RNA–Protein interactions for RNA: ENST00000421049.1

PAXBP1-203, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 3

Gene PAXBP1, Length 339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-203ENST00000421049 AK7Q96M32 723 aa8.7□□□□□ -1.02
PAXBP1-203ENST00000421049 TTLL12Q14166 644 aaPredicted RBP8.69□□□□□ -1.02
PAXBP1-203ENST00000421049 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
PAXBP1-203ENST00000421049 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
PAXBP1-203ENST00000421049 TMEM134Q9H6X4 195 aa8.69□□□□□ -1.02
PAXBP1-203ENST00000421049 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
PAXBP1-203ENST00000421049 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
PAXBP1-203ENST00000421049 SOWAHBA6NEL2 793 aa8.67□□□□□ -1.02
PAXBP1-203ENST00000421049 PTPN5P54829 565 aa8.67□□□□□ -1.02
PAXBP1-203ENST00000421049 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
PAXBP1-203ENST00000421049 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
PAXBP1-203ENST00000421049 TRIM66O15016 1216 aa8.65□□□□□ -1.02
PAXBP1-203ENST00000421049 CLCN1P35523 988 aa8.64□□□□□ -1.03
PAXBP1-203ENST00000421049 DDX11L8A8MPP1 907 aa8.63□□□□□ -1.03
PAXBP1-203ENST00000421049 AMHR2Q16671 573 aa8.63□□□□□ -1.03
PAXBP1-203ENST00000421049 RDH13Q8NBN7 331 aa8.63□□□□□ -1.03
PAXBP1-203ENST00000421049 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
PAXBP1-203ENST00000421049 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
PAXBP1-203ENST00000421049 PPP4CP60510 307 aa8.62□□□□□ -1.03
PAXBP1-203ENST00000421049 NECTIN2Q92692 538 aa8.62□□□□□ -1.03
PAXBP1-203ENST00000421049 DAXXQ9UER7 740 aaPredicted RBP8.62□□□□□ -1.03
PAXBP1-203ENST00000421049 PDE4DQ08499 809 aa8.61□□□□□ -1.03
PAXBP1-203ENST00000421049 SULF1Q8IWU6 871 aa8.61□□□□□ -1.03
PAXBP1-203ENST00000421049 WBP1LQ9NX94 342 aa8.61□□□□□ -1.03
PAXBP1-203ENST00000421049 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
PAXBP1-203ENST00000421049 CFHP08603 1231 aa8.6□□□□□ -1.03
PAXBP1-203ENST00000421049 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
PAXBP1-203ENST00000421049 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
PAXBP1-203ENST00000421049 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
PAXBP1-203ENST00000421049 REPIN1Q9BWE0 567 aaKnown RBP8.57□□□□□ -1.04
PAXBP1-203ENST00000421049 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
PAXBP1-203ENST00000421049 SLC10A3P09131 477 aa8.56□□□□□ -1.04
PAXBP1-203ENST00000421049 KMT5BQ4FZB7 885 aa8.56□□□□□ -1.04
PAXBP1-203ENST00000421049 PRR14Q9BWN1 585 aa8.56□□□□□ -1.04
PAXBP1-203ENST00000421049 APLP1P51693 650 aa8.55□□□□□ -1.04
PAXBP1-203ENST00000421049 NEUROD2Q15784 382 aa8.55□□□□□ -1.04
PAXBP1-203ENST00000421049 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
PAXBP1-203ENST00000421049 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
PAXBP1-203ENST00000421049 CD46P15529 392 aa8.54□□□□□ -1.04
PAXBP1-203ENST00000421049 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
PAXBP1-203ENST00000421049 SSTR3P32745 418 aaPredicted RBP8.53□□□□□ -1.04
PAXBP1-203ENST00000421049 MS4A1P11836 297 aa8.51□□□□□ -1.05
PAXBP1-203ENST00000421049 KDM4CQ9H3R0 1056 aa8.51□□□□□ -1.05
PAXBP1-203ENST00000421049 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
PAXBP1-203ENST00000421049 GCGRP47871 477 aa8.5□□□□□ -1.05
PAXBP1-203ENST00000421049 ACTN4O43707 911 aaKnown RBP8.49□□□□□ -1.05
PAXBP1-203ENST00000421049 COPS2P61201 443 aa8.49□□□□□ -1.05
PAXBP1-203ENST00000421049 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
PAXBP1-203ENST00000421049 BEGAINQ9BUH8 593 aa8.49□□□□□ -1.05
PAXBP1-203ENST00000421049 BRPF1P55201 1214 aaPredicted RBP8.48□□□□□ -1.05
PAXBP1-203ENST00000421049 FUT2Q10981 343 aa8.48□□□□□ -1.05
PAXBP1-203ENST00000421049 KDM4AO75164 1064 aa8.47□□□□□ -1.05
PAXBP1-203ENST00000421049 PUS10Q3MIT2 529 aaKnown RBP8.47□□□□□ -1.05
PAXBP1-203ENST00000421049 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
PAXBP1-203ENST00000421049 MTRQ99707 1265 aa8.47□□□□□ -1.05
PAXBP1-203ENST00000421049 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
PAXBP1-203ENST00000421049 USP46P62068 366 aa8.44□□□□□ -1.06
PAXBP1-203ENST00000421049 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
PAXBP1-203ENST00000421049 IL21Q9HBE4 155 aa8.44□□□□□ -1.06
PAXBP1-203ENST00000421049 HOXA2O43364 376 aa8.43□□□□□ -1.06
PAXBP1-203ENST00000421049 NR1I2O75469 434 aa8.43□□□□□ -1.06
PAXBP1-203ENST00000421049 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
PAXBP1-203ENST00000421049 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
PAXBP1-203ENST00000421049 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
PAXBP1-203ENST00000421049 FAM117AQ9C073 453 aa8.43□□□□□ -1.06
PAXBP1-203ENST00000421049 TLL1O43897 1013 aa8.42□□□□□ -1.06
PAXBP1-203ENST00000421049 KCNC4Q03721 635 aa8.42□□□□□ -1.06
PAXBP1-203ENST00000421049 HLA-CQ95604 372 aa8.42□□□□□ -1.06
PAXBP1-203ENST00000421049 PLA2G2EQ9NZK7 142 aa8.42□□□□□ -1.06
PAXBP1-203ENST00000421049 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
PAXBP1-203ENST00000421049 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
PAXBP1-203ENST00000421049 TJAP1Q5JTD0 557 aa8.41□□□□□ -1.06
PAXBP1-203ENST00000421049 MORN1Q5T089 497 aa8.41□□□□□ -1.06
PAXBP1-203ENST00000421049 DIXDC1Q155Q3 683 aa8.4□□□□□ -1.06
PAXBP1-203ENST00000421049 ZNF516Q92618 1163 aa8.4□□□□□ -1.06
PAXBP1-203ENST00000421049 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
PAXBP1-203ENST00000421049 ZPR1O75312 459 aa8.39□□□□□ -1.07
PAXBP1-203ENST00000421049 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
PAXBP1-203ENST00000421049 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
PAXBP1-203ENST00000421049 FDX1P10109 184 aa8.38□□□□□ -1.07
PAXBP1-203ENST00000421049 NDUFV2P19404 249 aa8.38□□□□□ -1.07
PAXBP1-203ENST00000421049 IL27Q8NEV9 243 aa8.38□□□□□ -1.07
PAXBP1-203ENST00000421049 PLEKHG3A1L390 1219 aa8.37□□□□□ -1.07
PAXBP1-203ENST00000421049 Q3C1V9 767 aa8.37□□□□□ -1.07
PAXBP1-203ENST00000421049 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
PAXBP1-203ENST00000421049 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
PAXBP1-203ENST00000421049 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
PAXBP1-203ENST00000421049 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
PAXBP1-203ENST00000421049 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
PAXBP1-203ENST00000421049 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
PAXBP1-203ENST00000421049 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
PAXBP1-203ENST00000421049 ADH1BP00325 375 aa8.35□□□□□ -1.07
PAXBP1-203ENST00000421049 CLK2P49760 499 aaKnown RBP8.35□□□□□ -1.07
PAXBP1-203ENST00000421049 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
PAXBP1-203ENST00000421049 NKX2-3Q8TAU0 364 aa8.35□□□□□ -1.07
PAXBP1-203ENST00000421049 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
PAXBP1-203ENST00000421049 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
PAXBP1-203ENST00000421049 SPSB2Q99619 263 aa8.34□□□□□ -1.07
PAXBP1-203ENST00000421049 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
PAXBP1-203ENST00000421049 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms