RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ABCC2Q92887 1545 aa15.57■□□□□ 0.08
LIMK1-202ENST00000418310 BLMP54132 1417 aaPredicted RBP15.57■□□□□ 0.08
LIMK1-202ENST00000418310 TRAK1Q9UPV9 953 aa15.57■□□□□ 0.08
LIMK1-202ENST00000418310 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
LIMK1-202ENST00000418310 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
LIMK1-202ENST00000418310 MAST1Q9Y2H9 1570 aa15.56■□□□□ 0.08
LIMK1-202ENST00000418310 CDCA8Q53HL2 280 aa15.55■□□□□ 0.08
LIMK1-202ENST00000418310 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
LIMK1-202ENST00000418310 CANXP27824 592 aaKnown RBP15.55■□□□□ 0.08
LIMK1-202ENST00000418310 GGT6Q6P531 493 aa15.55■□□□□ 0.08
LIMK1-202ENST00000418310 SAFB2Q14151 953 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIMK1-202ENST00000418310 TMEM132EQ6IEE7 984 aa15.55■□□□□ 0.08
LIMK1-202ENST00000418310 UGGT1Q9NYU2 1555 aa15.54■□□□□ 0.08
LIMK1-202ENST00000418310 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
LIMK1-202ENST00000418310 ATP10AO60312 1499 aa15.53■□□□□ 0.08
LIMK1-202ENST00000418310 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
LIMK1-202ENST00000418310 BCL2L13Q9BXK5 485 aa15.52■□□□□ 0.08
LIMK1-202ENST00000418310 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.07
LIMK1-202ENST00000418310 DAXXQ9UER7 740 aaPredicted RBP15.52■□□□□ 0.07
LIMK1-202ENST00000418310 EIF2AK4Q9P2K8 1649 aaKnown RBP15.52■□□□□ 0.07
LIMK1-202ENST00000418310 KANK1Q14678 1352 aa15.51■□□□□ 0.07
LIMK1-202ENST00000418310 ZMYM4Q5VZL5 1548 aa15.51■□□□□ 0.07
LIMK1-202ENST00000418310 SCAF11Q99590 1463 aaKnown RBP15.51■□□□□ 0.07
LIMK1-202ENST00000418310 MS4A1P11836 297 aa15.51■□□□□ 0.07
LIMK1-202ENST00000418310 SLFN5Q08AF3 891 aa15.5■□□□□ 0.07
LIMK1-202ENST00000418310 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.5■□□□□ 0.07
LIMK1-202ENST00000418310 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
LIMK1-202ENST00000418310 SLC12A5Q9H2X9 1139 aa15.5■□□□□ 0.07
LIMK1-202ENST00000418310 PANK1Q8TE04 598 aa15.49■□□□□ 0.07
LIMK1-202ENST00000418310 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
LIMK1-202ENST00000418310 ZCCHC11Q5TAX3 1644 aaKnown RBP15.48■□□□□ 0.07
LIMK1-202ENST00000418310 ABCC1P33527 1531 aa15.48■□□□□ 0.07
LIMK1-202ENST00000418310 MORC1Q86VD1 984 aa15.47■□□□□ 0.07
LIMK1-202ENST00000418310 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
LIMK1-202ENST00000418310 CENPQQ7L2Z9 268 aaPredicted RBP15.47■□□□□ 0.07
LIMK1-202ENST00000418310 CLUAP1Q96AJ1 413 aa15.47■□□□□ 0.07
LIMK1-202ENST00000418310 CLTCL1P53675 1640 aa15.46■□□□□ 0.07
LIMK1-202ENST00000418310 MADDQ8WXG6 1647 aa15.46■□□□□ 0.07
LIMK1-202ENST00000418310 ASXL1Q8IXJ9 1541 aa15.46■□□□□ 0.07
LIMK1-202ENST00000418310 TNNQ9UQP3 1299 aa15.45■□□□□ 0.06
LIMK1-202ENST00000418310 ZNF521Q96K83 1311 aa15.45■□□□□ 0.06
LIMK1-202ENST00000418310 CFAP65Q6ZU64 1925 aaKnown RBP15.45■□□□□ 0.06
LIMK1-202ENST00000418310 KDM2BQ8NHM5 1336 aa15.45■□□□□ 0.06
LIMK1-202ENST00000418310 FANCAO15360 1455 aa15.45■□□□□ 0.06
LIMK1-202ENST00000418310 IGHDP01880 384 aa15.43■□□□□ 0.06
LIMK1-202ENST00000418310 STK26Q9P289 416 aa15.43■□□□□ 0.06
LIMK1-202ENST00000418310 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
LIMK1-202ENST00000418310 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
LIMK1-202ENST00000418310 ZFYVE16Q7Z3T8 1539 aa15.42■□□□□ 0.06
LIMK1-202ENST00000418310 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
LIMK1-202ENST00000418310 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
LIMK1-202ENST00000418310 LAMC1P11047 1609 aa15.42■□□□□ 0.06
LIMK1-202ENST00000418310 NOS1P29475 1434 aa15.41■□□□□ 0.06
LIMK1-202ENST00000418310 C8orf34Q49A92 452 aa15.41■□□□□ 0.06
LIMK1-202ENST00000418310 RNF17Q9BXT8 1623 aaKnown RBP15.41■□□□□ 0.06
LIMK1-202ENST00000418310 TRPM2O94759 1503 aa15.41■□□□□ 0.06
LIMK1-202ENST00000418310 E9PSI1 815 aa15.41■□□□□ 0.06
LIMK1-202ENST00000418310 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
LIMK1-202ENST00000418310 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
LIMK1-202ENST00000418310 WWC1Q8IX03 1113 aa15.4■□□□□ 0.06
LIMK1-202ENST00000418310 NSD3Q9BZ95 1437 aa15.4■□□□□ 0.06
LIMK1-202ENST00000418310 MTHFSP49914 203 aa15.39■□□□□ 0.05
LIMK1-202ENST00000418310 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
LIMK1-202ENST00000418310 TCP11L2Q8N4U5 519 aa15.39■□□□□ 0.05
LIMK1-202ENST00000418310 PTPRTO14522 1441 aa15.38■□□□□ 0.05
LIMK1-202ENST00000418310 PIK3C2GO75747 1445 aa15.38■□□□□ 0.05
LIMK1-202ENST00000418310 ATP7AQ04656 1500 aa15.38■□□□□ 0.05
LIMK1-202ENST00000418310 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
LIMK1-202ENST00000418310 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
LIMK1-202ENST00000418310 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
LIMK1-202ENST00000418310 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
LIMK1-202ENST00000418310 U2AF1L5P0DN76 240 aaPredicted RBP15.38■□□□□ 0.05
LIMK1-202ENST00000418310 U2AF1Q01081 240 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMK1-202ENST00000418310 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
LIMK1-202ENST00000418310 SYNMO15061 1565 aa15.37■□□□□ 0.05
LIMK1-202ENST00000418310 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
LIMK1-202ENST00000418310 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
LIMK1-202ENST00000418310 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
LIMK1-202ENST00000418310 RTEL1-TNFRSF6BF6WH68 1400 aa15.35■□□□□ 0.05
LIMK1-202ENST00000418310 SEC24BO95487 1268 aa15.35■□□□□ 0.05
LIMK1-202ENST00000418310 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
LIMK1-202ENST00000418310 RLBP1P12271 317 aa15.34■□□□□ 0.05
LIMK1-202ENST00000418310 TRMT2AQ8IZ69 625 aaKnown RBP15.34■□□□□ 0.05
LIMK1-202ENST00000418310 INSRP06213 1382 aa15.34■□□□□ 0.05
LIMK1-202ENST00000418310 TSR2Q969E8 191 aaKnown RBP15.34■□□□□ 0.05
LIMK1-202ENST00000418310 PRKCSHP14314 528 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-202ENST00000418310 SLKQ9H2G2 1235 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-202ENST00000418310 GGNBP2Q9H3C7 697 aa15.33■□□□□ 0.04
LIMK1-202ENST00000418310 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
LIMK1-202ENST00000418310 MYOM1P52179 1685 aa15.32■□□□□ 0.04
LIMK1-202ENST00000418310 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
LIMK1-202ENST00000418310 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
LIMK1-202ENST00000418310 CEP152O94986 1710 aa15.32■□□□□ 0.04
LIMK1-202ENST00000418310 FRAT2O75474 233 aaPredicted RBP15.32■□□□□ 0.04
LIMK1-202ENST00000418310 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
LIMK1-202ENST00000418310 ABCA6Q8N139 1617 aa15.32■□□□□ 0.04
LIMK1-202ENST00000418310 ASXL2Q76L83 1435 aa15.32■□□□□ 0.04
LIMK1-202ENST00000418310 RUNDC1Q96C34 613 aa15.31■□□□□ 0.04
LIMK1-202ENST00000418310 ARXQ96QS3 562 aa15.31■□□□□ 0.04
LIMK1-202ENST00000418310 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms