RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 MFSD10Q14728 455 aa8.56□□□□□ -1.04
VPS8-205ENST00000424721 PPP1R15BQ5SWA1 713 aa8.56□□□□□ -1.04
VPS8-205ENST00000424721 ZFYVE16Q7Z3T8 1539 aa8.55□□□□□ -1.04
VPS8-205ENST00000424721 BCORL1Q5H9F3 1711 aa8.55□□□□□ -1.04
VPS8-205ENST00000424721 HSPA2P54652 639 aa8.55□□□□□ -1.04
VPS8-205ENST00000424721 PLPP6Q8IY26 295 aa8.55□□□□□ -1.04
VPS8-205ENST00000424721 CERKQ8TCT0 537 aa8.55□□□□□ -1.04
VPS8-205ENST00000424721 TROQ12816 1431 aaPredicted RBP8.54□□□□□ -1.04
VPS8-205ENST00000424721 C9orf84Q5VXU9 1444 aa8.54□□□□□ -1.04
VPS8-205ENST00000424721 PCF11O94913 1555 aaKnown RBP8.53□□□□□ -1.04
VPS8-205ENST00000424721 ZNF518AQ6AHZ1 1483 aa8.53□□□□□ -1.04
VPS8-205ENST00000424721 E2F4Q16254 413 aa8.53□□□□□ -1.04
VPS8-205ENST00000424721 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
VPS8-205ENST00000424721 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
VPS8-205ENST00000424721 CDK13Q14004 1512 aaKnown RBP8.53□□□□□ -1.04
VPS8-205ENST00000424721 ZMYM4Q5VZL5 1548 aa8.53□□□□□ -1.04
VPS8-205ENST00000424721 YEATS2Q9ULM3 1422 aa8.53□□□□□ -1.04
VPS8-205ENST00000424721 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
VPS8-205ENST00000424721 KCNV2Q8TDN2 545 aa8.52□□□□□ -1.05
VPS8-205ENST00000424721 ARHGEF40Q8TER5 1519 aa8.52□□□□□ -1.05
VPS8-205ENST00000424721 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 MADDQ8WXG6 1647 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 ARHGAP5Q13017 1502 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 FRMPD1Q5SYB0 1578 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 RICTORQ6R327 1708 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 CCDC18Q5T9S5 1454 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 LMTK3Q96Q04 1460 aa8.51□□□□□ -1.05
VPS8-205ENST00000424721 CASKIN1Q8WXD9 1431 aa8.5□□□□□ -1.05
VPS8-205ENST00000424721 CFDP1Q9UEE9 299 aaPredicted RBP8.5□□□□□ -1.05
VPS8-205ENST00000424721 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
VPS8-205ENST00000424721 TTC37Q6PGP7 1564 aa8.49□□□□□ -1.05
VPS8-205ENST00000424721 RSPH4AQ5TD94 716 aa8.49□□□□□ -1.05
VPS8-205ENST00000424721 KIF14Q15058 1648 aa8.49□□□□□ -1.05
VPS8-205ENST00000424721 MLH3Q9UHC1 1453 aa8.49□□□□□ -1.05
VPS8-205ENST00000424721 RIMS1Q86UR5 1692 aaKnown RBP8.49□□□□□ -1.05
VPS8-205ENST00000424721 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
VPS8-205ENST00000424721 HOXB3P14651 431 aaPredicted RBP8.48□□□□□ -1.05
VPS8-205ENST00000424721 HNRNPMP52272 730 aaKnown RBP eCLIP8.48□□□□□ -1.05
VPS8-205ENST00000424721 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
VPS8-205ENST00000424721 SETD1BQ9UPS6 1966 aaKnown RBP8.48□□□□□ -1.05
VPS8-205ENST00000424721 CNTLNQ9NXG0 1405 aa8.47□□□□□ -1.05
VPS8-205ENST00000424721 TRAPPC8Q9Y2L5 1435 aa8.47□□□□□ -1.05
VPS8-205ENST00000424721 MYO5CQ9NQX4 1742 aa8.47□□□□□ -1.05
VPS8-205ENST00000424721 SNPHO15079 494 aa8.47□□□□□ -1.05
VPS8-205ENST00000424721 DOK7Q18PE1 504 aa8.47□□□□□ -1.05
VPS8-205ENST00000424721 ARHGEF12Q9NZN5 1544 aa8.46□□□□□ -1.05
VPS8-205ENST00000424721 CAMK2BQ13554 666 aa8.46□□□□□ -1.06
VPS8-205ENST00000424721 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
VPS8-205ENST00000424721 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.06
VPS8-205ENST00000424721 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
VPS8-205ENST00000424721 PLEKHH2Q8IVE3 1493 aa8.45□□□□□ -1.06
VPS8-205ENST00000424721 GGT6Q6P531 493 aa8.45□□□□□ -1.06
VPS8-205ENST00000424721 ZNF710Q8N1W2 664 aa8.45□□□□□ -1.06
VPS8-205ENST00000424721 MTUS2Q5JR59 1369 aa8.45□□□□□ -1.06
VPS8-205ENST00000424721 RIMBP2O15034 1052 aa8.44□□□□□ -1.06
VPS8-205ENST00000424721 SLC34A2O95436 690 aa8.44□□□□□ -1.06
VPS8-205ENST00000424721 ZMYM3Q14202 1370 aa8.44□□□□□ -1.06
VPS8-205ENST00000424721 PTPRTO14522 1441 aa8.44□□□□□ -1.06
VPS8-205ENST00000424721 KIAA1107Q9UPP5 1409 aa8.44□□□□□ -1.06
VPS8-205ENST00000424721 AGLP35573 1532 aa8.44□□□□□ -1.06
VPS8-205ENST00000424721 TSPY4P0CV99 314 aa8.43□□□□□ -1.06
VPS8-205ENST00000424721 TSPY10P0CW01 314 aa8.43□□□□□ -1.06
VPS8-205ENST00000424721 ARIH1Q9Y4X5 557 aaPredicted RBP8.43□□□□□ -1.06
VPS8-205ENST00000424721 FYCO1Q9BQS8 1478 aa8.43□□□□□ -1.06
VPS8-205ENST00000424721 FER1L4A9Z1Z3 1794 aa8.43□□□□□ -1.06
VPS8-205ENST00000424721 TULP1O00294 542 aaPredicted RBP8.42□□□□□ -1.06
VPS8-205ENST00000424721 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
VPS8-205ENST00000424721 PTCD2Q8WV60 388 aaKnown RBP8.42□□□□□ -1.06
VPS8-205ENST00000424721 FAM163AQ96GL9 167 aaPredicted RBP8.42□□□□□ -1.06
VPS8-205ENST00000424721 KDM5CP41229 1560 aa8.42□□□□□ -1.06
VPS8-205ENST00000424721 REREQ9P2R6 1566 aa8.42□□□□□ -1.06
VPS8-205ENST00000424721 NPATQ14207 1427 aa8.41□□□□□ -1.06
VPS8-205ENST00000424721 DPYSL4O14531 572 aa8.41□□□□□ -1.06
VPS8-205ENST00000424721 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
VPS8-205ENST00000424721 KHSRPQ92945 711 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS8-205ENST00000424721 PCDHGA4Q9Y5G9 962 aa8.41□□□□□ -1.06
VPS8-205ENST00000424721 GPATCH8Q9UKJ3 1502 aaKnown RBP8.4□□□□□ -1.06
VPS8-205ENST00000424721 PRKCSHP14314 528 aaPredicted RBP8.4□□□□□ -1.06
VPS8-205ENST00000424721 MAP3K9P80192 1104 aa8.4□□□□□ -1.06
VPS8-205ENST00000424721 ZSWIM6Q9HCJ5 1215 aa8.4□□□□□ -1.06
VPS8-205ENST00000424721 PREX1Q8TCU6 1659 aa8.4□□□□□ -1.07
VPS8-205ENST00000424721 ST18O60284 1047 aa8.39□□□□□ -1.07
VPS8-205ENST00000424721 TBC1D12O60347 775 aa8.39□□□□□ -1.07
VPS8-205ENST00000424721 GPR153Q6NV75 609 aa8.39□□□□□ -1.07
VPS8-205ENST00000424721 THEMISQ8N1K5 641 aaPredicted RBP8.39□□□□□ -1.07
VPS8-205ENST00000424721 CDC42BPBQ9Y5S2 1711 aa8.38□□□□□ -1.07
VPS8-205ENST00000424721 WASHC2CQ9Y4E1 1318 aa8.38□□□□□ -1.07
VPS8-205ENST00000424721 KIF3BO15066 747 aa8.38□□□□□ -1.07
VPS8-205ENST00000424721 DIP2CQ9Y2E4 1556 aa8.38□□□□□ -1.07
VPS8-205ENST00000424721 ABCC1P33527 1531 aa8.38□□□□□ -1.07
VPS8-205ENST00000424721 A2MP01023 1474 aa8.38□□□□□ -1.07
VPS8-205ENST00000424721 RTEL1-TNFRSF6BF6WH68 1400 aa8.37□□□□□ -1.07
VPS8-205ENST00000424721 DHX29Q7Z478 1369 aaKnown RBP8.37□□□□□ -1.07
VPS8-205ENST00000424721 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
VPS8-205ENST00000424721 NUDT7P0C024 238 aa8.37□□□□□ -1.07
VPS8-205ENST00000424721 ANKLE2Q86XL3 938 aa8.37□□□□□ -1.07
VPS8-205ENST00000424721 DISP3Q9P2K9 1392 aa8.36□□□□□ -1.07
VPS8-205ENST00000424721 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
VPS8-205ENST00000424721 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
VPS8-205ENST00000424721 SAMD9LQ8IVG5 1584 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms