RNA–Protein interactions for RNA: ENST00000419073.1

LST1-215, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-215ENST00000419073 NUTM2AQ8IVF1 878 aaPredicted RBP24.08■■□□□ 1.45
LST1-215ENST00000419073 ERBINQ96RT1 1412 aa24.07■■□□□ 1.44
LST1-215ENST00000419073 PPP1R15AO75807 674 aaPredicted RBP24.06■■□□□ 1.44
LST1-215ENST00000419073 NWD1Q149M9 1564 aa24.05■■□□□ 1.44
LST1-215ENST00000419073 ATF3P18847 181 aa24.05■■□□□ 1.44
LST1-215ENST00000419073 SLC52A1Q9NWF4 448 aa24.05■■□□□ 1.44
LST1-215ENST00000419073 COL16A1Q07092 1604 aaPredicted RBP24.05■■□□□ 1.44
LST1-215ENST00000419073 HDGFP51858 240 aaKnown RBP24.04■■□□□ 1.44
LST1-215ENST00000419073 CADPS2Q86UW7 1296 aa24.04■■□□□ 1.44
LST1-215ENST00000419073 KDM5AP29375 1690 aaKnown RBP24.02■■□□□ 1.44
LST1-215ENST00000419073 C19orf44Q9H6X5 657 aa24.01■■□□□ 1.43
LST1-215ENST00000419073 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
LST1-215ENST00000419073 AFF2P51816 1311 aa24■■□□□ 1.43
LST1-215ENST00000419073 NCOA3Q9Y6Q9 1424 aa24■■□□□ 1.43
LST1-215ENST00000419073 TBX22Q9Y458 520 aa23.99■■□□□ 1.43
LST1-215ENST00000419073 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
LST1-215ENST00000419073 CDK12Q9NYV4 1490 aaPredicted RBP23.99■■□□□ 1.43
LST1-215ENST00000419073 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
LST1-215ENST00000419073 NOS1P29475 1434 aa23.97■■□□□ 1.43
LST1-215ENST00000419073 ABCC5O15440 1437 aa23.96■■□□□ 1.43
LST1-215ENST00000419073 NUTM2DQ5VT03 806 aaPredicted RBP23.95■■□□□ 1.42
LST1-215ENST00000419073 CHIC2Q9UKJ5 165 aa23.95■■□□□ 1.42
LST1-215ENST00000419073 LMTK2Q8IWU2 1503 aa23.94■■□□□ 1.42
LST1-215ENST00000419073 QTRT2Q9H974 415 aaKnown RBP23.94■■□□□ 1.42
LST1-215ENST00000419073 BRINP3Q76B58 766 aa23.93■■□□□ 1.42
LST1-215ENST00000419073 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
LST1-215ENST00000419073 AHDC1Q5TGY3 1603 aaPredicted RBP23.92■■□□□ 1.42
LST1-215ENST00000419073 RBM6P78332 1123 aaKnown RBP23.92■■□□□ 1.42
LST1-215ENST00000419073 CHGAP10645 457 aaKnown RBP23.91■■□□□ 1.42
LST1-215ENST00000419073 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.91■■□□□ 1.42
LST1-215ENST00000419073 C8orf37Q96NL8 207 aa23.91■■□□□ 1.42
LST1-215ENST00000419073 SHPRHQ149N8 1683 aa23.91■■□□□ 1.42
LST1-215ENST00000419073 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
LST1-215ENST00000419073 CHD2O14647 1828 aaKnown RBP23.9■■□□□ 1.42
LST1-215ENST00000419073 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
LST1-215ENST00000419073 FOXD1Q16676 465 aa23.88■■□□□ 1.41
LST1-215ENST00000419073 LRRC59Q96AG4 307 aaKnown RBP23.87■■□□□ 1.41
LST1-215ENST00000419073 RGS12O14924 1447 aa23.86■■□□□ 1.41
LST1-215ENST00000419073 DAPK1P53355 1430 aa23.86■■□□□ 1.41
LST1-215ENST00000419073 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
LST1-215ENST00000419073 VPS8Q8N3P4 1428 aa23.85■■□□□ 1.41
LST1-215ENST00000419073 ZRANB1Q9UGI0 708 aa23.85■■□□□ 1.41
LST1-215ENST00000419073 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
LST1-215ENST00000419073 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
LST1-215ENST00000419073 PIK3R4Q99570 1358 aa23.82■■□□□ 1.4
LST1-215ENST00000419073 DIP2AQ14689 1571 aa23.82■■□□□ 1.4
LST1-215ENST00000419073 SETD5Q9C0A6 1442 aa23.81■■□□□ 1.4
LST1-215ENST00000419073 ADAMTS13Q76LX8 1427 aa23.8■■□□□ 1.4
LST1-215ENST00000419073 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
LST1-215ENST00000419073 ADAMTS2O95450 1211 aa23.79■■□□□ 1.4
LST1-215ENST00000419073 RPRD2Q5VT52 1461 aaKnown RBP23.79■■□□□ 1.4
LST1-215ENST00000419073 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
LST1-215ENST00000419073 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
LST1-215ENST00000419073 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
LST1-215ENST00000419073 ASXL1Q8IXJ9 1541 aa23.75■■□□□ 1.39
LST1-215ENST00000419073 TMEM131LA2VDJ0 1609 aa23.73■■□□□ 1.39
LST1-215ENST00000419073 APLP2Q06481 763 aa23.73■■□□□ 1.39
LST1-215ENST00000419073 PNPLA6Q8IY17 1366 aa23.73■■□□□ 1.39
LST1-215ENST00000419073 DCCP43146 1447 aa23.73■■□□□ 1.39
LST1-215ENST00000419073 USP21Q9UK80 565 aa23.72■■□□□ 1.39
LST1-215ENST00000419073 PTPRUQ92729 1446 aa23.72■■□□□ 1.39
LST1-215ENST00000419073 GCC2Q8IWJ2 1684 aa23.71■■□□□ 1.39
LST1-215ENST00000419073 MYO5BQ9ULV0 1848 aa23.7■■□□□ 1.39
LST1-215ENST00000419073 MST1RQ04912 1400 aa23.7■■□□□ 1.38
LST1-215ENST00000419073 TRPC5Q9UL62 973 aaPredicted RBP23.7■■□□□ 1.38
LST1-215ENST00000419073 TRPM2O94759 1503 aa23.69■■□□□ 1.38
LST1-215ENST00000419073 ANKRD50Q9ULJ7 1429 aa23.67■■□□□ 1.38
LST1-215ENST00000419073 EP400Q96L91 3159 aa23.67■■□□□ 1.38
LST1-215ENST00000419073 CCDC125Q86Z20 511 aa23.66■■□□□ 1.38
LST1-215ENST00000419073 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
LST1-215ENST00000419073 NHSL1Q5SYE7 1610 aa23.62■■□□□ 1.37
LST1-215ENST00000419073 SETBP1Q9Y6X0 1596 aa23.62■■□□□ 1.37
LST1-215ENST00000419073 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
LST1-215ENST00000419073 FNBP4Q8N3X1 1017 aaPredicted RBP23.61■■□□□ 1.37
LST1-215ENST00000419073 ADGRL2O95490 1459 aa23.61■■□□□ 1.37
LST1-215ENST00000419073 METP08581 1390 aa23.57■■□□□ 1.36
LST1-215ENST00000419073 ZNF326Q5BKZ1 582 aaKnown RBP23.57■■□□□ 1.36
LST1-215ENST00000419073 ADGRL3Q9HAR2 1447 aa23.56■■□□□ 1.36
LST1-215ENST00000419073 UNC13BO14795 1591 aa23.55■■□□□ 1.36
LST1-215ENST00000419073 ATRNO75882 1429 aa23.54■■□□□ 1.36
LST1-215ENST00000419073 ORAI2Q96SN7 254 aa23.54■■□□□ 1.36
LST1-215ENST00000419073 SOS2Q07890 1332 aaPredicted RBP23.54■■□□□ 1.36
LST1-215ENST00000419073 PTCH1Q13635 1447 aa23.53■■□□□ 1.36
LST1-215ENST00000419073 C1orf167Q5SNV9 1468 aa23.53■■□□□ 1.36
LST1-215ENST00000419073 XRN1Q8IZH2 1706 aaKnown RBP23.51■■□□□ 1.35
LST1-215ENST00000419073 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
LST1-215ENST00000419073 E9PCH4 1651 aa23.48■■□□□ 1.35
LST1-215ENST00000419073 NUP155O75694 1391 aa23.46■■□□□ 1.35
LST1-215ENST00000419073 NRXN3Q9Y4C0 1643 aa23.44■■□□□ 1.34
LST1-215ENST00000419073 SF3B2Q13435 895 aaKnown RBP23.44■■□□□ 1.34
LST1-215ENST00000419073 DEFB132Q7Z7B7 95 aa23.44■■□□□ 1.34
LST1-215ENST00000419073 BCL9LQ86UU0 1499 aa23.43■■□□□ 1.34
LST1-215ENST00000419073 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
LST1-215ENST00000419073 ESCO1Q5FWF5 840 aa23.4■■□□□ 1.34
LST1-215ENST00000419073 NALCNQ8IZF0 1738 aa23.39■■□□□ 1.34
LST1-215ENST00000419073 NPHP3Q7Z494 1330 aa23.38■■□□□ 1.33
LST1-215ENST00000419073 LAMC1P11047 1609 aa23.37■■□□□ 1.33
LST1-215ENST00000419073 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
LST1-215ENST00000419073 MYOM2P54296 1465 aa23.36■■□□□ 1.33
LST1-215ENST00000419073 XPCQ01831 940 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms