RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, human

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-208	ENST00000419205	CAMSAP1	Q5T5Y3	1602 aa		28.19	■■■□□ 2.1
FAM3A-208	ENST00000419205	PNISR	Q8TF01	805 aa	Known RBP	28.16	■■■□□ 2.1
FAM3A-208	ENST00000419205	RAPGEF3	O95398	923 aa		28.15	■■■□□ 2.1
FAM3A-208	ENST00000419205	CNGB1	Q14028	1251 aa	Predicted RBP	28.15	■■■□□ 2.1
FAM3A-208	ENST00000419205	TMC1	Q8TDI8	760 aa		28.15	■■■□□ 2.1
FAM3A-208	ENST00000419205	EIF3A	Q14152	1382 aa	Known RBP	28.15	■■■□□ 2.1
FAM3A-208	ENST00000419205	ZC3H13	Q5T200	1668 aa	Known RBP	28.15	■■■□□ 2.1
FAM3A-208	ENST00000419205	LRPPRC	P42704	1394 aa	Known RBP	28.13	■■■□□ 2.09
FAM3A-208	ENST00000419205	GGT6	Q6P531	493 aa		28.12	■■■□□ 2.09
FAM3A-208	ENST00000419205	PPL	O60437	1756 aa		28.12	■■■□□ 2.09
FAM3A-208	ENST00000419205	CYB5RL	Q6IPT4	315 aa		28.11	■■■□□ 2.09
FAM3A-208	ENST00000419205	SYNM	O15061	1565 aa		28.11	■■■□□ 2.09
FAM3A-208	ENST00000419205	CDCA8	Q53HL2	280 aa		28.09	■■■□□ 2.09
FAM3A-208	ENST00000419205	DIP2B	Q9P265	1576 aa		28.09	■■■□□ 2.09
FAM3A-208	ENST00000419205	ZMYM4	Q5VZL5	1548 aa		28.09	■■■□□ 2.09
FAM3A-208	ENST00000419205	NOS1	P29475	1434 aa		28.09	■■■□□ 2.09
FAM3A-208	ENST00000419205	SETBP1	Q9Y6X0	1596 aa		28.09	■■■□□ 2.09
FAM3A-208	ENST00000419205	PIK3C2B	O00750	1634 aa		28.08	■■■□□ 2.09
FAM3A-208	ENST00000419205	ADGRF5	Q8IZF2	1346 aa		28.08	■■■□□ 2.09
FAM3A-208	ENST00000419205	SIGLEC1	Q9BZZ2	1709 aa		28.08	■■■□□ 2.09
FAM3A-208	ENST00000419205	NLRP13	Q86W25	1043 aa		28.08	■■■□□ 2.09
FAM3A-208	ENST00000419205	PANK3	Q9H999	370 aa		28.08	■■■□□ 2.09
FAM3A-208	ENST00000419205	CFAP65	Q6ZU64	1925 aa	Known RBP	28.07	■■■□□ 2.08
FAM3A-208	ENST00000419205	MYO3A	Q8NEV4	1616 aa		28.07	■■■□□ 2.08
FAM3A-208	ENST00000419205	ARHGAP31	Q2M1Z3	1444 aa		28.07	■■■□□ 2.08
FAM3A-208	ENST00000419205	BCAN	Q96GW7	911 aa		28.06	■■■□□ 2.08
FAM3A-208	ENST00000419205	KDM5A	P29375	1690 aa	Known RBP	28.04	■■■□□ 2.08
FAM3A-208	ENST00000419205	MYOM1	P52179	1685 aa		28.04	■■■□□ 2.08
FAM3A-208	ENST00000419205	SLC24A1	O60721	1099 aa		28.04	■■■□□ 2.08
FAM3A-208	ENST00000419205	CFAP70	Q5T0N1	1121 aa		28.04	■■■□□ 2.08
FAM3A-208	ENST00000419205	YEATS2	Q9ULM3	1422 aa		28.03	■■■□□ 2.08
FAM3A-208	ENST00000419205	SMG6	Q86US8	1419 aa	Known RBP	28.02	■■■□□ 2.08
FAM3A-208	ENST00000419205	RPGRIP1L	Q68CZ1	1315 aa		28.02	■■■□□ 2.08
FAM3A-208	ENST00000419205	PIK3C2G	O75747	1445 aa		28	■■■□□ 2.07
FAM3A-208	ENST00000419205	ERICH6B	Q5W0A0	696 aa		27.99	■■■□□ 2.07
FAM3A-208	ENST00000419205	SBNO2	Q9Y2G9	1366 aa		27.97	■■■□□ 2.07
FAM3A-208	ENST00000419205	INSR	P06213	1382 aa		27.96	■■■□□ 2.07
FAM3A-208	ENST00000419205	ERVK-7	P63135	1459 aa		27.95	■■■□□ 2.06
FAM3A-208	ENST00000419205	CHGA	P10645	457 aa	Known RBP	27.94	■■■□□ 2.06
FAM3A-208	ENST00000419205	FAM69C	Q0P6D2	419 aa		27.94	■■■□□ 2.06
FAM3A-208	ENST00000419205	CC2D1B	Q5T0F9	858 aa	Known RBP	27.94	■■■□□ 2.06
FAM3A-208	ENST00000419205	ADGRB1	O14514	1584 aa		27.93	■■■□□ 2.06
FAM3A-208	ENST00000419205	RERE	Q9P2R6	1566 aa		27.93	■■■□□ 2.06
FAM3A-208	ENST00000419205	NEXMIF	Q5QGS0	1516 aa		27.91	■■■□□ 2.06
FAM3A-208	ENST00000419205	ASXL1	Q8IXJ9	1541 aa		27.91	■■■□□ 2.06
FAM3A-208	ENST00000419205	C14orf93	Q9H972	538 aa	Known RBP	27.91	■■■□□ 2.06
FAM3A-208	ENST00000419205	PREX1	Q8TCU6	1659 aa		27.91	■■■□□ 2.06
FAM3A-208	ENST00000419205	NUDC	Q9Y266	331 aa		27.91	■■■□□ 2.06
FAM3A-208	ENST00000419205	NPC1L1	Q9UHC9	1359 aa		27.9	■■■□□ 2.06
FAM3A-208	ENST00000419205	TSPOAP1	O95153	1857 aa		27.9	■■■□□ 2.06
FAM3A-208	ENST00000419205	KNSTRN	Q9Y448	316 aa		27.89	■■■□□ 2.06
FAM3A-208	ENST00000419205	AMER1	Q5JTC6	1135 aa	Predicted RBP	27.87	■■■□□ 2.05
FAM3A-208	ENST00000419205	AGL	P35573	1532 aa		27.86	■■■□□ 2.05
FAM3A-208	ENST00000419205	QRICH2	Q9H0J4	1663 aa		27.86	■■■□□ 2.05
FAM3A-208	ENST00000419205	BLM	P54132	1417 aa	Predicted RBP	27.84	■■■□□ 2.05
FAM3A-208	ENST00000419205	SLC52A1	Q9NWF4	448 aa		27.84	■■■□□ 2.05
FAM3A-208	ENST00000419205	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.83	■■■□□ 2.05
FAM3A-208	ENST00000419205	ZFYVE9	O95405	1425 aa		27.83	■■■□□ 2.05
FAM3A-208	ENST00000419205	IRX6	P78412	446 aa	Predicted RBP	27.82	■■■□□ 2.04
FAM3A-208	ENST00000419205	TMEM131L	A2VDJ0	1609 aa		27.81	■■■□□ 2.04
FAM3A-208	ENST00000419205	VGF	O15240	615 aa	Predicted RBP	27.81	■■■□□ 2.04
FAM3A-208	ENST00000419205	TSHZ2	Q9NRE2	1034 aa		27.81	■■■□□ 2.04
FAM3A-208	ENST00000419205	RNF123	Q5XPI4	1314 aa		27.8	■■■□□ 2.04
FAM3A-208	ENST00000419205	MYO5B	Q9ULV0	1848 aa		27.8	■■■□□ 2.04
FAM3A-208	ENST00000419205	IDI1	Q13907	227 aa		27.78	■■■□□ 2.04
FAM3A-208	ENST00000419205	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.77	■■■□□ 2.04
FAM3A-208	ENST00000419205	PPP2R1A	P30153	589 aa		27.77	■■■□□ 2.04
FAM3A-208	ENST00000419205	PPP4R2	Q9NY27	417 aa		27.77	■■■□□ 2.04
FAM3A-208	ENST00000419205	PPP6R1	Q9UPN7	881 aa		27.76	■■■□□ 2.03
FAM3A-208	ENST00000419205	KIF13A	Q9H1H9	1805 aa		27.76	■■■□□ 2.03
FAM3A-208	ENST00000419205	PDE3B	Q13370	1112 aa		27.75	■■■□□ 2.03
FAM3A-208	ENST00000419205	TRAK1	Q9UPV9	953 aa		27.74	■■■□□ 2.03
FAM3A-208	ENST00000419205	TMEM132E	Q6IEE7	984 aa		27.7	■■■□□ 2.02
FAM3A-208	ENST00000419205	ARHGEF40	Q8TER5	1519 aa		27.69	■■■□□ 2.02
FAM3A-208	ENST00000419205	CLTC	Q00610	1675 aa	Known RBP	27.69	■■■□□ 2.02
FAM3A-208	ENST00000419205	PUS7	Q96PZ0	661 aa	Known RBP	27.68	■■■□□ 2.02
FAM3A-208	ENST00000419205	CARD14	Q9BXL6	1004 aa		27.67	■■■□□ 2.02
FAM3A-208	ENST00000419205	SENP3-EIF4A1	A0A087X0R7	540 aa		27.66	■■■□□ 2.02
FAM3A-208	ENST00000419205	USP32	Q8NFA0	1604 aa		27.66	■■■□□ 2.02
FAM3A-208	ENST00000419205	SPATA31D1	Q6ZQQ2	1576 aa		27.64	■■■□□ 2.02
FAM3A-208	ENST00000419205	NUTM2D	Q5VT03	806 aa	Predicted RBP	27.63	■■■□□ 2.01
FAM3A-208	ENST00000419205	TULP4	Q9NRJ4	1543 aa		27.63	■■■□□ 2.01
FAM3A-208	ENST00000419205	ADAMTS8	Q9UP79	889 aa		27.62	■■■□□ 2.01
FAM3A-208	ENST00000419205	FBXO31	Q5XUX0	539 aa	Predicted RBP	27.61	■■■□□ 2.01
FAM3A-208	ENST00000419205	WDR43	Q15061	677 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
FAM3A-208	ENST00000419205	EVC2	Q86UK5	1308 aa		27.59	■■■□□ 2.01
FAM3A-208	ENST00000419205	NSD3	Q9BZ95	1437 aa		27.57	■■■□□ 2
FAM3A-208	ENST00000419205	SALL2	Q9Y467	1007 aa	Predicted RBP	27.55	■■■□□ 2
FAM3A-208	ENST00000419205	PTPRM	P28827	1452 aa		27.55	■■■□□ 2
FAM3A-208	ENST00000419205	ALK	Q9UM73	1620 aa		27.54	■■■□□ 2
FAM3A-208	ENST00000419205	SLC12A5	Q9H2X9	1139 aa		27.53	■■■□□ 2
FAM3A-208	ENST00000419205	RCAN3	Q9UKA8	241 aa		27.53	■■■□□ 2
FAM3A-208	ENST00000419205	A2ML1	A8K2U0	1454 aa		27.53	■■■□□ 2
FAM3A-208	ENST00000419205	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.51	■■□□□ 1.99
FAM3A-208	ENST00000419205	ANKRD36B	Q8N2N9	1353 aa		27.5	■■□□□ 1.99
FAM3A-208	ENST00000419205	CDCA7L	Q96GN5	454 aa		27.5	■■□□□ 1.99
FAM3A-208	ENST00000419205	POLR3A	O14802	1390 aa	Predicted RBP	27.5	■■□□□ 1.99
FAM3A-208	ENST00000419205	NINL	Q9Y2I6	1382 aa		27.5	■■□□□ 1.99
FAM3A-208	ENST00000419205	RRP1	P56182	461 aa	Known RBP	27.49	■■□□□ 1.99
FAM3A-208	ENST00000419205	B4GALNT3	Q6L9W6	998 aa		27.49	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms