.68■□□□□ 0.9
CALD1-206ENST00000424922 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
CALD1-206ENST00000424922 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
CALD1-206ENST00000424922 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
CALD1-206ENST00000424922 LRPPRCP42704 1394 aaKnown RBP20.66■□□□□ 0.9
CALD1-206ENST00000424922 ANP32CO43423 234 aa20.65■□□□□ 0.9
CALD1-206ENST00000424922 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
CALD1-206ENST00000424922 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
CALD1-206ENST00000424922 CDCA8Q53HL2 280 aa20.64■□□□□ 0.89
CALD1-206ENST00000424922 MED14O60244 1454 aa20.64■□□□□ 0.89
CALD1-206ENST00000424922 ANKLE2Q86XL3 938 aa20.63■□□□□ 0.89
CALD1-206ENST00000424922 PRAM1Q96QH2 718 aa20.63■□□□□ 0.89
CALD1-206ENST00000424922 KNDC1Q76NI1 1749 aa20.63■□□□□ 0.89
CALD1-206ENST00000424922 POGKQ9P215 609 aa20.63■□□□□ 0.89
CALD1-206ENST00000424922 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
CALD1-206ENST00000424922 DLC1Q96QB1 1528 aa20.62■□□□□ 0.89
CALD1-206ENST00000424922 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
CALD1-206ENST00000424922 MYOM1P52179 1685 aa20.6■□□□□ 0.89
CALD1-206ENST00000424922 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
CALD1-206ENST00000424922 WAPLQ7Z5K2 1190 aa20.59■□□□□ 0.89
CALD1-206ENST00000424922 TULP4Q9NRJ4 1543 aa20.57■□□□□ 0.88
CALD1-206ENST00000424922 MINK1Q8N4C8 1332 aaPredicted RBP20.57■□□□□ 0.88
CALD1-206ENST00000424922 CPS1P31327 1500 aa20.57■□□□□ 0.88
CALD1-206ENST00000424922 TECPR2O15040 1411 aa20.57■□□□□ 0.88
CALD1-206ENST00000424922 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms