RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
TNFRSF8-203ENST00000417814 ADGRF5Q8IZF2 1346 aa16.93■□□□□ 0.3
TNFRSF8-203ENST00000417814 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
TNFRSF8-203ENST00000417814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
TNFRSF8-203ENST00000417814 MLECQ14165 292 aa16.93■□□□□ 0.3
TNFRSF8-203ENST00000417814 UBE2Q2Q8WVN8 375 aa16.93■□□□□ 0.3
TNFRSF8-203ENST00000417814 MRC2Q9UBG0 1479 aa16.92■□□□□ 0.3
TNFRSF8-203ENST00000417814 SLFN5Q08AF3 891 aa16.92■□□□□ 0.3
TNFRSF8-203ENST00000417814 ATP10BO94823 1461 aa16.92■□□□□ 0.3
TNFRSF8-203ENST00000417814 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF8-203ENST00000417814 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
TNFRSF8-203ENST00000417814 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF8-203ENST00000417814 SMC4Q9NTJ3 1288 aa16.9■□□□□ 0.3
TNFRSF8-203ENST00000417814 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
TNFRSF8-203ENST00000417814 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
TNFRSF8-203ENST00000417814 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
TNFRSF8-203ENST00000417814 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.3
TNFRSF8-203ENST00000417814 RLBP1P12271 317 aa16.89■□□□□ 0.29
TNFRSF8-203ENST00000417814 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
TNFRSF8-203ENST00000417814 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
TNFRSF8-203ENST00000417814 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF8-203ENST00000417814 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
TNFRSF8-203ENST00000417814 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
TNFRSF8-203ENST00000417814 E9PSI1 815 aa16.86■□□□□ 0.29
TNFRSF8-203ENST00000417814 THUMPD2Q9BTF0 503 aaKnown RBP16.86■□□□□ 0.29
TNFRSF8-203ENST00000417814 PCDHB15Q9Y5E8 787 aa16.86■□□□□ 0.29
TNFRSF8-203ENST00000417814 BECN1Q14457 450 aa16.86■□□□□ 0.29
TNFRSF8-203ENST00000417814 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
TNFRSF8-203ENST00000417814 HMOX1P09601 288 aa16.84■□□□□ 0.29
TNFRSF8-203ENST00000417814 LNPKQ9C0E8 428 aa16.84■□□□□ 0.29
TNFRSF8-203ENST00000417814 RALGAPBQ86X10 1494 aa16.84■□□□□ 0.29
TNFRSF8-203ENST00000417814 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
TNFRSF8-203ENST00000417814 RAPGEF6Q8TEU7 1601 aa16.84■□□□□ 0.29
TNFRSF8-203ENST00000417814 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.29
TNFRSF8-203ENST00000417814 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
TNFRSF8-203ENST00000417814 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
TNFRSF8-203ENST00000417814 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
TNFRSF8-203ENST00000417814 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
TNFRSF8-203ENST00000417814 GCC2Q8IWJ2 1684 aa16.82■□□□□ 0.28
TNFRSF8-203ENST00000417814 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
TNFRSF8-203ENST00000417814 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF8-203ENST00000417814 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF8-203ENST00000417814 SCAPERQ9BY12 1400 aa16.81■□□□□ 0.28
TNFRSF8-203ENST00000417814 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
TNFRSF8-203ENST00000417814 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
TNFRSF8-203ENST00000417814 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
TNFRSF8-203ENST00000417814 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
TNFRSF8-203ENST00000417814 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
TNFRSF8-203ENST00000417814 A2MP01023 1474 aa16.79■□□□□ 0.28
TNFRSF8-203ENST00000417814 ARID3AQ99856 593 aa16.78■□□□□ 0.28
TNFRSF8-203ENST00000417814 NAP1L5Q96NT1 182 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF8-203ENST00000417814 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
TNFRSF8-203ENST00000417814 SYNJ2O15056 1496 aa16.77■□□□□ 0.27
TNFRSF8-203ENST00000417814 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.27
TNFRSF8-203ENST00000417814 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.27
TNFRSF8-203ENST00000417814 KDM5CP41229 1560 aa16.76■□□□□ 0.27
TNFRSF8-203ENST00000417814 RAPGEF3O95398 923 aa16.76■□□□□ 0.27
TNFRSF8-203ENST00000417814 FAM135AQ9P2D6 1515 aa16.76■□□□□ 0.27
TNFRSF8-203ENST00000417814 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
TNFRSF8-203ENST00000417814 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 RARSP54136 660 aaKnown RBP16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 RWDD1Q9H446 243 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 RIPK4P57078 832 aa16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 KDM2BQ8NHM5 1336 aa16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 CCDC141Q6ZP82 1450 aa16.75■□□□□ 0.27
TNFRSF8-203ENST00000417814 ANKRD45Q5TZF3 282 aa16.74■□□□□ 0.27
TNFRSF8-203ENST00000417814 RUNDC1Q96C34 613 aa16.74■□□□□ 0.27
TNFRSF8-203ENST00000417814 KANK1Q14678 1352 aa16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 HSP90AB1P08238 724 aaKnown RBP16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 DZIP1LQ8IYY4 767 aaKnown RBP16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
TNFRSF8-203ENST00000417814 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
TNFRSF8-203ENST00000417814 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
TNFRSF8-203ENST00000417814 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
TNFRSF8-203ENST00000417814 MBD5Q9P267 1494 aa16.71■□□□□ 0.26
TNFRSF8-203ENST00000417814 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.26
TNFRSF8-203ENST00000417814 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
TNFRSF8-203ENST00000417814 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
TNFRSF8-203ENST00000417814 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
TNFRSF8-203ENST00000417814 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
TNFRSF8-203ENST00000417814 NECTIN2Q92692 538 aa16.69■□□□□ 0.26
TNFRSF8-203ENST00000417814 CFAP65Q6ZU64 1925 aaKnown RBP16.69■□□□□ 0.26
TNFRSF8-203ENST00000417814 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
TNFRSF8-203ENST00000417814 PKNOX2Q96KN3 472 aa16.69■□□□□ 0.26
TNFRSF8-203ENST00000417814 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
TNFRSF8-203ENST00000417814 MYH16Q9H6N6 1097 aa16.68■□□□□ 0.26
TNFRSF8-203ENST00000417814 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
TNFRSF8-203ENST00000417814 TMEM57Q8N5G2 664 aa16.67■□□□□ 0.26
TNFRSF8-203ENST00000417814 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
TNFRSF8-203ENST00000417814 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
TNFRSF8-203ENST00000417814 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
TNFRSF8-203ENST00000417814 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.26
TNFRSF8-203ENST00000417814 COL17A1Q9UMD9 1497 aaPredicted RBP16.64■□□□□ 0.25
TNFRSF8-203ENST00000417814 TRIM27P14373 513 aa16.64■□□□□ 0.25
TNFRSF8-203ENST00000417814 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms