RNA–Protein interactions for RNA: ENST00000419113.5

NDUFA3-206, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-206ENST00000419113 STAC3Q96MF2 364 aa23.74■■□□□ 1.39
NDUFA3-206ENST00000419113 RGL3Q3MIN7 710 aa23.73■■□□□ 1.39
NDUFA3-206ENST00000419113 TIMELESSQ9UNS1 1208 aa23.73■■□□□ 1.39
NDUFA3-206ENST00000419113 EID1Q9Y6B2 187 aa23.72■■□□□ 1.39
NDUFA3-206ENST00000419113 TONSLQ96HA7 1378 aa23.72■■□□□ 1.39
NDUFA3-206ENST00000419113 RIMS2Q9UQ26 1411 aa23.72■■□□□ 1.39
NDUFA3-206ENST00000419113 NEXMIFQ5QGS0 1516 aa23.72■■□□□ 1.39
NDUFA3-206ENST00000419113 POLR1AO95602 1720 aaPredicted RBP23.71■■□□□ 1.39
NDUFA3-206ENST00000419113 ZFYVE9O95405 1425 aa23.71■■□□□ 1.39
NDUFA3-206ENST00000419113 ANKLE2Q86XL3 938 aa23.69■■□□□ 1.38
NDUFA3-206ENST00000419113 VGFO15240 615 aaPredicted RBP23.68■■□□□ 1.38
NDUFA3-206ENST00000419113 SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
NDUFA3-206ENST00000419113 MYOM2P54296 1465 aa23.67■■□□□ 1.38
NDUFA3-206ENST00000419113 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
NDUFA3-206ENST00000419113 PPP1R15AO75807 674 aaPredicted RBP23.65■■□□□ 1.38
NDUFA3-206ENST00000419113 HSPA2P54652 639 aa23.65■■□□□ 1.38
NDUFA3-206ENST00000419113 DCAF11Q8TEB1 546 aa23.63■■□□□ 1.37
NDUFA3-206ENST00000419113 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
NDUFA3-206ENST00000419113 MED14O60244 1454 aa23.62■■□□□ 1.37
NDUFA3-206ENST00000419113 PLEKHG1Q9ULL1 1385 aa23.61■■□□□ 1.37
NDUFA3-206ENST00000419113 LTKP29376 864 aa23.6■■□□□ 1.37
NDUFA3-206ENST00000419113 STRCQ7RTU9 1775 aa23.6■■□□□ 1.37
NDUFA3-206ENST00000419113 NRXN1Q9ULB1 1477 aa23.59■■□□□ 1.37
NDUFA3-206ENST00000419113 IQGAP1P46940 1657 aa23.58■■□□□ 1.37
NDUFA3-206ENST00000419113 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
NDUFA3-206ENST00000419113 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
NDUFA3-206ENST00000419113 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
NDUFA3-206ENST00000419113 LAMC1P11047 1609 aa23.56■■□□□ 1.36
NDUFA3-206ENST00000419113 NUTM2DQ5VT03 806 aaPredicted RBP23.56■■□□□ 1.36
NDUFA3-206ENST00000419113 NCKAP5LQ9HCH0 1330 aa23.56■■□□□ 1.36
NDUFA3-206ENST00000419113 DMRT2Q9Y5R5 561 aa23.55■■□□□ 1.36
NDUFA3-206ENST00000419113 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
NDUFA3-206ENST00000419113 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
NDUFA3-206ENST00000419113 ADGRF5Q8IZF2 1346 aa23.54■■□□□ 1.36
NDUFA3-206ENST00000419113 BCANQ96GW7 911 aa23.53■■□□□ 1.36
NDUFA3-206ENST00000419113 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
NDUFA3-206ENST00000419113 PRAG1Q86YV5 1406 aa23.52■■□□□ 1.36
NDUFA3-206ENST00000419113 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
NDUFA3-206ENST00000419113 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
NDUFA3-206ENST00000419113 ALKQ9UM73 1620 aa23.48■■□□□ 1.35
NDUFA3-206ENST00000419113 TBX22Q9Y458 520 aa23.48■■□□□ 1.35
NDUFA3-206ENST00000419113 ADAMTS13Q76LX8 1427 aa23.47■■□□□ 1.35
NDUFA3-206ENST00000419113 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
NDUFA3-206ENST00000419113 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
NDUFA3-206ENST00000419113 TRPM1Q7Z4N2 1603 aa23.45■■□□□ 1.34
NDUFA3-206ENST00000419113 PIK3R4Q99570 1358 aa23.44■■□□□ 1.34
NDUFA3-206ENST00000419113 SLC26A8Q96RN1 970 aa23.42■■□□□ 1.34
NDUFA3-206ENST00000419113 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
NDUFA3-206ENST00000419113 NBPF8Q3BBV2 869 aa23.4■■□□□ 1.34
NDUFA3-206ENST00000419113 RALGAPBQ86X10 1494 aa23.4■■□□□ 1.34
NDUFA3-206ENST00000419113 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
NDUFA3-206ENST00000419113 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
NDUFA3-206ENST00000419113 ADGRB1O14514 1584 aa23.36■■□□□ 1.33
NDUFA3-206ENST00000419113 ROCK2O75116 1388 aaKnown RBP23.36■■□□□ 1.33
NDUFA3-206ENST00000419113 ASXL1Q8IXJ9 1541 aa23.35■■□□□ 1.33
NDUFA3-206ENST00000419113 METP08581 1390 aa23.35■■□□□ 1.33
NDUFA3-206ENST00000419113 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
NDUFA3-206ENST00000419113 GPRASP1Q5JY77 1395 aa23.34■■□□□ 1.33
NDUFA3-206ENST00000419113 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
NDUFA3-206ENST00000419113 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
NDUFA3-206ENST00000419113 XRN1Q8IZH2 1706 aaKnown RBP23.32■■□□□ 1.32
NDUFA3-206ENST00000419113 YTHDC2Q9H6S0 1430 aaKnown RBP23.32■■□□□ 1.32
NDUFA3-206ENST00000419113 KCNA6P17658 529 aa23.31■■□□□ 1.32
NDUFA3-206ENST00000419113 TMEM132EQ6IEE7 984 aa23.3■■□□□ 1.32
NDUFA3-206ENST00000419113 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
NDUFA3-206ENST00000419113 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
NDUFA3-206ENST00000419113 TECPR2O15040 1411 aa23.29■■□□□ 1.32
NDUFA3-206ENST00000419113 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
NDUFA3-206ENST00000419113 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
NDUFA3-206ENST00000419113 CARD11Q9BXL7 1154 aa23.28■■□□□ 1.32
NDUFA3-206ENST00000419113 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
NDUFA3-206ENST00000419113 CPS1P31327 1500 aa23.28■■□□□ 1.32
NDUFA3-206ENST00000419113 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
NDUFA3-206ENST00000419113 PTCH1Q13635 1447 aa23.26■■□□□ 1.31
NDUFA3-206ENST00000419113 SIRT1Q96EB6 747 aa23.25■■□□□ 1.31
NDUFA3-206ENST00000419113 EIF3AQ14152 1382 aaKnown RBP23.25■■□□□ 1.31
NDUFA3-206ENST00000419113 ARHGEF28Q8N1W1 1705 aaKnown RBP23.25■■□□□ 1.31
NDUFA3-206ENST00000419113 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
NDUFA3-206ENST00000419113 FAM135BQ49AJ0 1406 aa23.24■■□□□ 1.31
NDUFA3-206ENST00000419113 STK26Q9P289 416 aa23.23■■□□□ 1.31
NDUFA3-206ENST00000419113 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
NDUFA3-206ENST00000419113 TRAK1Q9UPV9 953 aa23.21■■□□□ 1.31
NDUFA3-206ENST00000419113 NCOA3Q9Y6Q9 1424 aa23.18■■□□□ 1.3
NDUFA3-206ENST00000419113 ROBO2Q9HCK4 1378 aa23.17■■□□□ 1.3
NDUFA3-206ENST00000419113 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
NDUFA3-206ENST00000419113 USP47Q96K76 1375 aa23.16■■□□□ 1.3
NDUFA3-206ENST00000419113 PROSER2Q86WR7 435 aaPredicted RBP23.16■■□□□ 1.3
NDUFA3-206ENST00000419113 POGKQ9P215 609 aa23.16■■□□□ 1.3
NDUFA3-206ENST00000419113 CENPJQ9HC77 1338 aaPredicted RBP23.14■■□□□ 1.3
NDUFA3-206ENST00000419113 EIF4G2P78344 907 aaKnown RBP eCLIP23.14■■□□□ 1.29
NDUFA3-206ENST00000419113 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
NDUFA3-206ENST00000419113 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
NDUFA3-206ENST00000419113 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
NDUFA3-206ENST00000419113 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
NDUFA3-206ENST00000419113 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
NDUFA3-206ENST00000419113 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
NDUFA3-206ENST00000419113 WAPLQ7Z5K2 1190 aa23.1■■□□□ 1.29
NDUFA3-206ENST00000419113 SBNO2Q9Y2G9 1366 aa23.1■■□□□ 1.29
NDUFA3-206ENST00000419113 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.29
NDUFA3-206ENST00000419113 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms