RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 NEXMIFQ5QGS0 1516 aa30.69■■■□□ 2.5
ABCF3-202ENST00000421340 THEMISQ8N1K5 641 aaPredicted RBP30.69■■■□□ 2.5
ABCF3-202ENST00000421340 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.69■■■□□ 2.5
ABCF3-202ENST00000421340 IFT172Q9UG01 1749 aa30.67■■■□□ 2.5
ABCF3-202ENST00000421340 SETD1BQ9UPS6 1966 aaKnown RBP30.67■■■□□ 2.5
ABCF3-202ENST00000421340 MYO3AQ8NEV4 1616 aa30.67■■■□□ 2.5
ABCF3-202ENST00000421340 UBR1Q8IWV7 1749 aa30.66■■■□□ 2.5
ABCF3-202ENST00000421340 TMEM2Q9UHN6 1383 aa30.66■■■□□ 2.5
ABCF3-202ENST00000421340 PPLO60437 1756 aa30.65■■■□□ 2.5
ABCF3-202ENST00000421340 ADGRF5Q8IZF2 1346 aa30.65■■■□□ 2.5
ABCF3-202ENST00000421340 RIMS2Q9UQ26 1411 aa30.64■■■□□ 2.5
ABCF3-202ENST00000421340 CEP170BQ9Y4F5 1589 aaPredicted RBP30.62■■■□□ 2.49
ABCF3-202ENST00000421340 RALGAPBQ86X10 1494 aa30.62■■■□□ 2.49
ABCF3-202ENST00000421340 MYO5BQ9ULV0 1848 aa30.59■■■□□ 2.49
ABCF3-202ENST00000421340 SLIT1O75093 1534 aa30.59■■■□□ 2.49
ABCF3-202ENST00000421340 ARHGAP23Q9P227 1491 aa30.59■■■□□ 2.49
ABCF3-202ENST00000421340 PIK3C2GO75747 1445 aa30.58■■■□□ 2.49
ABCF3-202ENST00000421340 ZNF142P52746 1687 aaPredicted RBP30.58■■■□□ 2.49
ABCF3-202ENST00000421340 GPRASP1Q5JY77 1395 aa30.56■■■□□ 2.48
ABCF3-202ENST00000421340 C14orf93Q9H972 538 aaKnown RBP30.56■■■□□ 2.48
ABCF3-202ENST00000421340 EID1Q9Y6B2 187 aa30.55■■■□□ 2.48
ABCF3-202ENST00000421340 NUTM2DQ5VT03 806 aaPredicted RBP30.53■■■□□ 2.48
ABCF3-202ENST00000421340 TRPM1Q7Z4N2 1603 aa30.53■■■□□ 2.48
ABCF3-202ENST00000421340 KIAA1210Q9ULL0 1709 aa30.52■■■□□ 2.48
ABCF3-202ENST00000421340 ROCK2O75116 1388 aaKnown RBP30.52■■■□□ 2.48
ABCF3-202ENST00000421340 TXNDC2Q86VQ3 553 aa30.51■■■□□ 2.47
ABCF3-202ENST00000421340 CFAP70Q5T0N1 1121 aa30.5■■■□□ 2.47
ABCF3-202ENST00000421340 NBPF1Q3BBV0 1214 aa30.49■■■□□ 2.47
ABCF3-202ENST00000421340 CARD11Q9BXL7 1154 aa30.49■■■□□ 2.47
ABCF3-202ENST00000421340 LTKP29376 864 aa30.48■■■□□ 2.47
ABCF3-202ENST00000421340 PLEKHG1Q9ULL1 1385 aa30.46■■■□□ 2.47
ABCF3-202ENST00000421340 EIF4G2P78344 907 aaKnown RBP eCLIP30.46■■■□□ 2.47
ABCF3-202ENST00000421340 ANKLE2Q86XL3 938 aa30.45■■■□□ 2.47
ABCF3-202ENST00000421340 LAMC1P11047 1609 aa30.44■■■□□ 2.46
ABCF3-202ENST00000421340 SETBP1Q9Y6X0 1596 aa30.43■■■□□ 2.46
ABCF3-202ENST00000421340 SCAF11Q99590 1463 aaKnown RBP30.43■■■□□ 2.46
ABCF3-202ENST00000421340 ZNF316A6NFI3 1004 aaPredicted RBP30.38■■■□□ 2.45
ABCF3-202ENST00000421340 ALKQ9UM73 1620 aa30.37■■■□□ 2.45
ABCF3-202ENST00000421340 USP47Q96K76 1375 aa30.37■■■□□ 2.45
ABCF3-202ENST00000421340 ADGRB1O14514 1584 aa30.37■■■□□ 2.45
ABCF3-202ENST00000421340 HSPA5P11021 654 aaKnown RBP30.36■■■□□ 2.45
ABCF3-202ENST00000421340 TBX22Q9Y458 520 aa30.33■■■□□ 2.45
ABCF3-202ENST00000421340 MED14O60244 1454 aa30.32■■■□□ 2.44
ABCF3-202ENST00000421340 ADAMTS13Q76LX8 1427 aa30.32■■■□□ 2.44
ABCF3-202ENST00000421340 BCANQ96GW7 911 aa30.32■■■□□ 2.44
ABCF3-202ENST00000421340 NRXN3Q9Y4C0 1643 aa30.32■■■□□ 2.44
ABCF3-202ENST00000421340 LMTK3Q96Q04 1460 aa30.31■■■□□ 2.44
ABCF3-202ENST00000421340 TMEM132EQ6IEE7 984 aa30.3■■■□□ 2.44
ABCF3-202ENST00000421340 EIF3AQ14152 1382 aaKnown RBP30.28■■■□□ 2.44
ABCF3-202ENST00000421340 DIP2AQ14689 1571 aa30.26■■■□□ 2.43
ABCF3-202ENST00000421340 ASXL1Q8IXJ9 1541 aa30.26■■■□□ 2.43
ABCF3-202ENST00000421340 ST20-MTHFSA0A0A6YYL1 179 aa30.25■■■□□ 2.43
ABCF3-202ENST00000421340 LRPPRCP42704 1394 aaKnown RBP30.25■■■□□ 2.43
ABCF3-202ENST00000421340 IQGAP1P46940 1657 aa30.24■■■□□ 2.43
ABCF3-202ENST00000421340 YTHDC2Q9H6S0 1430 aaKnown RBP30.24■■■□□ 2.43
ABCF3-202ENST00000421340 SETD1AO15047 1707 aaKnown RBP30.24■■■□□ 2.43
ABCF3-202ENST00000421340 NPHP4O75161 1426 aaPredicted RBP30.23■■■□□ 2.43
ABCF3-202ENST00000421340 SLC24A1O60721 1099 aa30.23■■■□□ 2.43
ABCF3-202ENST00000421340 METP08581 1390 aa30.23■■■□□ 2.43
ABCF3-202ENST00000421340 ABCC11Q96J66 1382 aa30.23■■■□□ 2.43
ABCF3-202ENST00000421340 NCKAP5LQ9HCH0 1330 aa30.22■■■□□ 2.43
ABCF3-202ENST00000421340 SIRT1Q96EB6 747 aa30.22■■■□□ 2.43
ABCF3-202ENST00000421340 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
ABCF3-202ENST00000421340 PIK3R4Q99570 1358 aa30.22■■■□□ 2.43
ABCF3-202ENST00000421340 SLC26A8Q96RN1 970 aa30.21■■■□□ 2.43
ABCF3-202ENST00000421340 HIRIP3Q9BW71 556 aaPredicted RBP30.2■■■□□ 2.43
ABCF3-202ENST00000421340 TRAK1Q9UPV9 953 aa30.2■■■□□ 2.43
ABCF3-202ENST00000421340 HSPA2P54652 639 aa30.19■■■□□ 2.42
ABCF3-202ENST00000421340 DLC1Q96QB1 1528 aa30.17■■■□□ 2.42
ABCF3-202ENST00000421340 POLR1AO95602 1720 aaPredicted RBP30.16■■■□□ 2.42
ABCF3-202ENST00000421340 TESK2Q96S53 571 aa30.16■■■□□ 2.42
ABCF3-202ENST00000421340 TECPR2O15040 1411 aa30.15■■■□□ 2.42
ABCF3-202ENST00000421340 STK26Q9P289 416 aa30.14■■■□□ 2.42
ABCF3-202ENST00000421340 CENPJQ9HC77 1338 aaPredicted RBP30.14■■■□□ 2.42
ABCF3-202ENST00000421340 SBNO2Q9Y2G9 1366 aa30.14■■■□□ 2.41
ABCF3-202ENST00000421340 FAM135BQ49AJ0 1406 aa30.11■■■□□ 2.41
ABCF3-202ENST00000421340 PTPRUQ92729 1446 aa30.08■■■□□ 2.41
ABCF3-202ENST00000421340 AMOTL2Q9Y2J4 779 aa30.08■■■□□ 2.41
ABCF3-202ENST00000421340 TMF1P82094 1093 aa30.07■■■□□ 2.4
ABCF3-202ENST00000421340 PRAM1Q96QH2 718 aa30.06■■■□□ 2.4
ABCF3-202ENST00000421340 POGKQ9P215 609 aa30.06■■■□□ 2.4
ABCF3-202ENST00000421340 KNDC1Q76NI1 1749 aa30.05■■■□□ 2.4
ABCF3-202ENST00000421340 ARHGEF28Q8N1W1 1705 aaKnown RBP30.05■■■□□ 2.4
ABCF3-202ENST00000421340 C11orf95C9JLR9 678 aaPredicted RBP30.05■■■□□ 2.4
ABCF3-202ENST00000421340 CPS1P31327 1500 aa30.05■■■□□ 2.4
ABCF3-202ENST00000421340 CDCA8Q53HL2 280 aa30.03■■■□□ 2.4
ABCF3-202ENST00000421340 PTCH1Q13635 1447 aa30.03■■■□□ 2.4
ABCF3-202ENST00000421340 WASHC2AQ641Q2 1341 aa30.02■■■□□ 2.4
ABCF3-202ENST00000421340 KCNA6P17658 529 aa30.02■■■□□ 2.4
ABCF3-202ENST00000421340 DMRT2Q9Y5R5 561 aa30.02■■■□□ 2.4
ABCF3-202ENST00000421340 CCDC7Q96M83 1385 aa30.02■■■□□ 2.4
ABCF3-202ENST00000421340 KIF7Q2M1P5 1343 aa30■■■□□ 2.39
ABCF3-202ENST00000421340 ROBO2Q9HCK4 1378 aa30■■■□□ 2.39
ABCF3-202ENST00000421340 STRCQ7RTU9 1775 aa30■■■□□ 2.39
ABCF3-202ENST00000421340 PUS7Q96PZ0 661 aaKnown RBP29.99■■■□□ 2.39
ABCF3-202ENST00000421340 WAPLQ7Z5K2 1190 aa29.98■■■□□ 2.39
ABCF3-202ENST00000421340 XRN1Q8IZH2 1706 aaKnown RBP29.98■■■□□ 2.39
ABCF3-202ENST00000421340 DISP3Q9P2K9 1392 aa29.96■■■□□ 2.39
ABCF3-202ENST00000421340 CHD2O14647 1828 aaKnown RBP29.95■■■□□ 2.39
ABCF3-202ENST00000421340 EVC2Q86UK5 1308 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms