RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 PREX1Q8TCU6 1659 aa26.68■■□□□ 1.86
RAB3IP-205ENST00000417413 NRXN1Q9ULB1 1477 aa26.68■■□□□ 1.86
RAB3IP-205ENST00000417413 MLECQ14165 292 aa26.63■■□□□ 1.85
RAB3IP-205ENST00000417413 ADGRF5Q8IZF2 1346 aa26.63■■□□□ 1.85
RAB3IP-205ENST00000417413 TESK2Q96S53 571 aa26.62■■□□□ 1.85
RAB3IP-205ENST00000417413 CLTCQ00610 1675 aaKnown RBP26.61■■□□□ 1.85
RAB3IP-205ENST00000417413 SCAF11Q99590 1463 aaKnown RBP26.6■■□□□ 1.85
RAB3IP-205ENST00000417413 RPGRIP1LQ68CZ1 1315 aa26.59■■□□□ 1.85
RAB3IP-205ENST00000417413 CHGAP10645 457 aaKnown RBP26.59■■□□□ 1.85
RAB3IP-205ENST00000417413 POLR3GLQ9BT43 218 aa26.59■■□□□ 1.85
RAB3IP-205ENST00000417413 PRKRIP1Q9H875 184 aaPredicted RBP26.58■■□□□ 1.85
RAB3IP-205ENST00000417413 MYO5BQ9ULV0 1848 aa26.56■■□□□ 1.84
RAB3IP-205ENST00000417413 SLC52A1Q9NWF4 448 aa26.55■■□□□ 1.84
RAB3IP-205ENST00000417413 DISP3Q9P2K9 1392 aa26.55■■□□□ 1.84
RAB3IP-205ENST00000417413 NEXMIFQ5QGS0 1516 aa26.55■■□□□ 1.84
RAB3IP-205ENST00000417413 ERVK-7P63135 1459 aa26.55■■□□□ 1.84
RAB3IP-205ENST00000417413 CFAP70Q5T0N1 1121 aa26.54■■□□□ 1.84
RAB3IP-205ENST00000417413 TMEM131LA2VDJ0 1609 aa26.54■■□□□ 1.84
RAB3IP-205ENST00000417413 SETBP1Q9Y6X0 1596 aa26.54■■□□□ 1.84
RAB3IP-205ENST00000417413 IDI1Q13907 227 aa26.54■■□□□ 1.84
RAB3IP-205ENST00000417413 PIK3C2GO75747 1445 aa26.53■■□□□ 1.84
RAB3IP-205ENST00000417413 SCAF1Q9H7N4 1312 aaKnown RBP26.52■■□□□ 1.84
RAB3IP-205ENST00000417413 TMF1P82094 1093 aa26.49■■□□□ 1.83
RAB3IP-205ENST00000417413 FBXO31Q5XUX0 539 aaPredicted RBP26.49■■□□□ 1.83
RAB3IP-205ENST00000417413 SPATA31D1Q6ZQQ2 1576 aa26.49■■□□□ 1.83
RAB3IP-205ENST00000417413 EIF3AQ14152 1382 aaKnown RBP26.47■■□□□ 1.83
RAB3IP-205ENST00000417413 ZMYM3Q14202 1370 aa26.47■■□□□ 1.83
RAB3IP-205ENST00000417413 C14orf93Q9H972 538 aaKnown RBP26.47■■□□□ 1.83
RAB3IP-205ENST00000417413 MYO3AQ8NEV4 1616 aa26.46■■□□□ 1.83
RAB3IP-205ENST00000417413 ADGRB1O14514 1584 aa26.45■■□□□ 1.82
RAB3IP-205ENST00000417413 ZFYVE9O95405 1425 aa26.45■■□□□ 1.82
RAB3IP-205ENST00000417413 CCDC184Q52MB2 194 aa26.43■■□□□ 1.82
RAB3IP-205ENST00000417413 VGFO15240 615 aaPredicted RBP26.42■■□□□ 1.82
RAB3IP-205ENST00000417413 PER1O15534 1290 aaPredicted RBP26.36■■□□□ 1.81
RAB3IP-205ENST00000417413 NUTM2DQ5VT03 806 aaPredicted RBP26.35■■□□□ 1.81
RAB3IP-205ENST00000417413 GTF3C3Q9Y5Q9 886 aa26.35■■□□□ 1.81
RAB3IP-205ENST00000417413 KDM5AP29375 1690 aaKnown RBP26.34■■□□□ 1.81
RAB3IP-205ENST00000417413 MYOM1P52179 1685 aa26.34■■□□□ 1.81
RAB3IP-205ENST00000417413 CDCA8Q53HL2 280 aa26.33■■□□□ 1.81
RAB3IP-205ENST00000417413 KTN1Q86UP2 1357 aaKnown RBP26.33■■□□□ 1.81
RAB3IP-205ENST00000417413 SBNO2Q9Y2G9 1366 aa26.33■■□□□ 1.81
RAB3IP-205ENST00000417413 MRS2Q9HD23 443 aa26.32■■□□□ 1.8
RAB3IP-205ENST00000417413 STAG3Q9UJ98 1225 aa26.32■■□□□ 1.8
RAB3IP-205ENST00000417413 A2ML1A8K2U0 1454 aa26.32■■□□□ 1.8
RAB3IP-205ENST00000417413 SLC24A1O60721 1099 aa26.32■■□□□ 1.8
RAB3IP-205ENST00000417413 QRICH2Q9H0J4 1663 aa26.31■■□□□ 1.8
RAB3IP-205ENST00000417413 TNRQ92752 1358 aa26.31■■□□□ 1.8
RAB3IP-205ENST00000417413 TMEM132EQ6IEE7 984 aa26.3■■□□□ 1.8
RAB3IP-205ENST00000417413 ARHGEF28Q8N1W1 1705 aaKnown RBP26.3■■□□□ 1.8
RAB3IP-205ENST00000417413 PANK3Q9H999 370 aa26.29■■□□□ 1.8
RAB3IP-205ENST00000417413 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
RAB3IP-205ENST00000417413 RALBP1Q15311 655 aa26.28■■□□□ 1.8
RAB3IP-205ENST00000417413 CENPJQ9HC77 1338 aaPredicted RBP26.27■■□□□ 1.8
RAB3IP-205ENST00000417413 TRAK1Q9UPV9 953 aa26.27■■□□□ 1.8
RAB3IP-205ENST00000417413 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
RAB3IP-205ENST00000417413 PARD3Q8TEW0 1356 aa26.26■■□□□ 1.79
RAB3IP-205ENST00000417413 FER1L4A9Z1Z3 1794 aa26.24■■□□□ 1.79
RAB3IP-205ENST00000417413 ALKQ9UM73 1620 aa26.23■■□□□ 1.79
RAB3IP-205ENST00000417413 MYBBP1AQ9BQG0 1328 aaKnown RBP26.22■■□□□ 1.79
RAB3IP-205ENST00000417413 NLRP1Q9C000 1473 aa26.21■■□□□ 1.79
RAB3IP-205ENST00000417413 RIMS2Q9UQ26 1411 aa26.21■■□□□ 1.79
RAB3IP-205ENST00000417413 CEBPAP49715 358 aaPredicted RBP26.21■■□□□ 1.79
RAB3IP-205ENST00000417413 HDGFP51858 240 aaKnown RBP26.2■■□□□ 1.78
RAB3IP-205ENST00000417413 FAM9BQ8IZU0 186 aa26.19■■□□□ 1.78
RAB3IP-205ENST00000417413 SETD1AO15047 1707 aaKnown RBP26.18■■□□□ 1.78
RAB3IP-205ENST00000417413 BRD4O60885 1362 aaPredicted RBP26.18■■□□□ 1.78
RAB3IP-205ENST00000417413 HNRNPUQ00839 825 aaKnown RBP eCLIP26.17■■□□□ 1.78
RAB3IP-205ENST00000417413 UBR1Q8IWV7 1749 aa26.17■■□□□ 1.78
RAB3IP-205ENST00000417413 C3P01024 1663 aa26.16■■□□□ 1.78
RAB3IP-205ENST00000417413 ADAMTSL3P82987 1691 aa26.15■■□□□ 1.78
RAB3IP-205ENST00000417413 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.15■■□□□ 1.78
RAB3IP-205ENST00000417413 PLPPR3Q6T4P5 718 aa26.14■■□□□ 1.77
RAB3IP-205ENST00000417413 PTPRMP28827 1452 aa26.13■■□□□ 1.77
RAB3IP-205ENST00000417413 YTHDC2Q9H6S0 1430 aaKnown RBP26.13■■□□□ 1.77
RAB3IP-205ENST00000417413 NRXN3Q9Y4C0 1643 aa26.13■■□□□ 1.77
RAB3IP-205ENST00000417413 CC2D1BQ5T0F9 858 aaKnown RBP26.12■■□□□ 1.77
RAB3IP-205ENST00000417413 TMC1Q8TDI8 760 aa26.12■■□□□ 1.77
RAB3IP-205ENST00000417413 PNISRQ8TF01 805 aaKnown RBP26.12■■□□□ 1.77
RAB3IP-205ENST00000417413 TULP4Q9NRJ4 1543 aa26.12■■□□□ 1.77
RAB3IP-205ENST00000417413 AMER1Q5JTC6 1135 aaPredicted RBP26.1■■□□□ 1.77
RAB3IP-205ENST00000417413 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
RAB3IP-205ENST00000417413 KNSTRNQ9Y448 316 aa26.1■■□□□ 1.77
RAB3IP-205ENST00000417413 NLRP13Q86W25 1043 aa26.1■■□□□ 1.77
RAB3IP-205ENST00000417413 RIMS1Q86UR5 1692 aaKnown RBP26.09■■□□□ 1.77
RAB3IP-205ENST00000417413 NPC1L1Q9UHC9 1359 aa26.09■■□□□ 1.77
RAB3IP-205ENST00000417413 PUS7Q96PZ0 661 aaKnown RBP26.08■■□□□ 1.77
RAB3IP-205ENST00000417413 STK26Q9P289 416 aa26.08■■□□□ 1.77
RAB3IP-205ENST00000417413 THEMISQ8N1K5 641 aaPredicted RBP26.06■■□□□ 1.76
RAB3IP-205ENST00000417413 LRPPRCP42704 1394 aaKnown RBP26.06■■□□□ 1.76
RAB3IP-205ENST00000417413 DLC1Q96QB1 1528 aa26.04■■□□□ 1.76
RAB3IP-205ENST00000417413 EVC2Q86UK5 1308 aa26.04■■□□□ 1.76
RAB3IP-205ENST00000417413 TMEM2Q9UHN6 1383 aa26.04■■□□□ 1.76
RAB3IP-205ENST00000417413 CARD14Q9BXL6 1004 aa26.03■■□□□ 1.76
RAB3IP-205ENST00000417413 EID1Q9Y6B2 187 aa26.02■■□□□ 1.76
RAB3IP-205ENST00000417413 ZBED9Q6R2W3 1325 aa26.02■■□□□ 1.76
RAB3IP-205ENST00000417413 PRAM1Q96QH2 718 aa25.99■■□□□ 1.75
RAB3IP-205ENST00000417413 SAFB2Q14151 953 aaKnown RBP eCLIP25.98■■□□□ 1.75
RAB3IP-205ENST00000417413 SLC12A5Q9H2X9 1139 aa25.98■■□□□ 1.75
RAB3IP-205ENST00000417413 KNDC1Q76NI1 1749 aa25.97■■□□□ 1.75
RAB3IP-205ENST00000417413 USP32Q8NFA0 1604 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms