RNA–Protein interactions for RNA: ENST00000423494.6

LRTOMT-205, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 1,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-205ENST00000423494 ADGRL2O95490 1459 aa17.05■□□□□ 0.32
LRTOMT-205ENST00000423494 TET3O43151 1660 aa17.04■□□□□ 0.32
LRTOMT-205ENST00000423494 CHGAP10645 457 aaKnown RBP17.04■□□□□ 0.32
LRTOMT-205ENST00000423494 MSH6P52701 1360 aa17.02■□□□□ 0.31
LRTOMT-205ENST00000423494 RPRD2Q5VT52 1461 aaKnown RBP17.01■□□□□ 0.31
LRTOMT-205ENST00000423494 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
LRTOMT-205ENST00000423494 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
LRTOMT-205ENST00000423494 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
LRTOMT-205ENST00000423494 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
LRTOMT-205ENST00000423494 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
LRTOMT-205ENST00000423494 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
LRTOMT-205ENST00000423494 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRTOMT-205ENST00000423494 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
LRTOMT-205ENST00000423494 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
LRTOMT-205ENST00000423494 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
LRTOMT-205ENST00000423494 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
LRTOMT-205ENST00000423494 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
LRTOMT-205ENST00000423494 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
LRTOMT-205ENST00000423494 ZFYVE9O95405 1425 aa16.96■□□□□ 0.3
LRTOMT-205ENST00000423494 TBX22Q9Y458 520 aa16.95■□□□□ 0.3
LRTOMT-205ENST00000423494 POTEAQ6S8J7 498 aa16.94■□□□□ 0.3
LRTOMT-205ENST00000423494 TMEM131LA2VDJ0 1609 aa16.94■□□□□ 0.3
LRTOMT-205ENST00000423494 ITGAEP38570 1179 aa16.93■□□□□ 0.3
LRTOMT-205ENST00000423494 PHLPP1O60346 1717 aa16.93■□□□□ 0.3
LRTOMT-205ENST00000423494 UNC13BO14795 1591 aa16.92■□□□□ 0.3
LRTOMT-205ENST00000423494 E9PCH4 1651 aa16.91■□□□□ 0.3
LRTOMT-205ENST00000423494 JCADQ9P266 1359 aa16.9■□□□□ 0.3
LRTOMT-205ENST00000423494 ATF3P18847 181 aa16.9■□□□□ 0.3
LRTOMT-205ENST00000423494 NUP155O75694 1391 aa16.89■□□□□ 0.3
LRTOMT-205ENST00000423494 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
LRTOMT-205ENST00000423494 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
LRTOMT-205ENST00000423494 CADPS2Q86UW7 1296 aa16.88■□□□□ 0.29
LRTOMT-205ENST00000423494 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
LRTOMT-205ENST00000423494 C19orf44Q9H6X5 657 aa16.87■□□□□ 0.29
LRTOMT-205ENST00000423494 IQGAP3Q86VI3 1631 aa16.86■□□□□ 0.29
LRTOMT-205ENST00000423494 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
LRTOMT-205ENST00000423494 PIK3R4Q99570 1358 aa16.86■□□□□ 0.29
LRTOMT-205ENST00000423494 ADAMTS13Q76LX8 1427 aa16.86■□□□□ 0.29
LRTOMT-205ENST00000423494 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
LRTOMT-205ENST00000423494 DIP2AQ14689 1571 aa16.85■□□□□ 0.29
LRTOMT-205ENST00000423494 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
LRTOMT-205ENST00000423494 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
LRTOMT-205ENST00000423494 TRPM2O94759 1503 aa16.83■□□□□ 0.28
LRTOMT-205ENST00000423494 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
LRTOMT-205ENST00000423494 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
LRTOMT-205ENST00000423494 ZNF772Q68DY9 489 aaPredicted RBP16.8■□□□□ 0.28
LRTOMT-205ENST00000423494 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
LRTOMT-205ENST00000423494 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
LRTOMT-205ENST00000423494 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
LRTOMT-205ENST00000423494 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
LRTOMT-205ENST00000423494 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
LRTOMT-205ENST00000423494 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
LRTOMT-205ENST00000423494 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.27
LRTOMT-205ENST00000423494 SPHKAPQ2M3C7 1700 aa16.76■□□□□ 0.27
LRTOMT-205ENST00000423494 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
LRTOMT-205ENST00000423494 LRP6O75581 1613 aa16.75■□□□□ 0.27
LRTOMT-205ENST00000423494 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
LRTOMT-205ENST00000423494 DCCP43146 1447 aa16.72■□□□□ 0.27
LRTOMT-205ENST00000423494 NRXN3Q9Y4C0 1643 aa16.72■□□□□ 0.27
LRTOMT-205ENST00000423494 SETBP1Q9Y6X0 1596 aa16.72■□□□□ 0.27
LRTOMT-205ENST00000423494 RXRBP28702 533 aa16.71■□□□□ 0.27
LRTOMT-205ENST00000423494 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
LRTOMT-205ENST00000423494 METP08581 1390 aa16.71■□□□□ 0.27
LRTOMT-205ENST00000423494 XRN1Q8IZH2 1706 aaKnown RBP16.7■□□□□ 0.26
LRTOMT-205ENST00000423494 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
LRTOMT-205ENST00000423494 KIF1BO60333 1816 aa16.69■□□□□ 0.26
LRTOMT-205ENST00000423494 MST1RQ04912 1400 aa16.69■□□□□ 0.26
LRTOMT-205ENST00000423494 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
LRTOMT-205ENST00000423494 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
LRTOMT-205ENST00000423494 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
LRTOMT-205ENST00000423494 SETD5Q9C0A6 1442 aa16.67■□□□□ 0.26
LRTOMT-205ENST00000423494 AFF2P51816 1311 aa16.67■□□□□ 0.26
LRTOMT-205ENST00000423494 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
LRTOMT-205ENST00000423494 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
LRTOMT-205ENST00000423494 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
LRTOMT-205ENST00000423494 C8orf37Q96NL8 207 aa16.65■□□□□ 0.26
LRTOMT-205ENST00000423494 NHSL1Q5SYE7 1610 aa16.65■□□□□ 0.26
LRTOMT-205ENST00000423494 NAIPQ13075 1403 aa16.62■□□□□ 0.25
LRTOMT-205ENST00000423494 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
LRTOMT-205ENST00000423494 ADRA2BP18089 450 aa16.62■□□□□ 0.25
LRTOMT-205ENST00000423494 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
LRTOMT-205ENST00000423494 QTRT2Q9H974 415 aaKnown RBP16.62■□□□□ 0.25
LRTOMT-205ENST00000423494 ADAMTS2O95450 1211 aa16.61■□□□□ 0.25
LRTOMT-205ENST00000423494 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
LRTOMT-205ENST00000423494 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
LRTOMT-205ENST00000423494 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
LRTOMT-205ENST00000423494 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
LRTOMT-205ENST00000423494 RPGRIP1LQ68CZ1 1315 aa16.6■□□□□ 0.25
LRTOMT-205ENST00000423494 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
LRTOMT-205ENST00000423494 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
LRTOMT-205ENST00000423494 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
LRTOMT-205ENST00000423494 PTCH1Q13635 1447 aa16.57■□□□□ 0.24
LRTOMT-205ENST00000423494 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
LRTOMT-205ENST00000423494 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
LRTOMT-205ENST00000423494 USP21Q9UK80 565 aa16.54■□□□□ 0.24
LRTOMT-205ENST00000423494 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
LRTOMT-205ENST00000423494 ESCO1Q5FWF5 840 aa16.53■□□□□ 0.24
LRTOMT-205ENST00000423494 PPLO60437 1756 aa16.52■□□□□ 0.24
LRTOMT-205ENST00000423494 RGL3Q3MIN7 710 aa16.52■□□□□ 0.24
LRTOMT-205ENST00000423494 RGS12O14924 1447 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms