RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 MEX3CQ5U5Q3 659 aaKnown RBP10.6□□□□□ -0.71
PMS1-208ENST00000421722 SLC52A1Q9NWF4 448 aa10.6□□□□□ -0.71
PMS1-208ENST00000421722 PLEKHG1Q9ULL1 1385 aa10.6□□□□□ -0.71
PMS1-208ENST00000421722 RXRBP28702 533 aa10.6□□□□□ -0.71
PMS1-208ENST00000421722 HDGFP51858 240 aaKnown RBP10.6□□□□□ -0.71
PMS1-208ENST00000421722 IDI1Q13907 227 aa10.6□□□□□ -0.71
PMS1-208ENST00000421722 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
PMS1-208ENST00000421722 SLC26A8Q96RN1 970 aa10.59□□□□□ -0.71
PMS1-208ENST00000421722 DIP2AQ14689 1571 aa10.58□□□□□ -0.72
PMS1-208ENST00000421722 PIK3R4Q99570 1358 aa10.58□□□□□ -0.72
PMS1-208ENST00000421722 TBX22Q9Y458 520 aa10.58□□□□□ -0.72
PMS1-208ENST00000421722 ZFYVE9O95405 1425 aa10.57□□□□□ -0.72
PMS1-208ENST00000421722 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
PMS1-208ENST00000421722 RPRD2Q5VT52 1461 aaKnown RBP10.57□□□□□ -0.72
PMS1-208ENST00000421722 ABCC5O15440 1437 aa10.57□□□□□ -0.72
PMS1-208ENST00000421722 CADPS2Q86UW7 1296 aa10.56□□□□□ -0.72
PMS1-208ENST00000421722 FOXD1Q16676 465 aa10.56□□□□□ -0.72
PMS1-208ENST00000421722 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.55□□□□□ -0.72
PMS1-208ENST00000421722 RIMS2Q9UQ26 1411 aa10.55□□□□□ -0.72
PMS1-208ENST00000421722 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.54□□□□□ -0.72
PMS1-208ENST00000421722 RBM33Q96EV2 1170 aaKnown RBP10.54□□□□□ -0.72
PMS1-208ENST00000421722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.54□□□□□ -0.724e-6■■□□□ 13.1
PMS1-208ENST00000421722 C19orf44Q9H6X5 657 aa10.54□□□□□ -0.72
PMS1-208ENST00000421722 BCANQ96GW7 911 aa10.54□□□□□ -0.72
PMS1-208ENST00000421722 DCCP43146 1447 aa10.54□□□□□ -0.72
PMS1-208ENST00000421722 SETD5Q9C0A6 1442 aa10.54□□□□□ -0.72
PMS1-208ENST00000421722 ATF3P18847 181 aa10.53□□□□□ -0.72
PMS1-208ENST00000421722 RRP7BPQ9NSQ0 103 aa10.53□□□□□ -0.72
PMS1-208ENST00000421722 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
PMS1-208ENST00000421722 ANKRD30AQ9BXX3 1397 aa10.53□□□□□ -0.72
PMS1-208ENST00000421722 DAPK1P53355 1430 aa10.53□□□□□ -0.72
PMS1-208ENST00000421722 TMEM131LA2VDJ0 1609 aa10.52□□□□□ -0.73
PMS1-208ENST00000421722 PTPN23Q9H3S7 1636 aa10.52□□□□□ -0.73
PMS1-208ENST00000421722 RBM6P78332 1123 aaKnown RBP10.51□□□□□ -0.73
PMS1-208ENST00000421722 AFF2P51816 1311 aa10.51□□□□□ -0.73
PMS1-208ENST00000421722 TRPM2O94759 1503 aa10.51□□□□□ -0.73
PMS1-208ENST00000421722 NHSL1Q5SYE7 1610 aa10.51□□□□□ -0.73
PMS1-208ENST00000421722 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
PMS1-208ENST00000421722 PPP1R15AO75807 674 aaPredicted RBP10.5□□□□□ -0.73
PMS1-208ENST00000421722 RGS12O14924 1447 aa10.5□□□□□ -0.73
PMS1-208ENST00000421722 ADAMTS13Q76LX8 1427 aa10.5□□□□□ -0.73
PMS1-208ENST00000421722 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
PMS1-208ENST00000421722 ADGRL2O95490 1459 aa10.49□□□□□ -0.73
PMS1-208ENST00000421722 BRINP3Q76B58 766 aa10.49□□□□□ -0.73
PMS1-208ENST00000421722 ATAD2Q6PL18 1390 aa10.49□□□□□ -0.73
PMS1-208ENST00000421722 ASXL1Q8IXJ9 1541 aa10.49□□□□□ -0.73
PMS1-208ENST00000421722 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
PMS1-208ENST00000421722 LRRC59Q96AG4 307 aaKnown RBP10.48□□□□□ -0.73
PMS1-208ENST00000421722 QTRT2Q9H974 415 aaKnown RBP10.47□□□□□ -0.73
PMS1-208ENST00000421722 NUTM2BA6NNL0 878 aaPredicted RBP10.47□□□□□ -0.73
PMS1-208ENST00000421722 NUTM2EB1AL46 878 aaPredicted RBP10.47□□□□□ -0.73
PMS1-208ENST00000421722 KANK4Q5T7N3 995 aaPredicted RBP10.47□□□□□ -0.73
PMS1-208ENST00000421722 NUTM2AQ8IVF1 878 aaPredicted RBP10.47□□□□□ -0.73
PMS1-208ENST00000421722 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
PMS1-208ENST00000421722 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.74
PMS1-208ENST00000421722 XRN1Q8IZH2 1706 aaKnown RBP10.46□□□□□ -0.74
PMS1-208ENST00000421722 MST1RQ04912 1400 aa10.46□□□□□ -0.74
PMS1-208ENST00000421722 UNC13BO14795 1591 aa10.45□□□□□ -0.74
PMS1-208ENST00000421722 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
PMS1-208ENST00000421722 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
PMS1-208ENST00000421722 LAMC1P11047 1609 aa10.45□□□□□ -0.74
PMS1-208ENST00000421722 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
PMS1-208ENST00000421722 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
PMS1-208ENST00000421722 NUTM2DQ5VT03 806 aaPredicted RBP10.44□□□□□ -0.74
PMS1-208ENST00000421722 PTCH1Q13635 1447 aa10.44□□□□□ -0.74
PMS1-208ENST00000421722 SETBP1Q9Y6X0 1596 aa10.43□□□□□ -0.74
PMS1-208ENST00000421722 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
PMS1-208ENST00000421722 ANKRD50Q9ULJ7 1429 aa10.42□□□□□ -0.74
PMS1-208ENST00000421722 TRPC5Q9UL62 973 aaPredicted RBP10.41□□□□□ -0.74
PMS1-208ENST00000421722 ATRNO75882 1429 aa10.41□□□□□ -0.74
PMS1-208ENST00000421722 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
PMS1-208ENST00000421722 IQGAP3Q86VI3 1631 aa10.4□□□□□ -0.74
PMS1-208ENST00000421722 FNBP4Q8N3X1 1017 aaPredicted RBP10.4□□□□□ -0.75
PMS1-208ENST00000421722 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.75
PMS1-208ENST00000421722 E9PCH4 1651 aa10.39□□□□□ -0.75
PMS1-208ENST00000421722 COL22A1Q8NFW1 1626 aaPredicted RBP10.39□□□□□ -0.75
PMS1-208ENST00000421722 NRXN3Q9Y4C0 1643 aa10.39□□□□□ -0.75
PMS1-208ENST00000421722 CHGAP10645 457 aaKnown RBP10.39□□□□□ -0.75
PMS1-208ENST00000421722 USP21Q9UK80 565 aa10.38□□□□□ -0.75
PMS1-208ENST00000421722 SOS2Q07890 1332 aaPredicted RBP10.37□□□□□ -0.75
PMS1-208ENST00000421722 APLP2Q06481 763 aa10.37□□□□□ -0.75
PMS1-208ENST00000421722 C1orf167Q5SNV9 1468 aa10.37□□□□□ -0.75
PMS1-208ENST00000421722 LRP5O75197 1615 aa10.36□□□□□ -0.75
PMS1-208ENST00000421722 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
PMS1-208ENST00000421722 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
PMS1-208ENST00000421722 ROCK1Q13464 1354 aa10.34□□□□□ -0.75
PMS1-208ENST00000421722 ADAMTS2O95450 1211 aa10.34□□□□□ -0.75
PMS1-208ENST00000421722 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.34□□□□□ -0.75
PMS1-208ENST00000421722 METP08581 1390 aa10.33□□□□□ -0.76
PMS1-208ENST00000421722 MARF1Q9Y4F3 1742 aaKnown RBP10.33□□□□□ -0.76
PMS1-208ENST00000421722 BLMP54132 1417 aaPredicted RBP10.33□□□□□ -0.76
PMS1-208ENST00000421722 MYOM2P54296 1465 aa10.33□□□□□ -0.76
PMS1-208ENST00000421722 SPHKAPQ2M3C7 1700 aa10.32□□□□□ -0.76
PMS1-208ENST00000421722 DDX17Q92841 729 aaKnown RBP10.31□□□□□ -0.76
PMS1-208ENST00000421722 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
PMS1-208ENST00000421722 GJD4Q96KN9 370 aaPredicted RBP10.3□□□□□ -0.76
PMS1-208ENST00000421722 NEXMIFQ5QGS0 1516 aa10.29□□□□□ -0.76
PMS1-208ENST00000421722 HFM1A2PYH4 1435 aa10.29□□□□□ -0.76
PMS1-208ENST00000421722 NPHP3Q7Z494 1330 aa10.28□□□□□ -0.76
PMS1-208ENST00000421722 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms