RNA–Protein interactions for RNA: ENST00000423041.6

PAPD4-202, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAPD4, Length 3,223 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-202ENST00000423041 UQCRHP07919 91 aa11.88□□□□□ -0.51
PAPD4-202ENST00000423041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
PAPD4-202ENST00000423041 RGS22Q8NE09 1264 aa11.88□□□□□ -0.51
PAPD4-202ENST00000423041 E9PSI1 815 aa11.88□□□□□ -0.51
PAPD4-202ENST00000423041 RAPGEF3O95398 923 aa11.88□□□□□ -0.51
PAPD4-202ENST00000423041 MSNP26038 577 aaKnown RBP11.87□□□□□ -0.51
PAPD4-202ENST00000423041 BECN1Q14457 450 aa11.87□□□□□ -0.51
PAPD4-202ENST00000423041 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
PAPD4-202ENST00000423041 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PAPD4-202ENST00000423041 TONSLQ96HA7 1378 aa11.87□□□□□ -0.51
PAPD4-202ENST00000423041 ZBTB22O15209 634 aa11.86□□□□□ -0.51
PAPD4-202ENST00000423041 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
PAPD4-202ENST00000423041 DYNC1I1O14576 645 aa11.86□□□□□ -0.51
PAPD4-202ENST00000423041 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
PAPD4-202ENST00000423041 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
PAPD4-202ENST00000423041 BCCIPQ9P287 314 aaKnown RBP eCLIP11.86□□□□□ -0.51
PAPD4-202ENST00000423041 ABCC10Q5T3U5 1492 aa11.86□□□□□ -0.51
PAPD4-202ENST00000423041 CNTLNQ9NXG0 1405 aa11.85□□□□□ -0.51
PAPD4-202ENST00000423041 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
PAPD4-202ENST00000423041 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
PAPD4-202ENST00000423041 FANCAO15360 1455 aa11.85□□□□□ -0.51
PAPD4-202ENST00000423041 PLCH2O75038 1416 aa11.85□□□□□ -0.51
PAPD4-202ENST00000423041 SETD5Q9C0A6 1442 aa11.84□□□□□ -0.51
PAPD4-202ENST00000423041 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
PAPD4-202ENST00000423041 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
PAPD4-202ENST00000423041 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
PAPD4-202ENST00000423041 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.51
PAPD4-202ENST00000423041 TSPOAP1O95153 1857 aa11.83□□□□□ -0.51
PAPD4-202ENST00000423041 TRAK2O60296 914 aa11.83□□□□□ -0.52
PAPD4-202ENST00000423041 PTPN23Q9H3S7 1636 aa11.83□□□□□ -0.52
PAPD4-202ENST00000423041 MCM4P33991 863 aa11.83□□□□□ -0.52
PAPD4-202ENST00000423041 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
PAPD4-202ENST00000423041 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
PAPD4-202ENST00000423041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.524e-6■□□□□ 11.1
PAPD4-202ENST00000423041 SPAG9O60271 1321 aaKnown RBP11.82□□□□□ -0.52
PAPD4-202ENST00000423041 CBX1P83916 185 aa11.82□□□□□ -0.52
PAPD4-202ENST00000423041 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
PAPD4-202ENST00000423041 HOMEZQ8IX15 550 aa11.81□□□□□ -0.52
PAPD4-202ENST00000423041 ADGRL1O94910 1474 aa11.8□□□□□ -0.52
PAPD4-202ENST00000423041 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
PAPD4-202ENST00000423041 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
PAPD4-202ENST00000423041 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
PAPD4-202ENST00000423041 CDC42BPAQ5VT25 1732 aa11.79□□□□□ -0.52
PAPD4-202ENST00000423041 PTPRKQ15262 1439 aa11.79□□□□□ -0.52
PAPD4-202ENST00000423041 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
PAPD4-202ENST00000423041 ANTXR1Q9H6X2 564 aa11.79□□□□□ -0.52
PAPD4-202ENST00000423041 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 CNPY4Q8N129 248 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 ABCC5O15440 1437 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 DAPK1P53355 1430 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 TRAPPC8Q9Y2L5 1435 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 MYO5CQ9NQX4 1742 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 AEBP1Q8IUX7 1158 aa11.78□□□□□ -0.52
PAPD4-202ENST00000423041 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
PAPD4-202ENST00000423041 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
PAPD4-202ENST00000423041 CDC42BPBQ9Y5S2 1711 aa11.76□□□□□ -0.53
PAPD4-202ENST00000423041 MLECQ14165 292 aa11.76□□□□□ -0.53
PAPD4-202ENST00000423041 ANKRD30AQ9BXX3 1397 aa11.76□□□□□ -0.53
PAPD4-202ENST00000423041 DIP2BQ9P265 1576 aa11.76□□□□□ -0.53
PAPD4-202ENST00000423041 ABCA9Q8IUA7 1624 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 C9orf84Q5VXU9 1444 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 KCNJ4P48050 445 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 KCNG1Q9UIX4 513 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
PAPD4-202ENST00000423041 TULP1O00294 542 aaPredicted RBP11.74□□□□□ -0.53
PAPD4-202ENST00000423041 APPP05067 770 aa11.74□□□□□ -0.53
PAPD4-202ENST00000423041 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
PAPD4-202ENST00000423041 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
PAPD4-202ENST00000423041 XPCQ01831 940 aaPredicted RBP11.74□□□□□ -0.53
PAPD4-202ENST00000423041 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
PAPD4-202ENST00000423041 CRBNQ96SW2 442 aa11.74□□□□□ -0.53
PAPD4-202ENST00000423041 CCDC141Q6ZP82 1450 aa11.74□□□□□ -0.53
PAPD4-202ENST00000423041 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 GGT6Q6P531 493 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 CENPQQ7L2Z9 268 aaPredicted RBP11.73□□□□□ -0.53
PAPD4-202ENST00000423041 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
PAPD4-202ENST00000423041 PLEKHH2Q8IVE3 1493 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 KIF15Q9NS87 1388 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 CLGNO14967 610 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 KIF3BO15066 747 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 PPP1R9BQ96SB3 815 aa11.73□□□□□ -0.53
PAPD4-202ENST00000423041 TCOF1Q13428 1488 aaKnown RBP11.73□□□□□ -0.53
PAPD4-202ENST00000423041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
PAPD4-202ENST00000423041 SLC20A2Q08357 652 aa11.72□□□□□ -0.53
PAPD4-202ENST00000423041 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
PAPD4-202ENST00000423041 PLIN1O60240 522 aa11.72□□□□□ -0.53
PAPD4-202ENST00000423041 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
PAPD4-202ENST00000423041 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
PAPD4-202ENST00000423041 IGSF3O75054 1194 aa11.71□□□□□ -0.53
PAPD4-202ENST00000423041 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.53
PAPD4-202ENST00000423041 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
PAPD4-202ENST00000423041 ZNF500O60304 480 aaPredicted RBP11.71□□□□□ -0.54
PAPD4-202ENST00000423041 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
PAPD4-202ENST00000423041 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
PAPD4-202ENST00000423041 KIAA1107Q9UPP5 1409 aa11.7□□□□□ -0.54
PAPD4-202ENST00000423041 MMP14P50281 582 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms