RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 PRKCSHP14314 528 aaPredicted RBP22.64■■□□□ 1.22
CMTM3-202ENST00000424011 ADGRB3O60242 1522 aa22.64■■□□□ 1.21
CMTM3-202ENST00000424011 NOS1P29475 1434 aa22.64■■□□□ 1.21
CMTM3-202ENST00000424011 KIAA1210Q9ULL0 1709 aa22.63■■□□□ 1.21
CMTM3-202ENST00000424011 TMF1P82094 1093 aa22.63■■□□□ 1.21
CMTM3-202ENST00000424011 TESK2Q96S53 571 aa22.63■■□□□ 1.21
CMTM3-202ENST00000424011 SCAF11Q99590 1463 aaKnown RBP22.62■■□□□ 1.21
CMTM3-202ENST00000424011 MLECQ14165 292 aa22.62■■□□□ 1.21
CMTM3-202ENST00000424011 RPGRIP1LQ68CZ1 1315 aa22.61■■□□□ 1.21
CMTM3-202ENST00000424011 EIF3AQ14152 1382 aaKnown RBP22.6■■□□□ 1.21
CMTM3-202ENST00000424011 CFAP65Q6ZU64 1925 aaKnown RBP22.59■■□□□ 1.21
CMTM3-202ENST00000424011 IQGAP1P46940 1657 aa22.58■■□□□ 1.21
CMTM3-202ENST00000424011 NRXN1Q9ULB1 1477 aa22.58■■□□□ 1.21
CMTM3-202ENST00000424011 KTN1Q86UP2 1357 aaKnown RBP22.58■■□□□ 1.21
CMTM3-202ENST00000424011 SLC24A1O60721 1099 aa22.58■■□□□ 1.2
CMTM3-202ENST00000424011 CHGAP10645 457 aaKnown RBP22.58■■□□□ 1.2
CMTM3-202ENST00000424011 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.2
CMTM3-202ENST00000424011 IFT172Q9UG01 1749 aa22.58■■□□□ 1.2
CMTM3-202ENST00000424011 MROH2AA6NES4 1674 aa22.57■■□□□ 1.2
CMTM3-202ENST00000424011 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
CMTM3-202ENST00000424011 ADGRF5Q8IZF2 1346 aa22.55■■□□□ 1.2
CMTM3-202ENST00000424011 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
CMTM3-202ENST00000424011 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
CMTM3-202ENST00000424011 SLC52A1Q9NWF4 448 aa22.54■■□□□ 1.2
CMTM3-202ENST00000424011 SYNMO15061 1565 aa22.54■■□□□ 1.2
CMTM3-202ENST00000424011 PIK3C2BO00750 1634 aa22.53■■□□□ 1.2
CMTM3-202ENST00000424011 FBXO31Q5XUX0 539 aaPredicted RBP22.53■■□□□ 1.2
CMTM3-202ENST00000424011 CLTCQ00610 1675 aaKnown RBP22.52■■□□□ 1.2
CMTM3-202ENST00000424011 IDI1Q13907 227 aa22.52■■□□□ 1.2
CMTM3-202ENST00000424011 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
CMTM3-202ENST00000424011 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
CMTM3-202ENST00000424011 RALBP1Q15311 655 aa22.51■■□□□ 1.19
CMTM3-202ENST00000424011 PREX1Q8TCU6 1659 aa22.5■■□□□ 1.19
CMTM3-202ENST00000424011 ERVK-7P63135 1459 aa22.49■■□□□ 1.19
CMTM3-202ENST00000424011 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
CMTM3-202ENST00000424011 ZMYM3Q14202 1370 aa22.49■■□□□ 1.19
CMTM3-202ENST00000424011 FKBP8Q14318 412 aa22.48■■□□□ 1.19
CMTM3-202ENST00000424011 PIK3C2GO75747 1445 aa22.48■■□□□ 1.19
CMTM3-202ENST00000424011 SETBP1Q9Y6X0 1596 aa22.48■■□□□ 1.19
CMTM3-202ENST00000424011 PPLO60437 1756 aa22.48■■□□□ 1.19
CMTM3-202ENST00000424011 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-202ENST00000424011 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-202ENST00000424011 C14orf93Q9H972 538 aaKnown RBP22.45■■□□□ 1.18
CMTM3-202ENST00000424011 SPATA31D1Q6ZQQ2 1576 aa22.44■■□□□ 1.18
CMTM3-202ENST00000424011 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
CMTM3-202ENST00000424011 MYBBP1AQ9BQG0 1328 aaKnown RBP22.43■■□□□ 1.18
CMTM3-202ENST00000424011 PANK3Q9H999 370 aa22.41■■□□□ 1.18
CMTM3-202ENST00000424011 ZFYVE9O95405 1425 aa22.41■■□□□ 1.18
CMTM3-202ENST00000424011 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
CMTM3-202ENST00000424011 TMC1Q8TDI8 760 aa22.4■■□□□ 1.18
CMTM3-202ENST00000424011 BCANQ96GW7 911 aa22.4■■□□□ 1.18
CMTM3-202ENST00000424011 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
CMTM3-202ENST00000424011 SBNO2Q9Y2G9 1366 aa22.4■■□□□ 1.18
CMTM3-202ENST00000424011 NEFLP07196 543 aa22.4■■□□□ 1.18
CMTM3-202ENST00000424011 PARD3Q8TEW0 1356 aa22.39■■□□□ 1.17
CMTM3-202ENST00000424011 MYO3AQ8NEV4 1616 aa22.38■■□□□ 1.17
CMTM3-202ENST00000424011 TMEM131LA2VDJ0 1609 aa22.37■■□□□ 1.17
CMTM3-202ENST00000424011 ADGRB1O14514 1584 aa22.36■■□□□ 1.17
CMTM3-202ENST00000424011 CENPJQ9HC77 1338 aaPredicted RBP22.35■■□□□ 1.17
CMTM3-202ENST00000424011 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
CMTM3-202ENST00000424011 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
CMTM3-202ENST00000424011 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
CMTM3-202ENST00000424011 KDM5AP29375 1690 aaKnown RBP22.33■■□□□ 1.16
CMTM3-202ENST00000424011 PNISRQ8TF01 805 aaKnown RBP22.32■■□□□ 1.16
CMTM3-202ENST00000424011 KNSTRNQ9Y448 316 aa22.32■■□□□ 1.16
CMTM3-202ENST00000424011 TNRQ92752 1358 aa22.31■■□□□ 1.16
CMTM3-202ENST00000424011 TRAK1Q9UPV9 953 aa22.31■■□□□ 1.16
CMTM3-202ENST00000424011 NUTM2DQ5VT03 806 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-202ENST00000424011 CEBPAP49715 358 aaPredicted RBP22.3■■□□□ 1.16
CMTM3-202ENST00000424011 A2ML1A8K2U0 1454 aa22.29■■□□□ 1.16
CMTM3-202ENST00000424011 ERICH6Q7L0X2 663 aa22.29■■□□□ 1.16
CMTM3-202ENST00000424011 MYO5BQ9ULV0 1848 aa22.29■■□□□ 1.16
CMTM3-202ENST00000424011 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
CMTM3-202ENST00000424011 TMEM132EQ6IEE7 984 aa22.28■■□□□ 1.16
CMTM3-202ENST00000424011 FER1L4A9Z1Z3 1794 aa22.26■■□□□ 1.15
CMTM3-202ENST00000424011 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
CMTM3-202ENST00000424011 NPC1L1Q9UHC9 1359 aa22.26■■□□□ 1.15
CMTM3-202ENST00000424011 LRPPRCP42704 1394 aaKnown RBP22.25■■□□□ 1.15
CMTM3-202ENST00000424011 MYOM1P52179 1685 aa22.24■■□□□ 1.15
CMTM3-202ENST00000424011 ASXL1Q8IXJ9 1541 aa22.23■■□□□ 1.15
CMTM3-202ENST00000424011 PUS7Q96PZ0 661 aaKnown RBP22.23■■□□□ 1.15
CMTM3-202ENST00000424011 C3P01024 1663 aa22.23■■□□□ 1.15
CMTM3-202ENST00000424011 QRICH2Q9H0J4 1663 aa22.22■■□□□ 1.15
CMTM3-202ENST00000424011 AMER1Q5JTC6 1135 aaPredicted RBP22.22■■□□□ 1.15
CMTM3-202ENST00000424011 NLRP1Q9C000 1473 aa22.2■■□□□ 1.14
CMTM3-202ENST00000424011 RIMS2Q9UQ26 1411 aa22.2■■□□□ 1.14
CMTM3-202ENST00000424011 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
CMTM3-202ENST00000424011 EVC2Q86UK5 1308 aa22.18■■□□□ 1.14
CMTM3-202ENST00000424011 INSRP06213 1382 aa22.18■■□□□ 1.14
CMTM3-202ENST00000424011 PLPPR3Q6T4P5 718 aa22.17■■□□□ 1.14
CMTM3-202ENST00000424011 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
CMTM3-202ENST00000424011 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.17■■□□□ 1.14
CMTM3-202ENST00000424011 HDGFP51858 240 aaKnown RBP22.15■■□□□ 1.14
CMTM3-202ENST00000424011 ADAMTSL3P82987 1691 aa22.14■■□□□ 1.14
CMTM3-202ENST00000424011 ALKQ9UM73 1620 aa22.14■■□□□ 1.13
CMTM3-202ENST00000424011 TMEM2Q9UHN6 1383 aa22.14■■□□□ 1.13
CMTM3-202ENST00000424011 UBR1Q8IWV7 1749 aa22.14■■□□□ 1.13
CMTM3-202ENST00000424011 YTHDC2Q9H6S0 1430 aaKnown RBP22.13■■□□□ 1.13
CMTM3-202ENST00000424011 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
CMTM3-202ENST00000424011 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms