RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 EID1Q9Y6B2 187 aa21.36■■□□□ 1.01
PTPN18-204ENST00000420717 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
PTPN18-204ENST00000420717 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
PTPN18-204ENST00000420717 IFT172Q9UG01 1749 aa21.35■■□□□ 1.01
PTPN18-204ENST00000420717 PPLO60437 1756 aa21.35■■□□□ 1.01
PTPN18-204ENST00000420717 DIP2AQ14689 1571 aa21.35■■□□□ 1.01
PTPN18-204ENST00000420717 FOXD1Q16676 465 aa21.34■■□□□ 1.01
PTPN18-204ENST00000420717 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
PTPN18-204ENST00000420717 SETBP1Q9Y6X0 1596 aa21.33■■□□□ 1.01
PTPN18-204ENST00000420717 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1
PTPN18-204ENST00000420717 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.32■■□□□ 1
PTPN18-204ENST00000420717 HDGFP51858 240 aaKnown RBP21.3■■□□□ 1
PTPN18-204ENST00000420717 IQSEC2Q5JU85 1478 aa21.3■■□□□ 1
PTPN18-204ENST00000420717 NWD1Q149M9 1564 aa21.3■■□□□ 1
PTPN18-204ENST00000420717 CPS1P31327 1500 aa21.29■■□□□ 1
PTPN18-204ENST00000420717 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
PTPN18-204ENST00000420717 STRCP1A6NGW2 1772 aa21.28■■□□□ 1
PTPN18-204ENST00000420717 CHGAP10645 457 aaKnown RBP21.27■■□□□ 1
PTPN18-204ENST00000420717 ADAMTS13Q76LX8 1427 aa21.27■■□□□ 1
PTPN18-204ENST00000420717 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
PTPN18-204ENST00000420717 ZNF335Q9H4Z2 1342 aaPredicted RBP21.24■□□□□ 0.99
PTPN18-204ENST00000420717 MYOM2P54296 1465 aa21.23■□□□□ 0.99
PTPN18-204ENST00000420717 CHD2O14647 1828 aaKnown RBP21.22■□□□□ 0.99
PTPN18-204ENST00000420717 DHX57Q6P158 1386 aaKnown RBP21.22■□□□□ 0.99
PTPN18-204ENST00000420717 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
PTPN18-204ENST00000420717 NKTRP30414 1462 aaKnown RBP21.21■□□□□ 0.99
PTPN18-204ENST00000420717 NRXN1Q9ULB1 1477 aa21.21■□□□□ 0.99
PTPN18-204ENST00000420717 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
PTPN18-204ENST00000420717 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
PTPN18-204ENST00000420717 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
PTPN18-204ENST00000420717 XRN1Q8IZH2 1706 aaKnown RBP21.18■□□□□ 0.98
PTPN18-204ENST00000420717 PRAG1Q86YV5 1406 aa21.17■□□□□ 0.98
PTPN18-204ENST00000420717 LAMC1P11047 1609 aa21.16■□□□□ 0.98
PTPN18-204ENST00000420717 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
PTPN18-204ENST00000420717 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
PTPN18-204ENST00000420717 LRRC7Q96NW7 1537 aa21.15■□□□□ 0.98
PTPN18-204ENST00000420717 CERKQ8TCT0 537 aa21.15■□□□□ 0.98
PTPN18-204ENST00000420717 XIRP1Q702N8 1843 aaKnown RBP21.15■□□□□ 0.98
PTPN18-204ENST00000420717 ALKQ9UM73 1620 aa21.15■□□□□ 0.98
PTPN18-204ENST00000420717 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
PTPN18-204ENST00000420717 KCNA6P17658 529 aa21.12■□□□□ 0.97
PTPN18-204ENST00000420717 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
PTPN18-204ENST00000420717 STAC3Q96MF2 364 aa21.09■□□□□ 0.97
PTPN18-204ENST00000420717 PTPRUQ92729 1446 aa21.09■□□□□ 0.97
PTPN18-204ENST00000420717 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
PTPN18-204ENST00000420717 RGL3Q3MIN7 710 aa21.08■□□□□ 0.97
PTPN18-204ENST00000420717 ADGRF5Q8IZF2 1346 aa21.07■□□□□ 0.96
PTPN18-204ENST00000420717 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
PTPN18-204ENST00000420717 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
PTPN18-204ENST00000420717 METP08581 1390 aa21.07■□□□□ 0.96
PTPN18-204ENST00000420717 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
PTPN18-204ENST00000420717 BCANQ96GW7 911 aa21.05■□□□□ 0.96
PTPN18-204ENST00000420717 KIAA1210Q9ULL0 1709 aa21.04■□□□□ 0.96
PTPN18-204ENST00000420717 TECPR2O15040 1411 aa21.04■□□□□ 0.96
PTPN18-204ENST00000420717 PCGF6Q9BYE7 350 aa21.03■□□□□ 0.96
PTPN18-204ENST00000420717 ADGRB1O14514 1584 aa21.02■□□□□ 0.95
PTPN18-204ENST00000420717 TMEM94Q12767 1356 aa21■□□□□ 0.95
PTPN18-204ENST00000420717 FBXO41Q8TF61 875 aa21■□□□□ 0.95
PTPN18-204ENST00000420717 C14orf93Q9H972 538 aaKnown RBP20.98■□□□□ 0.95
PTPN18-204ENST00000420717 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
PTPN18-204ENST00000420717 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
PTPN18-204ENST00000420717 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
PTPN18-204ENST00000420717 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
PTPN18-204ENST00000420717 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
PTPN18-204ENST00000420717 NALCNQ8IZF0 1738 aa20.95■□□□□ 0.94
PTPN18-204ENST00000420717 DCCP43146 1447 aa20.95■□□□□ 0.94
PTPN18-204ENST00000420717 DLC1Q96QB1 1528 aa20.94■□□□□ 0.94
PTPN18-204ENST00000420717 ABCC11Q96J66 1382 aa20.94■□□□□ 0.94
PTPN18-204ENST00000420717 YTHDC2Q9H6S0 1430 aaKnown RBP20.94■□□□□ 0.94
PTPN18-204ENST00000420717 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.93■□□□□ 0.94
PTPN18-204ENST00000420717 PROSER2Q86WR7 435 aaPredicted RBP20.93■□□□□ 0.94
PTPN18-204ENST00000420717 SIN3AQ96ST3 1273 aa20.93■□□□□ 0.94
PTPN18-204ENST00000420717 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
PTPN18-204ENST00000420717 ADGRL3Q9HAR2 1447 aa20.92■□□□□ 0.94
PTPN18-204ENST00000420717 FAM135BQ49AJ0 1406 aa20.91■□□□□ 0.94
PTPN18-204ENST00000420717 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
PTPN18-204ENST00000420717 MSH6P52701 1360 aa20.89■□□□□ 0.93
PTPN18-204ENST00000420717 CFAP70Q5T0N1 1121 aa20.89■□□□□ 0.93
PTPN18-204ENST00000420717 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
PTPN18-204ENST00000420717 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
PTPN18-204ENST00000420717 CDC42BPGQ6DT37 1551 aa20.88■□□□□ 0.93
PTPN18-204ENST00000420717 ARHGEF28Q8N1W1 1705 aaKnown RBP20.87■□□□□ 0.93
PTPN18-204ENST00000420717 UBAP1LF5GYI3 381 aa20.86■□□□□ 0.93
PTPN18-204ENST00000420717 TOM1O60784 492 aa20.86■□□□□ 0.93
PTPN18-204ENST00000420717 KDM2AQ9Y2K7 1162 aa20.86■□□□□ 0.93
PTPN18-204ENST00000420717 ADGRB2O60241 1585 aa20.85■□□□□ 0.93
PTPN18-204ENST00000420717 ILDR1Q86SU0 546 aaPredicted RBP20.84■□□□□ 0.93
PTPN18-204ENST00000420717 TMEM132EQ6IEE7 984 aa20.83■□□□□ 0.93
PTPN18-204ENST00000420717 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
PTPN18-204ENST00000420717 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
PTPN18-204ENST00000420717 NEUROD1Q13562 356 aa20.82■□□□□ 0.92
PTPN18-204ENST00000420717 RBM33Q96EV2 1170 aaKnown RBP20.81■□□□□ 0.92
PTPN18-204ENST00000420717 ROBO1Q9Y6N7 1651 aa20.8■□□□□ 0.92
PTPN18-204ENST00000420717 GPRASP1Q5JY77 1395 aa20.8■□□□□ 0.92
PTPN18-204ENST00000420717 MST1RQ04912 1400 aa20.79■□□□□ 0.92
PTPN18-204ENST00000420717 CADPS2Q86UW7 1296 aa20.79■□□□□ 0.92
PTPN18-204ENST00000420717 RALGAPBQ86X10 1494 aa20.79■□□□□ 0.92
PTPN18-204ENST00000420717 PLEKHH1Q9ULM0 1364 aa20.78■□□□□ 0.92
PTPN18-204ENST00000420717 TIMELESSQ9UNS1 1208 aa20.78■□□□□ 0.92
PTPN18-204ENST00000420717 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms