RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 LTKP29376 864 aa12.4□□□□□ -0.42
CNOT9-203ENST00000418808 SLIT1O75093 1534 aa12.4□□□□□ -0.42
CNOT9-203ENST00000418808 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
CNOT9-203ENST00000418808 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
CNOT9-203ENST00000418808 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
CNOT9-203ENST00000418808 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
CNOT9-203ENST00000418808 NRXN1Q9ULB1 1477 aa12.37□□□□□ -0.43
CNOT9-203ENST00000418808 NRXN3Q9Y4C0 1643 aa12.37□□□□□ -0.43
CNOT9-203ENST00000418808 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
CNOT9-203ENST00000418808 STRCQ7RTU9 1775 aa12.36□□□□□ -0.43
CNOT9-203ENST00000418808 L3MBTL2Q969R5 705 aa12.36□□□□□ -0.43
CNOT9-203ENST00000418808 PPLO60437 1756 aa12.35□□□□□ -0.43
CNOT9-203ENST00000418808 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
CNOT9-203ENST00000418808 KIF1BO60333 1816 aa12.34□□□□□ -0.43
CNOT9-203ENST00000418808 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
CNOT9-203ENST00000418808 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
CNOT9-203ENST00000418808 CCER1Q8TC90 406 aaPredicted RBP12.34□□□□□ -0.43
CNOT9-203ENST00000418808 RIMS2Q9UQ26 1411 aa12.34□□□□□ -0.43
CNOT9-203ENST00000418808 MED14O60244 1454 aa12.34□□□□□ -0.43
CNOT9-203ENST00000418808 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
CNOT9-203ENST00000418808 NUTM2DQ5VT03 806 aaPredicted RBP12.33□□□□□ -0.44
CNOT9-203ENST00000418808 ADAMTS13Q76LX8 1427 aa12.33□□□□□ -0.44
CNOT9-203ENST00000418808 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
CNOT9-203ENST00000418808 POTEHQ6S545 545 aa12.32□□□□□ -0.44
CNOT9-203ENST00000418808 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
CNOT9-203ENST00000418808 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
CNOT9-203ENST00000418808 MYOM2P54296 1465 aa12.31□□□□□ -0.44
CNOT9-203ENST00000418808 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
CNOT9-203ENST00000418808 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
CNOT9-203ENST00000418808 SCAF11Q99590 1463 aaKnown RBP12.29□□□□□ -0.44
CNOT9-203ENST00000418808 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
CNOT9-203ENST00000418808 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
CNOT9-203ENST00000418808 THEMISQ8N1K5 641 aaPredicted RBP12.29□□□□□ -0.44
CNOT9-203ENST00000418808 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
CNOT9-203ENST00000418808 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
CNOT9-203ENST00000418808 RPGRIP1LQ68CZ1 1315 aa12.28□□□□□ -0.44
CNOT9-203ENST00000418808 IQGAP1P46940 1657 aa12.28□□□□□ -0.44
CNOT9-203ENST00000418808 ADGRB1O14514 1584 aa12.27□□□□□ -0.44
CNOT9-203ENST00000418808 PPP1R15AO75807 674 aaPredicted RBP12.27□□□□□ -0.45
CNOT9-203ENST00000418808 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
CNOT9-203ENST00000418808 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
CNOT9-203ENST00000418808 PTPRUQ92729 1446 aa12.27□□□□□ -0.45
CNOT9-203ENST00000418808 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
CNOT9-203ENST00000418808 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
CNOT9-203ENST00000418808 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
CNOT9-203ENST00000418808 METP08581 1390 aa12.25□□□□□ -0.45
CNOT9-203ENST00000418808 IQSEC2Q5JU85 1478 aa12.25□□□□□ -0.45
CNOT9-203ENST00000418808 ALKQ9UM73 1620 aa12.25□□□□□ -0.45
CNOT9-203ENST00000418808 NPHP4O75161 1426 aaPredicted RBP12.24□□□□□ -0.45
CNOT9-203ENST00000418808 ZNF326Q5BKZ1 582 aaKnown RBP12.24□□□□□ -0.45
CNOT9-203ENST00000418808 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
CNOT9-203ENST00000418808 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
CNOT9-203ENST00000418808 STRCP1A6NGW2 1772 aa12.23□□□□□ -0.45
CNOT9-203ENST00000418808 C14orf93Q9H972 538 aaKnown RBP12.23□□□□□ -0.45
CNOT9-203ENST00000418808 TRPM1Q7Z4N2 1603 aa12.22□□□□□ -0.45
CNOT9-203ENST00000418808 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
CNOT9-203ENST00000418808 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
CNOT9-203ENST00000418808 TIMELESSQ9UNS1 1208 aa12.22□□□□□ -0.45
CNOT9-203ENST00000418808 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
CNOT9-203ENST00000418808 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
CNOT9-203ENST00000418808 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
CNOT9-203ENST00000418808 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
CNOT9-203ENST00000418808 RALGAPBQ86X10 1494 aa12.2□□□□□ -0.46
CNOT9-203ENST00000418808 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
CNOT9-203ENST00000418808 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.19□□□□□ -0.46
CNOT9-203ENST00000418808 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
CNOT9-203ENST00000418808 XRN1Q8IZH2 1706 aaKnown RBP12.19□□□□□ -0.46
CNOT9-203ENST00000418808 KIAA1210Q9ULL0 1709 aa12.18□□□□□ -0.46
CNOT9-203ENST00000418808 LTBP4Q8N2S1 1624 aa12.18□□□□□ -0.46
CNOT9-203ENST00000418808 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
CNOT9-203ENST00000418808 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
CNOT9-203ENST00000418808 EID1Q9Y6B2 187 aa12.16□□□□□ -0.46
CNOT9-203ENST00000418808 TECPR2O15040 1411 aa12.16□□□□□ -0.46
CNOT9-203ENST00000418808 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
CNOT9-203ENST00000418808 ROBO2Q9HCK4 1378 aa12.16□□□□□ -0.46
CNOT9-203ENST00000418808 PLEKHH1Q9ULM0 1364 aa12.16□□□□□ -0.46
CNOT9-203ENST00000418808 CHD2O14647 1828 aaKnown RBP12.16□□□□□ -0.46
CNOT9-203ENST00000418808 ZNF335Q9H4Z2 1342 aaPredicted RBP12.14□□□□□ -0.47
CNOT9-203ENST00000418808 YTHDC2Q9H6S0 1430 aaKnown RBP12.14□□□□□ -0.47
CNOT9-203ENST00000418808 LAMC1P11047 1609 aa12.14□□□□□ -0.47
CNOT9-203ENST00000418808 LRPPRCP42704 1394 aaKnown RBP12.14□□□□□ -0.47
CNOT9-203ENST00000418808 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
CNOT9-203ENST00000418808 DISP3Q9P2K9 1392 aa12.13□□□□□ -0.47
CNOT9-203ENST00000418808 KCNA6P17658 529 aa12.12□□□□□ -0.47
CNOT9-203ENST00000418808 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
CNOT9-203ENST00000418808 CPS1P31327 1500 aa12.11□□□□□ -0.47
CNOT9-203ENST00000418808 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
CNOT9-203ENST00000418808 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
CNOT9-203ENST00000418808 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
CNOT9-203ENST00000418808 ARHGEF28Q8N1W1 1705 aaKnown RBP12.11□□□□□ -0.47
CNOT9-203ENST00000418808 DLC1Q96QB1 1528 aa12.11□□□□□ -0.47
CNOT9-203ENST00000418808 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
CNOT9-203ENST00000418808 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
CNOT9-203ENST00000418808 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.1□□□□□ -0.47
CNOT9-203ENST00000418808 LRRC7Q96NW7 1537 aa12.1□□□□□ -0.47
CNOT9-203ENST00000418808 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
CNOT9-203ENST00000418808 SOCS7O14512 581 aa12.08□□□□□ -0.48
CNOT9-203ENST00000418808 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
CNOT9-203ENST00000418808 WAPLQ7Z5K2 1190 aa12.08□□□□□ -0.48
CNOT9-203ENST00000418808 TESK2Q96S53 571 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms