RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 PPLO60437 1756 aa12.8□□□□□ -0.36
HPS4-204ENST00000422379 NRXN1Q9ULB1 1477 aa12.8□□□□□ -0.36
HPS4-204ENST00000422379 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
HPS4-204ENST00000422379 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
HPS4-204ENST00000422379 MYOM2P54296 1465 aa12.8□□□□□ -0.36
HPS4-204ENST00000422379 UBR1Q8IWV7 1749 aa12.79□□□□□ -0.36
HPS4-204ENST00000422379 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
HPS4-204ENST00000422379 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
HPS4-204ENST00000422379 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
HPS4-204ENST00000422379 TRPM1Q7Z4N2 1603 aa12.78□□□□□ -0.36
HPS4-204ENST00000422379 ZFYVE9O95405 1425 aa12.78□□□□□ -0.36
HPS4-204ENST00000422379 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
HPS4-204ENST00000422379 PIK3C2GO75747 1445 aa12.77□□□□□ -0.37
HPS4-204ENST00000422379 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
HPS4-204ENST00000422379 RIMS2Q9UQ26 1411 aa12.75□□□□□ -0.37
HPS4-204ENST00000422379 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
HPS4-204ENST00000422379 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
HPS4-204ENST00000422379 KDM5AP29375 1690 aaKnown RBP12.75□□□□□ -0.37
HPS4-204ENST00000422379 CEP170BQ9Y4F5 1589 aaPredicted RBP12.75□□□□□ -0.37
HPS4-204ENST00000422379 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
HPS4-204ENST00000422379 DIEXFQ68CQ4 756 aaKnown RBP12.74□□□□□ -0.37
HPS4-204ENST00000422379 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
HPS4-204ENST00000422379 LTKP29376 864 aa12.73□□□□□ -0.37
HPS4-204ENST00000422379 ROCK2O75116 1388 aaKnown RBP12.73□□□□□ -0.37
HPS4-204ENST00000422379 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
HPS4-204ENST00000422379 ARHGAP23Q9P227 1491 aa12.72□□□□□ -0.37
HPS4-204ENST00000422379 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
HPS4-204ENST00000422379 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.37
HPS4-204ENST00000422379 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.37
HPS4-204ENST00000422379 ZNF142P52746 1687 aaPredicted RBP12.71□□□□□ -0.37
HPS4-204ENST00000422379 SLIT1O75093 1534 aa12.71□□□□□ -0.37
HPS4-204ENST00000422379 ADGRB1O14514 1584 aa12.71□□□□□ -0.38
HPS4-204ENST00000422379 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.38
HPS4-204ENST00000422379 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
HPS4-204ENST00000422379 C14orf93Q9H972 538 aaKnown RBP12.7□□□□□ -0.38
HPS4-204ENST00000422379 USP47Q96K76 1375 aa12.7□□□□□ -0.38
HPS4-204ENST00000422379 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
HPS4-204ENST00000422379 KIAA1210Q9ULL0 1709 aa12.69□□□□□ -0.38
HPS4-204ENST00000422379 LAMC1P11047 1609 aa12.68□□□□□ -0.38
HPS4-204ENST00000422379 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
HPS4-204ENST00000422379 ALKQ9UM73 1620 aa12.68□□□□□ -0.38
HPS4-204ENST00000422379 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
HPS4-204ENST00000422379 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
HPS4-204ENST00000422379 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
HPS4-204ENST00000422379 IQGAP1P46940 1657 aa12.66□□□□□ -0.38
HPS4-204ENST00000422379 THEMISQ8N1K5 641 aaPredicted RBP12.66□□□□□ -0.38
HPS4-204ENST00000422379 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
HPS4-204ENST00000422379 ADAMTS13Q76LX8 1427 aa12.66□□□□□ -0.38
HPS4-204ENST00000422379 TXNDC2Q86VQ3 553 aa12.66□□□□□ -0.38
HPS4-204ENST00000422379 ST20-MTHFSA0A0A6YYL1 179 aa12.65□□□□□ -0.38
HPS4-204ENST00000422379 METP08581 1390 aa12.65□□□□□ -0.39
HPS4-204ENST00000422379 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
HPS4-204ENST00000422379 SCAF11Q99590 1463 aaKnown RBP12.64□□□□□ -0.39
HPS4-204ENST00000422379 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
HPS4-204ENST00000422379 MED14O60244 1454 aa12.64□□□□□ -0.39
HPS4-204ENST00000422379 LMTK3Q96Q04 1460 aa12.62□□□□□ -0.39
HPS4-204ENST00000422379 TESK2Q96S53 571 aa12.62□□□□□ -0.39
HPS4-204ENST00000422379 HSPA2P54652 639 aa12.62□□□□□ -0.39
HPS4-204ENST00000422379 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
HPS4-204ENST00000422379 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
HPS4-204ENST00000422379 TRAK1Q9UPV9 953 aa12.61□□□□□ -0.39
HPS4-204ENST00000422379 EID1Q9Y6B2 187 aa12.6□□□□□ -0.39
HPS4-204ENST00000422379 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
HPS4-204ENST00000422379 STK26Q9P289 416 aa12.6□□□□□ -0.39
HPS4-204ENST00000422379 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
HPS4-204ENST00000422379 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
HPS4-204ENST00000422379 HDGFP51858 240 aaKnown RBP12.58□□□□□ -0.39
HPS4-204ENST00000422379 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.39
HPS4-204ENST00000422379 KIF7Q2M1P5 1343 aa12.58□□□□□ -0.4
HPS4-204ENST00000422379 ANKLE2Q86XL3 938 aa12.58□□□□□ -0.4
HPS4-204ENST00000422379 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
HPS4-204ENST00000422379 CCDC7Q96M83 1385 aa12.57□□□□□ -0.4
HPS4-204ENST00000422379 BCANQ96GW7 911 aa12.57□□□□□ -0.4
HPS4-204ENST00000422379 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
HPS4-204ENST00000422379 PLEKHH1Q9ULM0 1364 aa12.57□□□□□ -0.4
HPS4-204ENST00000422379 TBX22Q9Y458 520 aa12.55□□□□□ -0.4
HPS4-204ENST00000422379 POLR1AO95602 1720 aaPredicted RBP12.55□□□□□ -0.4
HPS4-204ENST00000422379 NPHP4O75161 1426 aaPredicted RBP12.55□□□□□ -0.4
HPS4-204ENST00000422379 WAPLQ7Z5K2 1190 aa12.54□□□□□ -0.4
HPS4-204ENST00000422379 ABCC11Q96J66 1382 aa12.54□□□□□ -0.4
HPS4-204ENST00000422379 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
HPS4-204ENST00000422379 TECPR2O15040 1411 aa12.54□□□□□ -0.4
HPS4-204ENST00000422379 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
HPS4-204ENST00000422379 PRAM1Q96QH2 718 aa12.54□□□□□ -0.4
HPS4-204ENST00000422379 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
HPS4-204ENST00000422379 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
HPS4-204ENST00000422379 DDX10Q13206 875 aaKnown RBP12.53□□□□□ -0.4
HPS4-204ENST00000422379 DIP2AQ14689 1571 aa12.53□□□□□ -0.4
HPS4-204ENST00000422379 EIF3AQ14152 1382 aaKnown RBP12.53□□□□□ -0.4
HPS4-204ENST00000422379 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
HPS4-204ENST00000422379 MIER1Q8N108 512 aa12.52□□□□□ -0.4
HPS4-204ENST00000422379 STRCQ7RTU9 1775 aa12.52□□□□□ -0.4
HPS4-204ENST00000422379 CPS1P31327 1500 aa12.51□□□□□ -0.41
HPS4-204ENST00000422379 TULP4Q9NRJ4 1543 aa12.51□□□□□ -0.41
HPS4-204ENST00000422379 KNDC1Q76NI1 1749 aa12.51□□□□□ -0.41
HPS4-204ENST00000422379 XRN1Q8IZH2 1706 aaKnown RBP12.51□□□□□ -0.41
HPS4-204ENST00000422379 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
HPS4-204ENST00000422379 AMOTL2Q9Y2J4 779 aa12.5□□□□□ -0.41
HPS4-204ENST00000422379 KCNA6P17658 529 aa12.49□□□□□ -0.41
HPS4-204ENST00000422379 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms