RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 ATP7AQ04656 1500 aa9.9□□□□□ -0.82
SCN7A-203ENST00000424326 BRD4O60885 1362 aaPredicted RBP9.9□□□□□ -0.82
SCN7A-203ENST00000424326 SOX12O15370 315 aa9.9□□□□□ -0.82
SCN7A-203ENST00000424326 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
SCN7A-203ENST00000424326 TMEM132EQ6IEE7 984 aa9.9□□□□□ -0.82
SCN7A-203ENST00000424326 CSB-PGBD3P0DP91 1061 aa9.9□□□□□ -0.83
SCN7A-203ENST00000424326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.89□□□□□ -0.83
SCN7A-203ENST00000424326 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
SCN7A-203ENST00000424326 ATP10AO60312 1499 aa9.89□□□□□ -0.83
SCN7A-203ENST00000424326 PRAM1Q96QH2 718 aa9.88□□□□□ -0.83
SCN7A-203ENST00000424326 ADGBQ8N7X0 1667 aa9.88□□□□□ -0.83
SCN7A-203ENST00000424326 PSME1Q06323 249 aa9.88□□□□□ -0.83
SCN7A-203ENST00000424326 TNRQ92752 1358 aa9.88□□□□□ -0.83
SCN7A-203ENST00000424326 MAGI3Q5TCQ9 1506 aa9.88□□□□□ -0.83
SCN7A-203ENST00000424326 ARAP3Q8WWN8 1544 aa9.88□□□□□ -0.83
SCN7A-203ENST00000424326 A0A0G2JS52 829 aa9.87□□□□□ -0.83
SCN7A-203ENST00000424326 GPRASP1Q5JY77 1395 aa9.87□□□□□ -0.83
SCN7A-203ENST00000424326 DIAPH1O60610 1272 aaKnown RBP9.87□□□□□ -0.83
SCN7A-203ENST00000424326 SCAF11Q99590 1463 aaKnown RBP9.87□□□□□ -0.83
SCN7A-203ENST00000424326 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
SCN7A-203ENST00000424326 IDI1Q13907 227 aa9.86□□□□□ -0.83
SCN7A-203ENST00000424326 ZCCHC11Q5TAX3 1644 aaKnown RBP9.86□□□□□ -0.83
SCN7A-203ENST00000424326 HDAC5Q9UQL6 1122 aa9.86□□□□□ -0.83
SCN7A-203ENST00000424326 ZBED9Q6R2W3 1325 aa9.86□□□□□ -0.83
SCN7A-203ENST00000424326 RCAN3Q9UKA8 241 aa9.86□□□□□ -0.83
SCN7A-203ENST00000424326 EIF2AK4Q9P2K8 1649 aaKnown RBP9.86□□□□□ -0.83
SCN7A-203ENST00000424326 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
SCN7A-203ENST00000424326 CLASP1Q7Z460 1538 aa9.85□□□□□ -0.83
SCN7A-203ENST00000424326 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
SCN7A-203ENST00000424326 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
SCN7A-203ENST00000424326 NINLQ9Y2I6 1382 aa9.85□□□□□ -0.83
SCN7A-203ENST00000424326 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
SCN7A-203ENST00000424326 MAGI2Q86UL8 1455 aa9.85□□□□□ -0.83
SCN7A-203ENST00000424326 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
SCN7A-203ENST00000424326 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
SCN7A-203ENST00000424326 GCC2Q8IWJ2 1684 aa9.85□□□□□ -0.83
SCN7A-203ENST00000424326 MAST1Q9Y2H9 1570 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 E9PSI1 815 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 CDK19Q9BWU1 502 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 NUTM2FA1L443 756 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 RALGAPBQ86X10 1494 aa9.84□□□□□ -0.83
SCN7A-203ENST00000424326 IRX6P78412 446 aaPredicted RBP9.83□□□□□ -0.84
SCN7A-203ENST00000424326 NOS1P29475 1434 aa9.83□□□□□ -0.84
SCN7A-203ENST00000424326 CASC1Q6TDU7 716 aa9.83□□□□□ -0.84
SCN7A-203ENST00000424326 MBD5Q9P267 1494 aa9.83□□□□□ -0.84
SCN7A-203ENST00000424326 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
SCN7A-203ENST00000424326 STK31Q9BXU1 1019 aa9.82□□□□□ -0.84
SCN7A-203ENST00000424326 ZFYVE16Q7Z3T8 1539 aa9.82□□□□□ -0.84
SCN7A-203ENST00000424326 PZPP20742 1482 aa9.82□□□□□ -0.84
SCN7A-203ENST00000424326 FBXO31Q5XUX0 539 aaPredicted RBP9.81□□□□□ -0.84
SCN7A-203ENST00000424326 ABCC1P33527 1531 aa9.81□□□□□ -0.84
SCN7A-203ENST00000424326 MLH3Q9UHC1 1453 aa9.81□□□□□ -0.84
SCN7A-203ENST00000424326 AEBP2Q6ZN18 517 aaPredicted RBP9.81□□□□□ -0.84
SCN7A-203ENST00000424326 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
SCN7A-203ENST00000424326 ADGRF5Q8IZF2 1346 aa9.8□□□□□ -0.84
SCN7A-203ENST00000424326 DMRT2Q9Y5R5 561 aa9.8□□□□□ -0.84
SCN7A-203ENST00000424326 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
SCN7A-203ENST00000424326 C1orf141Q5JVX7 400 aa9.8□□□□□ -0.84
SCN7A-203ENST00000424326 CCDC61Q9Y6R9 512 aa9.8□□□□□ -0.84
SCN7A-203ENST00000424326 PRAG1Q86YV5 1406 aa9.79□□□□□ -0.84
SCN7A-203ENST00000424326 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
SCN7A-203ENST00000424326 DDRGK1Q96HY6 314 aa9.79□□□□□ -0.84
SCN7A-203ENST00000424326 NSD2O96028 1365 aa9.79□□□□□ -0.84
SCN7A-203ENST00000424326 PPP2R1AP30153 589 aa9.79□□□□□ -0.84
SCN7A-203ENST00000424326 CCDC146Q8IYE0 955 aa9.79□□□□□ -0.84
SCN7A-203ENST00000424326 TTC37Q6PGP7 1564 aa9.78□□□□□ -0.84
SCN7A-203ENST00000424326 SLC26A8Q96RN1 970 aa9.78□□□□□ -0.84
SCN7A-203ENST00000424326 RIMS2Q9UQ26 1411 aa9.78□□□□□ -0.84
SCN7A-203ENST00000424326 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
SCN7A-203ENST00000424326 NLRP6P59044 892 aa9.78□□□□□ -0.84
SCN7A-203ENST00000424326 CABP1Q9NZU7 370 aa9.78□□□□□ -0.84
SCN7A-203ENST00000424326 EVA1CP58658 441 aa9.77□□□□□ -0.84
SCN7A-203ENST00000424326 GGNBP2Q9H3C7 697 aa9.77□□□□□ -0.84
SCN7A-203ENST00000424326 ZMYM3Q14202 1370 aa9.77□□□□□ -0.84
SCN7A-203ENST00000424326 ESCO1Q5FWF5 840 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 RWDD1Q9H446 243 aaPredicted RBP9.77□□□□□ -0.85
SCN7A-203ENST00000424326 SMG6Q86US8 1419 aaKnown RBP9.77□□□□□ -0.85
SCN7A-203ENST00000424326 UHRF1BP1Q6BDS2 1440 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 ARXQ96QS3 562 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 SLC12A5Q9H2X9 1139 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 SMC4Q9NTJ3 1288 aa9.77□□□□□ -0.85
SCN7A-203ENST00000424326 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
SCN7A-203ENST00000424326 SENP3-EIF4A1A0A087X0R7 540 aa9.76□□□□□ -0.85
SCN7A-203ENST00000424326 BECN1Q14457 450 aa9.76□□□□□ -0.85
SCN7A-203ENST00000424326 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
SCN7A-203ENST00000424326 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
SCN7A-203ENST00000424326 ERCC6L2Q5T890 1561 aa9.76□□□□□ -0.85
SCN7A-203ENST00000424326 MTHFSP49914 203 aa9.75□□□□□ -0.85
SCN7A-203ENST00000424326 GNAI1P63096 354 aa9.75□□□□□ -0.85
SCN7A-203ENST00000424326 AAMPQ13685 434 aa9.75□□□□□ -0.85
SCN7A-203ENST00000424326 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
SCN7A-203ENST00000424326 APAF1O14727 1248 aa9.75□□□□□ -0.85
SCN7A-203ENST00000424326 AMOTL2Q9Y2J4 779 aa9.75□□□□□ -0.85
SCN7A-203ENST00000424326 PLXNC1O60486 1568 aa9.74□□□□□ -0.85
SCN7A-203ENST00000424326 HECW2Q9P2P5 1572 aa9.74□□□□□ -0.85
SCN7A-203ENST00000424326 TEFQ10587 303 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms