RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 FAM135BQ49AJ0 1406 aa9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 KCNV2Q8TDN2 545 aa9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 WDR70Q9NW82 654 aa9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 CTTNBP2Q8WZ74 1663 aa9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 CDK13Q14004 1512 aaKnown RBP9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 ABCA6Q8N139 1617 aa9.34□□□□□ -0.91
ECHDC1-206ENST00000417628 RXRBP28702 533 aa9.33□□□□□ -0.92
ECHDC1-206ENST00000417628 LRP5O75197 1615 aa9.33□□□□□ -0.92
ECHDC1-206ENST00000417628 DNMT1P26358 1616 aaKnown RBP9.33□□□□□ -0.92
ECHDC1-206ENST00000417628 RAPGEF6Q8TEU7 1601 aa9.33□□□□□ -0.92
ECHDC1-206ENST00000417628 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
ECHDC1-206ENST00000417628 PLCH2O75038 1416 aa9.31□□□□□ -0.92
ECHDC1-206ENST00000417628 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-206ENST00000417628 NUP153P49790 1475 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 JCADQ9P266 1359 aa9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 PLEKHD1A6NEE1 506 aa9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 TRPC6Q9Y210 931 aa9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 STRCP1A6NGW2 1772 aa9.29□□□□□ -0.92
ECHDC1-206ENST00000417628 MED14O60244 1454 aa9.28□□□□□ -0.92
ECHDC1-206ENST00000417628 LRP6O75581 1613 aa9.28□□□□□ -0.92
ECHDC1-206ENST00000417628 MLH3Q9UHC1 1453 aa9.28□□□□□ -0.92
ECHDC1-206ENST00000417628 ROBO1Q9Y6N7 1651 aa9.27□□□□□ -0.93
ECHDC1-206ENST00000417628 YY1P25490 414 aa9.27□□□□□ -0.93
ECHDC1-206ENST00000417628 RGS12O14924 1447 aa9.27□□□□□ -0.93
ECHDC1-206ENST00000417628 DEPDC5O75140 1603 aa9.27□□□□□ -0.93
ECHDC1-206ENST00000417628 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 CLTCQ00610 1675 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 ANKLE2Q86XL3 938 aa9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 AFAP1Q8N556 730 aa9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 TMEM106CQ9BVX2 250 aa9.26□□□□□ -0.93
ECHDC1-206ENST00000417628 ATAD2Q6PL18 1390 aa9.25□□□□□ -0.93
ECHDC1-206ENST00000417628 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-206ENST00000417628 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-206ENST00000417628 NUTM2DQ5VT03 806 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-206ENST00000417628 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-206ENST00000417628 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
ECHDC1-206ENST00000417628 EFCAB2Q5VUJ9 269 aa9.24□□□□□ -0.93
ECHDC1-206ENST00000417628 ABCC1P33527 1531 aa9.24□□□□□ -0.93
ECHDC1-206ENST00000417628 SPATA31A6Q5VVP1 1343 aa9.24□□□□□ -0.93
ECHDC1-206ENST00000417628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.23□□□□□ -0.93
ECHDC1-206ENST00000417628 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
ECHDC1-206ENST00000417628 SENP3-EIF4A1A0A087X0R7 540 aa9.22□□□□□ -0.93
ECHDC1-206ENST00000417628 HAX1O00165 279 aa9.22□□□□□ -0.93
ECHDC1-206ENST00000417628 E2F4Q16254 413 aa9.22□□□□□ -0.93
ECHDC1-206ENST00000417628 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
ECHDC1-206ENST00000417628 KDM5DQ9BY66 1539 aa9.21□□□□□ -0.93
ECHDC1-206ENST00000417628 ITSN2Q9NZM3 1697 aa9.21□□□□□ -0.93
ECHDC1-206ENST00000417628 POTEHQ6S545 545 aa9.21□□□□□ -0.94
ECHDC1-206ENST00000417628 MYO5CQ9NQX4 1742 aa9.21□□□□□ -0.94
ECHDC1-206ENST00000417628 FGD6Q6ZV73 1430 aa9.2□□□□□ -0.94
ECHDC1-206ENST00000417628 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
ECHDC1-206ENST00000417628 XIRP1Q702N8 1843 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-206ENST00000417628 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
ECHDC1-206ENST00000417628 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
ECHDC1-206ENST00000417628 TNRQ92752 1358 aa9.19□□□□□ -0.94
ECHDC1-206ENST00000417628 ARHGAP5Q13017 1502 aa9.19□□□□□ -0.94
ECHDC1-206ENST00000417628 COL16A1Q07092 1604 aaPredicted RBP9.18□□□□□ -0.94
ECHDC1-206ENST00000417628 MFSD10Q14728 455 aa9.18□□□□□ -0.94
ECHDC1-206ENST00000417628 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-206ENST00000417628 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
ECHDC1-206ENST00000417628 FAM135AQ9P2D6 1515 aa9.18□□□□□ -0.94
ECHDC1-206ENST00000417628 SAMD9Q5K651 1589 aa9.17□□□□□ -0.94
ECHDC1-206ENST00000417628 PDE4AP27815 886 aa9.17□□□□□ -0.94
ECHDC1-206ENST00000417628 THEMISQ8N1K5 641 aaPredicted RBP9.17□□□□□ -0.94
ECHDC1-206ENST00000417628 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
ECHDC1-206ENST00000417628 UGGT1Q9NYU2 1555 aa9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 AFF2P51816 1311 aa9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 TTLL13PA6NNM8 815 aa9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 TIE1P35590 1138 aa9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 KIF14Q15058 1648 aa9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
ECHDC1-206ENST00000417628 ATP7AQ04656 1500 aa9.15□□□□□ -0.94
ECHDC1-206ENST00000417628 CCDC125Q86Z20 511 aa9.15□□□□□ -0.94
ECHDC1-206ENST00000417628 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
ECHDC1-206ENST00000417628 ZC3H13Q5T200 1668 aaKnown RBP9.15□□□□□ -0.94
ECHDC1-206ENST00000417628 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
ECHDC1-206ENST00000417628 SEMA3EO15041 775 aa9.14□□□□□ -0.95
ECHDC1-206ENST00000417628 NLRP1Q9C000 1473 aa9.14□□□□□ -0.95
ECHDC1-206ENST00000417628 PLXNC1O60486 1568 aa9.13□□□□□ -0.95
ECHDC1-206ENST00000417628 TESPA1A2RU30 521 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-206ENST00000417628 EVX2Q03828 476 aa9.13□□□□□ -0.95
ECHDC1-206ENST00000417628 MAP3K1Q13233 1512 aa9.13□□□□□ -0.95
ECHDC1-206ENST00000417628 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
ECHDC1-206ENST00000417628 DDX27Q96GQ7 796 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-206ENST00000417628 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-206ENST00000417628 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
ECHDC1-206ENST00000417628 NGLY1Q96IV0 654 aa9.11□□□□□ -0.95
ECHDC1-206ENST00000417628 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-206ENST00000417628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.954e-7■■□□□ 14.1
ECHDC1-206ENST00000417628 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-206ENST00000417628 PZPP20742 1482 aa9.1□□□□□ -0.95
ECHDC1-206ENST00000417628 GGT6Q6P531 493 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms