RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 IPO7O95373 1038 aaKnown RBP12.52□□□□□ -0.41
SATB1-204ENST00000417717 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
SATB1-204ENST00000417717 CCP110O43303 1012 aa12.52□□□□□ -0.41
SATB1-204ENST00000417717 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
SATB1-204ENST00000417717 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
SATB1-204ENST00000417717 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
SATB1-204ENST00000417717 MSH5O43196 834 aa12.51□□□□□ -0.41
SATB1-204ENST00000417717 CT47A1Q5JQC4 288 aaPredicted RBP12.5□□□□□ -0.41
SATB1-204ENST00000417717 TTLL5Q6EMB2 1281 aa12.5□□□□□ -0.41
SATB1-204ENST00000417717 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
SATB1-204ENST00000417717 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
SATB1-204ENST00000417717 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
SATB1-204ENST00000417717 RBM25P49756 843 aaKnown RBP12.49□□□□□ -0.41
SATB1-204ENST00000417717 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
SATB1-204ENST00000417717 ERLIN1O75477 346 aa12.49□□□□□ -0.41
SATB1-204ENST00000417717 GAPVD1Q14C86 1478 aa12.49□□□□□ -0.41
SATB1-204ENST00000417717 TMCO5BA8MYB1 307 aa12.49□□□□□ -0.41
SATB1-204ENST00000417717 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
SATB1-204ENST00000417717 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
SATB1-204ENST00000417717 SETSIPP0DME0 302 aa12.47□□□□□ -0.41
SATB1-204ENST00000417717 SARNPP82979 210 aaKnown RBP12.47□□□□□ -0.41
SATB1-204ENST00000417717 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
SATB1-204ENST00000417717 DNAAF4Q8WXU2 420 aa12.47□□□□□ -0.41
SATB1-204ENST00000417717 MCM5P33992 734 aa12.46□□□□□ -0.41
SATB1-204ENST00000417717 TRERF1Q96PN7 1200 aa12.46□□□□□ -0.41
SATB1-204ENST00000417717 KTN1Q86UP2 1357 aaKnown RBP12.46□□□□□ -0.41
SATB1-204ENST00000417717 MNAT1P51948 309 aa12.46□□□□□ -0.41
SATB1-204ENST00000417717 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.41
SATB1-204ENST00000417717 CCDC91Q7Z6B0 441 aa12.46□□□□□ -0.41
SATB1-204ENST00000417717 CAGE1Q8TC20 777 aa12.46□□□□□ -0.41
SATB1-204ENST00000417717 CEP89Q96ST8 783 aa12.46□□□□□ -0.42
SATB1-204ENST00000417717 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
SATB1-204ENST00000417717 ABCA10Q8WWZ4 1543 aa12.46□□□□□ -0.42
SATB1-204ENST00000417717 EXOC6Q8TAG9 804 aa12.45□□□□□ -0.42
SATB1-204ENST00000417717 RALBP1Q15311 655 aa12.45□□□□□ -0.42
SATB1-204ENST00000417717 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
SATB1-204ENST00000417717 CARD11Q9BXL7 1154 aa12.45□□□□□ -0.42
SATB1-204ENST00000417717 SF3A1Q15459 793 aaKnown RBP12.45□□□□□ -0.42
SATB1-204ENST00000417717 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
SATB1-204ENST00000417717 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
SATB1-204ENST00000417717 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
SATB1-204ENST00000417717 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
SATB1-204ENST00000417717 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 ZNF622Q969S3 477 aaKnown RBP eCLIP12.44□□□□□ -0.42
SATB1-204ENST00000417717 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
SATB1-204ENST00000417717 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 TSPY26PQ9H489 355 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 TMCO3Q6UWJ1 677 aa12.44□□□□□ -0.42
SATB1-204ENST00000417717 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
SATB1-204ENST00000417717 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
SATB1-204ENST00000417717 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
SATB1-204ENST00000417717 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
SATB1-204ENST00000417717 PRIMPOLQ96LW4 560 aa12.43□□□□□ -0.42
SATB1-204ENST00000417717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.42
SATB1-204ENST00000417717 NF2P35240 595 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.42
SATB1-204ENST00000417717 CPSF2Q9P2I0 782 aaKnown RBP12.42□□□□□ -0.42
SATB1-204ENST00000417717 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 MYO6Q9UM54 1294 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 KIF2AO00139 706 aaPredicted RBP12.42□□□□□ -0.42
SATB1-204ENST00000417717 TXLNBQ8N3L3 684 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 IFT140Q96RY7 1462 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 RAD54L2Q9Y4B4 1467 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
SATB1-204ENST00000417717 MCM4P33991 863 aa12.41□□□□□ -0.42
SATB1-204ENST00000417717 GOLGA2Q08379 1002 aa12.41□□□□□ -0.42
SATB1-204ENST00000417717 AAMPQ13685 434 aa12.41□□□□□ -0.42
SATB1-204ENST00000417717 BANK1Q8NDB2 785 aa12.41□□□□□ -0.42
SATB1-204ENST00000417717 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
SATB1-204ENST00000417717 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 CHIC2Q9UKJ5 165 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 NPHP1O15259 732 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 FAM184AQ8NB25 1140 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 UBXN4Q92575 508 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 BACH2Q9BYV9 841 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
SATB1-204ENST00000417717 BCCIPQ9P287 314 aaKnown RBP eCLIP12.4□□□□□ -0.43
SATB1-204ENST00000417717 NESP48681 1621 aa12.4□□□□□ -0.43
SATB1-204ENST00000417717 ARHGAP35Q9NRY4 1499 aa12.39□□□□□ -0.43
SATB1-204ENST00000417717 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
SATB1-204ENST00000417717 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
SATB1-204ENST00000417717 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
SATB1-204ENST00000417717 TICAM2Q86XR7 235 aa12.39□□□□□ -0.43
SATB1-204ENST00000417717 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
SATB1-204ENST00000417717 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
SATB1-204ENST00000417717 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
SATB1-204ENST00000417717 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
SATB1-204ENST00000417717 IVLP07476 585 aa12.38□□□□□ -0.43
SATB1-204ENST00000417717 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
SATB1-204ENST00000417717 MICALCLQ6ZW33 695 aa12.38□□□□□ -0.43
SATB1-204ENST00000417717 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms