RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 RPGRIP1LQ68CZ1 1315 aa25.4■■□□□ 1.66
LINC00271-201ENST00000421378 EID1Q9Y6B2 187 aa25.39■■□□□ 1.66
LINC00271-201ENST00000421378 SCAF11Q99590 1463 aaKnown RBP25.39■■□□□ 1.66
LINC00271-201ENST00000421378 PPLO60437 1756 aa25.39■■□□□ 1.66
LINC00271-201ENST00000421378 POLR1AO95602 1720 aaPredicted RBP25.39■■□□□ 1.65
LINC00271-201ENST00000421378 IFT172Q9UG01 1749 aa25.39■■□□□ 1.65
LINC00271-201ENST00000421378 HDGFP51858 240 aaKnown RBP25.39■■□□□ 1.65
LINC00271-201ENST00000421378 ANKLE2Q86XL3 938 aa25.39■■□□□ 1.65
LINC00271-201ENST00000421378 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.38■■□□□ 1.65
LINC00271-201ENST00000421378 TXNDC2Q86VQ3 553 aa25.37■■□□□ 1.65
LINC00271-201ENST00000421378 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
LINC00271-201ENST00000421378 PPP1R15AO75807 674 aaPredicted RBP25.36■■□□□ 1.65
LINC00271-201ENST00000421378 LTKP29376 864 aa25.36■■□□□ 1.65
LINC00271-201ENST00000421378 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
LINC00271-201ENST00000421378 DCAF11Q8TEB1 546 aa25.33■■□□□ 1.65
LINC00271-201ENST00000421378 STRCQ7RTU9 1775 aa25.33■■□□□ 1.65
LINC00271-201ENST00000421378 NCKAP5LQ9HCH0 1330 aa25.32■■□□□ 1.64
LINC00271-201ENST00000421378 MYOM2P54296 1465 aa25.32■■□□□ 1.64
LINC00271-201ENST00000421378 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
LINC00271-201ENST00000421378 L3MBTL2Q969R5 705 aa25.31■■□□□ 1.64
LINC00271-201ENST00000421378 MED14O60244 1454 aa25.3■■□□□ 1.64
LINC00271-201ENST00000421378 PLEKHG1Q9ULL1 1385 aa25.29■■□□□ 1.64
LINC00271-201ENST00000421378 IQGAP1P46940 1657 aa25.28■■□□□ 1.64
LINC00271-201ENST00000421378 STAC3Q96MF2 364 aa25.28■■□□□ 1.64
LINC00271-201ENST00000421378 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
LINC00271-201ENST00000421378 NPHP4O75161 1426 aaPredicted RBP25.28■■□□□ 1.64
LINC00271-201ENST00000421378 ADGRF5Q8IZF2 1346 aa25.26■■□□□ 1.63
LINC00271-201ENST00000421378 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
LINC00271-201ENST00000421378 TIMELESSQ9UNS1 1208 aa25.26■■□□□ 1.63
LINC00271-201ENST00000421378 SETBP1Q9Y6X0 1596 aa25.24■■□□□ 1.63
LINC00271-201ENST00000421378 PIK3C2GO75747 1445 aa25.24■■□□□ 1.63
LINC00271-201ENST00000421378 BCANQ96GW7 911 aa25.24■■□□□ 1.63
LINC00271-201ENST00000421378 SENP3Q9H4L4 574 aaPredicted RBP25.24■■□□□ 1.63
LINC00271-201ENST00000421378 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
LINC00271-201ENST00000421378 DMRT2Q9Y5R5 561 aa25.2■■□□□ 1.62
LINC00271-201ENST00000421378 PRAG1Q86YV5 1406 aa25.2■■□□□ 1.62
LINC00271-201ENST00000421378 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
LINC00271-201ENST00000421378 ADAMTS13Q76LX8 1427 aa25.18■■□□□ 1.62
LINC00271-201ENST00000421378 SLC26A8Q96RN1 970 aa25.17■■□□□ 1.62
LINC00271-201ENST00000421378 LAMC1P11047 1609 aa25.17■■□□□ 1.62
LINC00271-201ENST00000421378 ALKQ9UM73 1620 aa25.16■■□□□ 1.62
LINC00271-201ENST00000421378 SETD1AO15047 1707 aaKnown RBP25.14■■□□□ 1.61
LINC00271-201ENST00000421378 TBX22Q9Y458 520 aa25.13■■□□□ 1.61
LINC00271-201ENST00000421378 C14orf93Q9H972 538 aaKnown RBP25.11■■□□□ 1.61
LINC00271-201ENST00000421378 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
LINC00271-201ENST00000421378 KIAA1210Q9ULL0 1709 aa25.1■■□□□ 1.61
LINC00271-201ENST00000421378 NBPF8Q3BBV2 869 aa25.09■■□□□ 1.61
LINC00271-201ENST00000421378 TRPM1Q7Z4N2 1603 aa25.08■■□□□ 1.61
LINC00271-201ENST00000421378 METP08581 1390 aa25.08■■□□□ 1.61
LINC00271-201ENST00000421378 PIK3R4Q99570 1358 aa25.06■■□□□ 1.6
LINC00271-201ENST00000421378 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
LINC00271-201ENST00000421378 ADGRB1O14514 1584 aa25.05■■□□□ 1.6
LINC00271-201ENST00000421378 RALGAPBQ86X10 1494 aa25.03■■□□□ 1.6
LINC00271-201ENST00000421378 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
LINC00271-201ENST00000421378 CHD2O14647 1828 aaKnown RBP25.02■■□□□ 1.6
LINC00271-201ENST00000421378 ROCK2O75116 1388 aaKnown RBP25.02■■□□□ 1.6
LINC00271-201ENST00000421378 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
LINC00271-201ENST00000421378 NBPF1Q3BBV0 1214 aa25.01■■□□□ 1.59
LINC00271-201ENST00000421378 PTPRUQ92729 1446 aa25■■□□□ 1.59
LINC00271-201ENST00000421378 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
LINC00271-201ENST00000421378 YTHDC2Q9H6S0 1430 aaKnown RBP24.99■■□□□ 1.59
LINC00271-201ENST00000421378 XRN1Q8IZH2 1706 aaKnown RBP24.99■■□□□ 1.59
LINC00271-201ENST00000421378 KCNA6P17658 529 aa24.97■■□□□ 1.59
LINC00271-201ENST00000421378 LRPPRCP42704 1394 aaKnown RBP24.97■■□□□ 1.59
LINC00271-201ENST00000421378 AMOTL2Q9Y2J4 779 aa24.97■■□□□ 1.59
LINC00271-201ENST00000421378 STRCP1A6NGW2 1772 aa24.96■■□□□ 1.59
LINC00271-201ENST00000421378 GPRASP1Q5JY77 1395 aa24.96■■□□□ 1.59
LINC00271-201ENST00000421378 NKTRP30414 1462 aaKnown RBP24.95■■□□□ 1.59
LINC00271-201ENST00000421378 KNDC1Q76NI1 1749 aa24.95■■□□□ 1.58
LINC00271-201ENST00000421378 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.58
LINC00271-201ENST00000421378 STK26Q9P289 416 aa24.94■■□□□ 1.58
LINC00271-201ENST00000421378 TECPR2O15040 1411 aa24.94■■□□□ 1.58
LINC00271-201ENST00000421378 ABCC11Q96J66 1382 aa24.93■■□□□ 1.58
LINC00271-201ENST00000421378 PTCH1Q13635 1447 aa24.92■■□□□ 1.58
LINC00271-201ENST00000421378 CPS1P31327 1500 aa24.92■■□□□ 1.58
LINC00271-201ENST00000421378 CARD11Q9BXL7 1154 aa24.92■■□□□ 1.58
LINC00271-201ENST00000421378 TRAK1Q9UPV9 953 aa24.9■■□□□ 1.58
LINC00271-201ENST00000421378 DLC1Q96QB1 1528 aa24.89■■□□□ 1.58
LINC00271-201ENST00000421378 LTBP4Q8N2S1 1624 aa24.89■■□□□ 1.58
LINC00271-201ENST00000421378 ROBO2Q9HCK4 1378 aa24.88■■□□□ 1.57
LINC00271-201ENST00000421378 ARHGEF28Q8N1W1 1705 aaKnown RBP24.88■■□□□ 1.57
LINC00271-201ENST00000421378 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
LINC00271-201ENST00000421378 EIF3AQ14152 1382 aaKnown RBP24.85■■□□□ 1.57
LINC00271-201ENST00000421378 LRRC7Q96NW7 1537 aa24.85■■□□□ 1.57
LINC00271-201ENST00000421378 PROSER2Q86WR7 435 aaPredicted RBP24.84■■□□□ 1.57
LINC00271-201ENST00000421378 SIRT1Q96EB6 747 aa24.83■■□□□ 1.57
LINC00271-201ENST00000421378 PRAM1Q96QH2 718 aa24.82■■□□□ 1.56
LINC00271-201ENST00000421378 TMEM94Q12767 1356 aa24.82■■□□□ 1.56
LINC00271-201ENST00000421378 PLEKHH1Q9ULM0 1364 aa24.81■■□□□ 1.56
LINC00271-201ENST00000421378 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
LINC00271-201ENST00000421378 RBM33Q96EV2 1170 aaKnown RBP24.8■■□□□ 1.56
LINC00271-201ENST00000421378 POGKQ9P215 609 aa24.8■■□□□ 1.56
LINC00271-201ENST00000421378 USP47Q96K76 1375 aa24.8■■□□□ 1.56
LINC00271-201ENST00000421378 NCOA3Q9Y6Q9 1424 aa24.78■■□□□ 1.56
LINC00271-201ENST00000421378 XIRP1Q702N8 1843 aaKnown RBP24.78■■□□□ 1.56
LINC00271-201ENST00000421378 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
LINC00271-201ENST00000421378 CENPJQ9HC77 1338 aaPredicted RBP24.77■■□□□ 1.56
LINC00271-201ENST00000421378 NALCNQ8IZF0 1738 aa24.76■■□□□ 1.55
LINC00271-201ENST00000421378 C14orf37Q86TY3 774 aa24.76■■□□□ 1.55
LINC00271-201ENST00000421378 QRICH2Q9H0J4 1663 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms