RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 TMEM94Q12767 1356 aa17.71■□□□□ 0.43
THUMPD3-204ENST00000419437 NUP155O75694 1391 aa17.69■□□□□ 0.42
THUMPD3-204ENST00000419437 ROBO1Q9Y6N7 1651 aa17.69■□□□□ 0.42
THUMPD3-204ENST00000419437 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
THUMPD3-204ENST00000419437 GCC2Q8IWJ2 1684 aa17.67■□□□□ 0.42
THUMPD3-204ENST00000419437 CHD2O14647 1828 aaKnown RBP17.66■□□□□ 0.42
THUMPD3-204ENST00000419437 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
THUMPD3-204ENST00000419437 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
THUMPD3-204ENST00000419437 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
THUMPD3-204ENST00000419437 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
THUMPD3-204ENST00000419437 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.41
THUMPD3-204ENST00000419437 UNC13BO14795 1591 aa17.64■□□□□ 0.41
THUMPD3-204ENST00000419437 TMEM131LA2VDJ0 1609 aa17.64■□□□□ 0.41
THUMPD3-204ENST00000419437 PLEKHG1Q9ULL1 1385 aa17.64■□□□□ 0.41
THUMPD3-204ENST00000419437 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
THUMPD3-204ENST00000419437 HDGFP51858 240 aaKnown RBP17.63■□□□□ 0.41
THUMPD3-204ENST00000419437 MSH6P52701 1360 aa17.63■□□□□ 0.41
THUMPD3-204ENST00000419437 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
THUMPD3-204ENST00000419437 NAIPQ13075 1403 aa17.61■□□□□ 0.41
THUMPD3-204ENST00000419437 NCOA3Q9Y6Q9 1424 aa17.6■□□□□ 0.41
THUMPD3-204ENST00000419437 RIMS2Q9UQ26 1411 aa17.59■□□□□ 0.41
THUMPD3-204ENST00000419437 BCANQ96GW7 911 aa17.59■□□□□ 0.41
THUMPD3-204ENST00000419437 PHLPP1O60346 1717 aa17.58■□□□□ 0.41
THUMPD3-204ENST00000419437 E9PCH4 1651 aa17.58■□□□□ 0.41
THUMPD3-204ENST00000419437 DIP2AQ14689 1571 aa17.58■□□□□ 0.41
THUMPD3-204ENST00000419437 SLAIN2Q9P270 581 aa17.58■□□□□ 0.4
THUMPD3-204ENST00000419437 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
THUMPD3-204ENST00000419437 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
THUMPD3-204ENST00000419437 IQGAP3Q86VI3 1631 aa17.57■□□□□ 0.4
THUMPD3-204ENST00000419437 PPP1R15AO75807 674 aaPredicted RBP17.56■□□□□ 0.4
THUMPD3-204ENST00000419437 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
THUMPD3-204ENST00000419437 PIK3R4Q99570 1358 aa17.54■□□□□ 0.4
THUMPD3-204ENST00000419437 HFM1A2PYH4 1435 aa17.54■□□□□ 0.4
THUMPD3-204ENST00000419437 JCADQ9P266 1359 aa17.53■□□□□ 0.4
THUMPD3-204ENST00000419437 COL16A1Q07092 1604 aaPredicted RBP17.53■□□□□ 0.4
THUMPD3-204ENST00000419437 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
THUMPD3-204ENST00000419437 ADAMTS13Q76LX8 1427 aa17.52■□□□□ 0.4
THUMPD3-204ENST00000419437 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
THUMPD3-204ENST00000419437 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
THUMPD3-204ENST00000419437 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
THUMPD3-204ENST00000419437 TRPM2O94759 1503 aa17.5■□□□□ 0.39
THUMPD3-204ENST00000419437 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
THUMPD3-204ENST00000419437 CADPS2Q86UW7 1296 aa17.48■□□□□ 0.39
THUMPD3-204ENST00000419437 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
THUMPD3-204ENST00000419437 C19orf44Q9H6X5 657 aa17.47■□□□□ 0.39
THUMPD3-204ENST00000419437 SHPRHQ149N8 1683 aa17.47■□□□□ 0.39
THUMPD3-204ENST00000419437 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
THUMPD3-204ENST00000419437 SPHKAPQ2M3C7 1700 aa17.45■□□□□ 0.38
THUMPD3-204ENST00000419437 FOXD1Q16676 465 aa17.45■□□□□ 0.38
THUMPD3-204ENST00000419437 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
THUMPD3-204ENST00000419437 DCCP43146 1447 aa17.45■□□□□ 0.38
THUMPD3-204ENST00000419437 ATF3P18847 181 aa17.44■□□□□ 0.38
THUMPD3-204ENST00000419437 SETBP1Q9Y6X0 1596 aa17.44■□□□□ 0.38
THUMPD3-204ENST00000419437 XRN1Q8IZH2 1706 aaKnown RBP17.43■□□□□ 0.38
THUMPD3-204ENST00000419437 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
THUMPD3-204ENST00000419437 NRXN3Q9Y4C0 1643 aa17.42■□□□□ 0.38
THUMPD3-204ENST00000419437 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
THUMPD3-204ENST00000419437 LRP6O75581 1613 aa17.41■□□□□ 0.38
THUMPD3-204ENST00000419437 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
THUMPD3-204ENST00000419437 PTPRUQ92729 1446 aa17.4■□□□□ 0.38
THUMPD3-204ENST00000419437 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
THUMPD3-204ENST00000419437 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
THUMPD3-204ENST00000419437 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
THUMPD3-204ENST00000419437 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
THUMPD3-204ENST00000419437 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
THUMPD3-204ENST00000419437 BRINP3Q76B58 766 aa17.36■□□□□ 0.37
THUMPD3-204ENST00000419437 CLTCL1P53675 1640 aa17.35■□□□□ 0.37
THUMPD3-204ENST00000419437 MST1RQ04912 1400 aa17.34■□□□□ 0.37
THUMPD3-204ENST00000419437 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
THUMPD3-204ENST00000419437 KIF1BO60333 1816 aa17.33■□□□□ 0.37
THUMPD3-204ENST00000419437 RAB3GAP2Q9H2M9 1393 aa17.33■□□□□ 0.36
THUMPD3-204ENST00000419437 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
THUMPD3-204ENST00000419437 RGL3Q3MIN7 710 aa17.32■□□□□ 0.36
THUMPD3-204ENST00000419437 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
THUMPD3-204ENST00000419437 ADGRL3Q9HAR2 1447 aa17.31■□□□□ 0.36
THUMPD3-204ENST00000419437 METP08581 1390 aa17.31■□□□□ 0.36
THUMPD3-204ENST00000419437 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
THUMPD3-204ENST00000419437 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
THUMPD3-204ENST00000419437 RPGRIP1LQ68CZ1 1315 aa17.29■□□□□ 0.36
THUMPD3-204ENST00000419437 LRRC59Q96AG4 307 aaKnown RBP17.29■□□□□ 0.36
THUMPD3-204ENST00000419437 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
THUMPD3-204ENST00000419437 CCDC144AA2RUR9 1427 aa17.28■□□□□ 0.36
THUMPD3-204ENST00000419437 LAMC1P11047 1609 aa17.28■□□□□ 0.36
THUMPD3-204ENST00000419437 RXRBP28702 533 aa17.27■□□□□ 0.36
THUMPD3-204ENST00000419437 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
THUMPD3-204ENST00000419437 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
THUMPD3-204ENST00000419437 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
THUMPD3-204ENST00000419437 NUTM2BA6NNL0 878 aaPredicted RBP17.25■□□□□ 0.35
THUMPD3-204ENST00000419437 NUTM2EB1AL46 878 aaPredicted RBP17.25■□□□□ 0.35
THUMPD3-204ENST00000419437 NUTM2AQ8IVF1 878 aaPredicted RBP17.25■□□□□ 0.35
THUMPD3-204ENST00000419437 HRCP23327 699 aa17.24■□□□□ 0.35
THUMPD3-204ENST00000419437 AFF2P51816 1311 aa17.23■□□□□ 0.35
THUMPD3-204ENST00000419437 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
THUMPD3-204ENST00000419437 EP400Q96L91 3159 aa17.23■□□□□ 0.35
THUMPD3-204ENST00000419437 C1orf167Q5SNV9 1468 aa17.22■□□□□ 0.35
THUMPD3-204ENST00000419437 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
THUMPD3-204ENST00000419437 PPLO60437 1756 aa17.2■□□□□ 0.34
THUMPD3-204ENST00000419437 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
THUMPD3-204ENST00000419437 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
THUMPD3-204ENST00000419437 RBM6P78332 1123 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms