RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
TRBV22-1-201ENST00000424543 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
TRBV22-1-201ENST00000424543 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
TRBV22-1-201ENST00000424543 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
TRBV22-1-201ENST00000424543 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
TRBV22-1-201ENST00000424543 ITGAEP38570 1179 aa18.05■□□□□ 0.48
TRBV22-1-201ENST00000424543 BCANQ96GW7 911 aa18.05■□□□□ 0.48
TRBV22-1-201ENST00000424543 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
TRBV22-1-201ENST00000424543 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
TRBV22-1-201ENST00000424543 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
TRBV22-1-201ENST00000424543 KCNA6P17658 529 aa18.03■□□□□ 0.48
TRBV22-1-201ENST00000424543 CHGAP10645 457 aaKnown RBP18.02■□□□□ 0.48
TRBV22-1-201ENST00000424543 PROSER2Q86WR7 435 aaPredicted RBP18.02■□□□□ 0.48
TRBV22-1-201ENST00000424543 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
TRBV22-1-201ENST00000424543 NKTRP30414 1462 aaKnown RBP18.01■□□□□ 0.47
TRBV22-1-201ENST00000424543 PPP1R15AO75807 674 aaPredicted RBP17.99■□□□□ 0.47
TRBV22-1-201ENST00000424543 PLEKHG1Q9ULL1 1385 aa17.99■□□□□ 0.47
TRBV22-1-201ENST00000424543 ROCK1Q13464 1354 aa17.98■□□□□ 0.47
TRBV22-1-201ENST00000424543 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
TRBV22-1-201ENST00000424543 SPHKAPQ2M3C7 1700 aa17.97■□□□□ 0.47
TRBV22-1-201ENST00000424543 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
TRBV22-1-201ENST00000424543 NUP155O75694 1391 aa17.95■□□□□ 0.46
TRBV22-1-201ENST00000424543 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
TRBV22-1-201ENST00000424543 ADAMTS13Q76LX8 1427 aa17.95■□□□□ 0.46
TRBV22-1-201ENST00000424543 MSH6P52701 1360 aa17.93■□□□□ 0.46
TRBV22-1-201ENST00000424543 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
TRBV22-1-201ENST00000424543 NRXN3Q9Y4C0 1643 aa17.92■□□□□ 0.46
TRBV22-1-201ENST00000424543 DIP2AQ14689 1571 aa17.9■□□□□ 0.46
TRBV22-1-201ENST00000424543 CLTCL1P53675 1640 aa17.89■□□□□ 0.45
TRBV22-1-201ENST00000424543 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
TRBV22-1-201ENST00000424543 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
TRBV22-1-201ENST00000424543 SETD1AO15047 1707 aaKnown RBP17.88■□□□□ 0.45
TRBV22-1-201ENST00000424543 TRPM2O94759 1503 aa17.88■□□□□ 0.45
TRBV22-1-201ENST00000424543 SLAIN2Q9P270 581 aa17.87■□□□□ 0.45
TRBV22-1-201ENST00000424543 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
TRBV22-1-201ENST00000424543 C14orf37Q86TY3 774 aa17.86■□□□□ 0.45
TRBV22-1-201ENST00000424543 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRBV22-1-201ENST00000424543 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
TRBV22-1-201ENST00000424543 HDGFP51858 240 aaKnown RBP17.85■□□□□ 0.45
TRBV22-1-201ENST00000424543 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
TRBV22-1-201ENST00000424543 KIF1BO60333 1816 aa17.83■□□□□ 0.44
TRBV22-1-201ENST00000424543 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.44
TRBV22-1-201ENST00000424543 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
TRBV22-1-201ENST00000424543 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
TRBV22-1-201ENST00000424543 LRP6O75581 1613 aa17.81■□□□□ 0.44
TRBV22-1-201ENST00000424543 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
TRBV22-1-201ENST00000424543 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
TRBV22-1-201ENST00000424543 NAIPQ13075 1403 aa17.8■□□□□ 0.44
TRBV22-1-201ENST00000424543 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
TRBV22-1-201ENST00000424543 NALCNQ8IZF0 1738 aa17.79■□□□□ 0.44
TRBV22-1-201ENST00000424543 METP08581 1390 aa17.79■□□□□ 0.44
TRBV22-1-201ENST00000424543 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
TRBV22-1-201ENST00000424543 JCADQ9P266 1359 aa17.79■□□□□ 0.44
TRBV22-1-201ENST00000424543 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
TRBV22-1-201ENST00000424543 NCOA3Q9Y6Q9 1424 aa17.77■□□□□ 0.44
TRBV22-1-201ENST00000424543 ATF3P18847 181 aa17.76■□□□□ 0.43
TRBV22-1-201ENST00000424543 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
TRBV22-1-201ENST00000424543 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
TRBV22-1-201ENST00000424543 CADPS2Q86UW7 1296 aa17.74■□□□□ 0.43
TRBV22-1-201ENST00000424543 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
TRBV22-1-201ENST00000424543 BRINP3Q76B58 766 aa17.73■□□□□ 0.43
TRBV22-1-201ENST00000424543 MST1RQ04912 1400 aa17.72■□□□□ 0.43
TRBV22-1-201ENST00000424543 PPLO60437 1756 aa17.72■□□□□ 0.43
TRBV22-1-201ENST00000424543 DDX17Q92841 729 aaKnown RBP17.71■□□□□ 0.43
TRBV22-1-201ENST00000424543 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
TRBV22-1-201ENST00000424543 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
TRBV22-1-201ENST00000424543 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
TRBV22-1-201ENST00000424543 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
TRBV22-1-201ENST00000424543 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
TRBV22-1-201ENST00000424543 DCCP43146 1447 aa17.68■□□□□ 0.42
TRBV22-1-201ENST00000424543 FOXD1Q16676 465 aa17.68■□□□□ 0.42
TRBV22-1-201ENST00000424543 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
TRBV22-1-201ENST00000424543 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
TRBV22-1-201ENST00000424543 SPATA31A6Q5VVP1 1343 aa17.66■□□□□ 0.42
TRBV22-1-201ENST00000424543 ROBO2Q9HCK4 1378 aa17.64■□□□□ 0.41
TRBV22-1-201ENST00000424543 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
TRBV22-1-201ENST00000424543 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
TRBV22-1-201ENST00000424543 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
TRBV22-1-201ENST00000424543 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
TRBV22-1-201ENST00000424543 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
TRBV22-1-201ENST00000424543 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
TRBV22-1-201ENST00000424543 AFF2P51816 1311 aa17.57■□□□□ 0.4
TRBV22-1-201ENST00000424543 ORAI2Q96SN7 254 aa17.57■□□□□ 0.4
TRBV22-1-201ENST00000424543 LAMC1P11047 1609 aa17.57■□□□□ 0.4
TRBV22-1-201ENST00000424543 ADGRF5Q8IZF2 1346 aa17.56■□□□□ 0.4
TRBV22-1-201ENST00000424543 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
TRBV22-1-201ENST00000424543 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
TRBV22-1-201ENST00000424543 RGL3Q3MIN7 710 aa17.54■□□□□ 0.4
TRBV22-1-201ENST00000424543 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
TRBV22-1-201ENST00000424543 LRRC59Q96AG4 307 aaKnown RBP17.53■□□□□ 0.4
TRBV22-1-201ENST00000424543 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
TRBV22-1-201ENST00000424543 RPGRIP1LQ68CZ1 1315 aa17.52■□□□□ 0.4
TRBV22-1-201ENST00000424543 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
TRBV22-1-201ENST00000424543 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
TRBV22-1-201ENST00000424543 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.4
TRBV22-1-201ENST00000424543 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.39
TRBV22-1-201ENST00000424543 RXRBP28702 533 aa17.51■□□□□ 0.39
TRBV22-1-201ENST00000424543 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
TRBV22-1-201ENST00000424543 STK26Q9P289 416 aa17.51■□□□□ 0.39
TRBV22-1-201ENST00000424543 RGS12O14924 1447 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms