RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PSEN2P49810 448 aa10.47□□□□□ -0.73
NIFKP3-201ENST00000417799 C3orf80F5H4A9 247 aa10.46□□□□□ -0.73
NIFKP3-201ENST00000417799 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
NIFKP3-201ENST00000417799 ZBED2Q9BTP6 218 aa10.46□□□□□ -0.73
NIFKP3-201ENST00000417799 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
NIFKP3-201ENST00000417799 DNAJB2P25686 324 aa10.44□□□□□ -0.74
NIFKP3-201ENST00000417799 GOPCQ9HD26 462 aa10.44□□□□□ -0.74
NIFKP3-201ENST00000417799 KIAA1468Q9P260 1216 aa10.44□□□□□ -0.74
NIFKP3-201ENST00000417799 SMAPO00193 183 aa10.43□□□□□ -0.74
NIFKP3-201ENST00000417799 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
NIFKP3-201ENST00000417799 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
NIFKP3-201ENST00000417799 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
NIFKP3-201ENST00000417799 PBX2P40425 430 aa10.42□□□□□ -0.74
NIFKP3-201ENST00000417799 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
NIFKP3-201ENST00000417799 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
NIFKP3-201ENST00000417799 SLC4A5Q9BY07 1137 aa10.41□□□□□ -0.74
NIFKP3-201ENST00000417799 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
NIFKP3-201ENST00000417799 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
NIFKP3-201ENST00000417799 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
NIFKP3-201ENST00000417799 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
NIFKP3-201ENST00000417799 PCMTD1Q96MG8 357 aaPredicted RBP10.39□□□□□ -0.75
NIFKP3-201ENST00000417799 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
NIFKP3-201ENST00000417799 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
NIFKP3-201ENST00000417799 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
NIFKP3-201ENST00000417799 BAZ1AQ9NRL2 1556 aaPredicted RBP10.36□□□□□ -0.75
NIFKP3-201ENST00000417799 SKIV2LQ15477 1246 aaKnown RBP10.36□□□□□ -0.75
NIFKP3-201ENST00000417799 CD46P15529 392 aa10.35□□□□□ -0.75
NIFKP3-201ENST00000417799 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
NIFKP3-201ENST00000417799 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
NIFKP3-201ENST00000417799 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
NIFKP3-201ENST00000417799 TBC1D2Q9BYX2 928 aa10.34□□□□□ -0.75
NIFKP3-201ENST00000417799 MYSM1Q5VVJ2 828 aa10.33□□□□□ -0.76
NIFKP3-201ENST00000417799 POLR3EQ9NVU0 708 aa10.33□□□□□ -0.76
NIFKP3-201ENST00000417799 ATP1B4Q9UN42 357 aaPredicted RBP10.33□□□□□ -0.76
NIFKP3-201ENST00000417799 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
NIFKP3-201ENST00000417799 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
NIFKP3-201ENST00000417799 RSF1Q96T23 1441 aaPredicted RBP10.33□□□□□ -0.76
NIFKP3-201ENST00000417799 EIF4G1Q04637 1599 aaKnown RBP10.32□□□□□ -0.76
NIFKP3-201ENST00000417799 RNF166Q96A37 237 aaPredicted RBP10.32□□□□□ -0.76
NIFKP3-201ENST00000417799 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
NIFKP3-201ENST00000417799 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
NIFKP3-201ENST00000417799 SWT1Q5T5J6 900 aaKnown RBP10.31□□□□□ -0.76
NIFKP3-201ENST00000417799 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
NIFKP3-201ENST00000417799 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
NIFKP3-201ENST00000417799 TK2O00142 265 aa10.3□□□□□ -0.76
NIFKP3-201ENST00000417799 RSPH4AQ5TD94 716 aa10.3□□□□□ -0.76
NIFKP3-201ENST00000417799 NUTM1Q86Y26 1132 aa10.3□□□□□ -0.76
NIFKP3-201ENST00000417799 PROCA1Q8NCQ7 364 aaPredicted RBP10.3□□□□□ -0.76
NIFKP3-201ENST00000417799 NBPF3Q9H094 633 aa10.3□□□□□ -0.76
NIFKP3-201ENST00000417799 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
NIFKP3-201ENST00000417799 CLK2P49760 499 aaKnown RBP10.29□□□□□ -0.76
NIFKP3-201ENST00000417799 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
NIFKP3-201ENST00000417799 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
NIFKP3-201ENST00000417799 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
NIFKP3-201ENST00000417799 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
NIFKP3-201ENST00000417799 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
NIFKP3-201ENST00000417799 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
NIFKP3-201ENST00000417799 SLC10A3P09131 477 aa10.25□□□□□ -0.77
NIFKP3-201ENST00000417799 GCGRP47871 477 aa10.25□□□□□ -0.77
NIFKP3-201ENST00000417799 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
NIFKP3-201ENST00000417799 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
NIFKP3-201ENST00000417799 KDM4AO75164 1064 aa10.24□□□□□ -0.77
NIFKP3-201ENST00000417799 FLIIQ13045 1269 aa10.24□□□□□ -0.77
NIFKP3-201ENST00000417799 SLF2Q8IX21 1173 aa10.24□□□□□ -0.77
NIFKP3-201ENST00000417799 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
NIFKP3-201ENST00000417799 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
NIFKP3-201ENST00000417799 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
NIFKP3-201ENST00000417799 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
NIFKP3-201ENST00000417799 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
NIFKP3-201ENST00000417799 SPTLC1O15269 473 aa10.23□□□□□ -0.77
NIFKP3-201ENST00000417799 ZFRQ96KR1 1074 aaKnown RBP10.23□□□□□ -0.77
NIFKP3-201ENST00000417799 PEG3Q9GZU2 1588 aa10.22□□□□□ -0.77
NIFKP3-201ENST00000417799 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
NIFKP3-201ENST00000417799 RSBN1LQ6PCB5 846 aaPredicted RBP10.22□□□□□ -0.77
NIFKP3-201ENST00000417799 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
NIFKP3-201ENST00000417799 WIZO95785 1651 aa10.22□□□□□ -0.77
NIFKP3-201ENST00000417799 NDUFV2P19404 249 aa10.21□□□□□ -0.77
NIFKP3-201ENST00000417799 USP46P62068 366 aa10.21□□□□□ -0.77
NIFKP3-201ENST00000417799 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
NIFKP3-201ENST00000417799 HRO43593 1189 aa10.2□□□□□ -0.78
NIFKP3-201ENST00000417799 RNF40O75150 1001 aa10.2□□□□□ -0.78
NIFKP3-201ENST00000417799 GJA5P36382 358 aa10.2□□□□□ -0.78
NIFKP3-201ENST00000417799 NCAPD3P42695 1498 aa10.2□□□□□ -0.78
NIFKP3-201ENST00000417799 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
NIFKP3-201ENST00000417799 STAC3Q96MF2 364 aa10.2□□□□□ -0.78
NIFKP3-201ENST00000417799 CSPP1Q1MSJ5 1256 aa10.19□□□□□ -0.78
NIFKP3-201ENST00000417799 ZMYND15Q9H091 742 aa10.19□□□□□ -0.78
NIFKP3-201ENST00000417799 HOXA2O43364 376 aa10.18□□□□□ -0.78
NIFKP3-201ENST00000417799 CFHP08603 1231 aa10.17□□□□□ -0.78
NIFKP3-201ENST00000417799 RFC5P40937 340 aa10.17□□□□□ -0.78
NIFKP3-201ENST00000417799 PPP2R2DQ66LE6 453 aa10.17□□□□□ -0.78
NIFKP3-201ENST00000417799 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
NIFKP3-201ENST00000417799 GOLGA8CPA6NN73 597 aa10.16□□□□□ -0.78
NIFKP3-201ENST00000417799 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
NIFKP3-201ENST00000417799 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
NIFKP3-201ENST00000417799 PCDHB15Q9Y5E8 787 aa10.16□□□□□ -0.78
NIFKP3-201ENST00000417799 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
NIFKP3-201ENST00000417799 FDX1P10109 184 aa10.15□□□□□ -0.78
NIFKP3-201ENST00000417799 NECTIN2Q92692 538 aa10.15□□□□□ -0.78
NIFKP3-201ENST00000417799 HMGXB3Q12766 1538 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms